Mus pahari (shrew mouse): 110327777
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Entry
110327777 CDS
T05929
Symbol
Exosc7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110327777 (Exosc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110327777 (Exosc7)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110327777 (Exosc7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
110327777 (Exosc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
110327777
NCBI-ProteinID:
XP_021062636
Ensembl:
MGP_PahariEiJ_G0015720
LinkDB
All DBs
Position
10:115878445..115901172
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AA seq
291 aa
AA seq
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MASVALSEAEKVYIVHGVQEDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILV
GVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNNKSSVD
LRSLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDEEGAKDI
ELSDDPYDCIRLSVENVPCIVTLCKIGCRHVVDATLQEEACSLASLLVSVTSKGVVTCMR
KVGKGSLDPESIFEMMESSKRVGKVLHVSLQSLLHKEESLGPKRPRVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggtggcgctgagcgaggccgagaaggtctacatcgttcatggagtgcaggaa
gaccttcgggtggatggccgtggctgtgaggactaccgatgtgttgaagtagagactgat
gtggtgtctaacaccagtgggtctgccagagtcaagctgggtcacacagacatcttggtg
ggagtgaaagcagaaatggggacaccgaagctggagaaaccaaatgaaggctacctggag
ttctttgttgactgttcagccaacgctaccccagaatttgaagggcgaggaggtgatgac
cttggcacagagattgctaacaccctctaccggatatttaacaacaagagcagtgtagac
ctgaggtccctctgcatcagtcctcgggagcactgctgggttctctatgtggatgtgctg
ctgctggaatgtggtgggaatttgtttgatgctatttccattgctgtaaaagctgctctc
ttcaacacaaggataccaagggttcgtgttctggaggatgaagagggggcaaaggacatt
gagctgtctgacgatccttatgactgcatccgactgagtgtagagaatgtcccctgcatt
gtcaccctgtgcaagattggctgccggcatgtggtagatgccacacttcaagaggaggcc
tgttccctggccagcttgctggtgtcagtgaccagcaagggagtcgtgacatgcatgagg
aaagtggggaaaggaagcctggatcctgagagcatcttcgagatgatggagagcagcaag
cgagtgggcaaggtgctgcatgtgtccttgcagagccttctgcacaaggaagaaagcctg
gggcccaagaggccgagagtcgggttcctggggtga
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integrated database retrieval system