Mus pahari (shrew mouse): 110327805
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Entry
110327805 CDS
T05929
Symbol
Dcaf1
Name
(RefSeq) DDB1- and CUL4-associated factor 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
110327805 (Dcaf1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mpah01001
]
110327805 (Dcaf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mpah04121
]
110327805 (Dcaf1)
Enzymes [BR:
mpah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
110327805 (Dcaf1)
Protein kinases [BR:
mpah01001
]
Serine/threonine kinases: Other
Other
110327805 (Dcaf1)
Ubiquitin system [BR:
mpah04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110327805 (Dcaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
110327805
NCBI-ProteinID:
XP_021062684
Ensembl:
MGP_PahariEiJ_G0015503
LinkDB
All DBs
Position
10:100345245..100387264
Genome browser
AA seq
1424 aa
AA seq
DB search
MIDILLVNAYVMTSREPPLNTAACRLLLDIMPGLETAVVFQEKEGIVENLFKWAREADQP
LRTYSTGLLGGAMENQDIAANYRDENSQLVAIVLRRLRELQLQEVTLRQDSKRPSPRKLS
SEPLLPLDEEAVDMDYGDMAVDVVDGEQESSRDMEISFRLDSSHKTSSRVNSATKPEEGG
LKKNKSAKHGDRENFRKAKQKLGFSSSDPDRVFVELSNSSWSEMSPWVIGTNYTLYPMTP
AIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMFYIDLKQTNDVLLTFEALKHLASLLL
HNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYNQDAMERVCMHPHNVLSDVVN
YTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRYDGLRRLVNLISTLEILNLEDQGA
LLSDDEIFASRQTGKHTCMALRKYFEAHLAIKLEQVKQSLQRTEGGILVHPQPPYKACSY
THEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLLLQLISIACNWKTYYARNDTVRFA
LDVLAILTVVPKIQLQLAESVDVLDEAGSTVSTVGISIILGVAEGEFFIHDAEIQKSALQ
IIINCVCGPDNRISSIGKFISGTPRRKLSQAPKSSEHTLAKMWNVVQSNNGIKVLLSLLS
IKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSSCQIQQLMKEPVLQDKRSDHV
KFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRISFPEKELLLLIRNHLISKGL
GETATVLTREADLPMTAASHSSAFTPVTAAASPVSLPRTPRIANGIASRLGSHAAVGASA
PSAPPAHPPPRPPQGSLALPGPSYAGNSPLIGRISFIRERPSPCNGRKIRVLRQKSDHGA
YSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVATCPPFSLFTPHQCPEPKQR
RQAPINFTSRLNRRASFPKYGGVDGGCFDRHLIFSRFRPISVFREANEDESGFTCCAFSA
RERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHLEPSRDGSLLLTSATWSQPLSAL
WGMKSVFDMKHSFTEDHYVEFSKHSQDRVIGTKGDIAHIYDIQTGNKLLTLFNPDLANNY
KRNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMNISGVFHPNGLEVIINTEIWDLR
TFHLLHTVPALDQCRVVFNHTGTVMYGAMLQADDEDDLLEERMKSPFGSSFRTFNATDYK
PIATIDVKRNIFDLCTDTKDCYLAVIENQGSMDALNMDTVCRLYEVGRQRLAEDEDEEED
QEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFSPSDEELAN
LLEEGEEGEDEDSDADEEVELILGDTDSSDNSDLEDDIILSLNE
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacatcctgctggtaaatgcgtatgtgatgacaagtagagaaccccctttaaac
actgcggcttgcagactgctcctggacatcatgccgggcctagaaactgctgttgtcttt
caagaaaaggaaggaattgttgaaaatcttttcaaatgggcccgagaggctgatcagcca
cttaggacatattctactggactgctgggaggtgctatggaaaatcaagatattgctgcc
aactacagagatgaaaattcacagttggtggcaatagtgcttagaagactgagggagctc
cagcttcaagaagtgactttgcggcaggacagtaagcgtcctagtccacggaagctctct
tcggaaccccttttgcctctggatgaggaagctgtggatatggactatggtgacatggca
