KEGG   Mus pahari (shrew mouse): 110327777
Entry
110327777         CDS       T05929                                 
Symbol
Exosc7
Name
(RefSeq) exosome complex component RRP42
  KO
K12589  exosome complex component RRP42
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110327777 (Exosc7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpah03019]
    110327777 (Exosc7)
Messenger RNA biogenesis [BR:mpah03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     110327777 (Exosc7)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     110327777 (Exosc7)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 110327777
NCBI-ProteinID: XP_021062636
Ensembl: MGP_PahariEiJ_G0015720
LinkDB
Position
10:115878445..115901172
AA seq 291 aa
MASVALSEAEKVYIVHGVQEDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILV
GVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNNKSSVD
LRSLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDEEGAKDI
ELSDDPYDCIRLSVENVPCIVTLCKIGCRHVVDATLQEEACSLASLLVSVTSKGVVTCMR
KVGKGSLDPESIFEMMESSKRVGKVLHVSLQSLLHKEESLGPKRPRVGFLG
NT seq 876 nt   +upstreamnt  +downstreamnt
atggcgtcggtggcgctgagcgaggccgagaaggtctacatcgttcatggagtgcaggaa
gaccttcgggtggatggccgtggctgtgaggactaccgatgtgttgaagtagagactgat
gtggtgtctaacaccagtgggtctgccagagtcaagctgggtcacacagacatcttggtg
ggagtgaaagcagaaatggggacaccgaagctggagaaaccaaatgaaggctacctggag
ttctttgttgactgttcagccaacgctaccccagaatttgaagggcgaggaggtgatgac
cttggcacagagattgctaacaccctctaccggatatttaacaacaagagcagtgtagac
ctgaggtccctctgcatcagtcctcgggagcactgctgggttctctatgtggatgtgctg
ctgctggaatgtggtgggaatttgtttgatgctatttccattgctgtaaaagctgctctc
ttcaacacaaggataccaagggttcgtgttctggaggatgaagagggggcaaaggacatt
gagctgtctgacgatccttatgactgcatccgactgagtgtagagaatgtcccctgcatt
gtcaccctgtgcaagattggctgccggcatgtggtagatgccacacttcaagaggaggcc
tgttccctggccagcttgctggtgtcagtgaccagcaagggagtcgtgacatgcatgagg
aaagtggggaaaggaagcctggatcctgagagcatcttcgagatgatggagagcagcaag
cgagtgggcaaggtgctgcatgtgtccttgcagagccttctgcacaaggaagaaagcctg
gggcccaagaggccgagagtcgggttcctggggtga

DBGET integrated database retrieval system