gtagatgttgtggatggagaacaagaatcttctagagatatggagatctcctttcgtctt
gattcaagtcacaagaccagtagtagagtgaactcggcaactaaacctgaggaaggagga
ttaaagaaaaacaagtctgcaaagcatggtgacagagagaactttaggaaggccaagcag
aagttgggcttctcatcttctgacccagatcgtgtgtttgttgagctgtctaatagcagc
tggtcagaaatgtccccctgggtgattggcaccaattacactctctatcctatgactcct
gctattgagcagcgacttattcttcagtatttgacccctttaggagagtatcaggagtta
cttcccatattcatgcaacttggatcaagagaattgatgatgttttatattgatctgaaa
cagactaatgatgtcctgcttacttttgaggcactcaagcatctagcatctctcctgctt
cataacaaatttgctacagaatttgttgcacatggtggagtacagaaattactggaaatt
ccgcgtccttctatggctgcaactggtgtgtccatgtgcttgtattacctgtcctacaac
caggatgctatggaaagagtttgcatgcatcctcacaatgttctatctgatgtggtgaac
tataccctatggttaatggaatgttctcatgcttcaggatgttgccatgctactatgttt
ttctcaatttgtttctcattccgggctgttttggagctctttgaccgttatgatggtctt
cgtcgtctggtgaacttgatcagcactttggagattttaaatttggaagaccagggtgca
cttttgagtgatgatgaaatatttgctagtcgccaaacaggaaaacatacctgcatggct
ctgcgcaagtattttgaggctcacctggccattaaattggaacaagtcaagcagtcactt
cagaggactgagggtggtattcttgttcacccccagcctccatacaaggcatgctcatat
actcatgagcagattgtggaaatgatggaatttttgatagagtatggcccagctcagcta
tattgggaacctgctgaagtcttcctcaagctttcctgtgtgcagcttttactacagctt
atttccatcgcctgcaattggaaaacctattatgcaaggaacgacactgtgcgttttgct
ttggatgtccttgctattcttactgttgtgccaaaaatccagctccagttggcagagtca
gtggatgtactagacgaggctggctctactgtctccactgtaggtatcagcattattttg
ggcgtggctgagggtgagttctttatccatgatgctgaaattcagaagtcagcacttcaa
attatcatcaattgtgtctgtggtccagataaccgaatatccagtattggcaaatttatt
tctggaactcctcggagaaagctgtctcaggctcccaagagcagtgagcatactctggcc
aagatgtggaatgtggtccagtccaacaatggcatcaaggtgcttctgtccctattgtcc
atcaagatgcccattacagatgcagaccagatccgtgcactggcttgcaaagcccttgta
ggcctgtctcgaagtagcactgttcgacagatcatcagtaaacttcccctttttagtagc
tgccagattcaacagcttatgaaggaacctgtgttgcaggataagcgcagtgaccatgtc
aagttctgcaaatacgccgctgagctcattgagcgtgtatcaggaaagcctcttctcatt
ggcactgatgtgtctctcgcacgactgcagaaagcagatgttgttgctcagtcaaggatc
tccttccctgagaaagagctgctcctgttgatacggaaccatctcatttctaaagggctt
ggagagacagcaactgtactgacgagagaggctgacctgcccatgactgctgcctcacat
tcttctgccttcaccccagtgactgctgctgcttctcctgtctctcttccccggacccct
cggattgccaatggcattgcaagtcgactgggcagccatgctgctgtgggtgcttctgcc
ccttctgctccccctgcccatcctccaccacgccccccccagggttcattggctttgcct
ggcccatcatatgcaggcaattcccctttgattggtagaatcagttttatcagagagagg
ccgtcaccgtgcaatggcaggaaaattcgagtgttgcggcagaagtcagaccatggtgca
tacagccagagccctgccataaaaaaacaattggatagacatcttccttccccacctacg
ctggacagtatcatcacagagtatcttagagagcaacatgctcgatgcaagaaccccgtt
gccacctgtcctcctttttctctctttactcctcatcagtgtcctgaaccaaaacagagg
cggcaagcgccaataaactttacctcaaggctaaaccgcagggcatcatttccaaaatat
ggaggggtggatggcggatgctttgataggcaccttatctttagcagatttcgtccgatt
tcagtattccgggaagctaatgaagatgaaagtggcttcacctgttgtgcattctcagcc
cgggagcggttcctgatgcttggcacttgtacagggcagctgaagctctacaatgtgttt
agtggacaggaagaggccagctataactgtcacaactcagccatcacacaccttgaaccg
tcaagggatgggtccttacttctgacatctgccacttggagtcagcctttgtctgcactt
tgggggatgaaatcagtatttgatatgaagcattccttcacagaagatcactatgttgag
ttcagtaagcactctcaggatcgggtcataggcacaaaaggagacattgcccatatttat
gatattcagactggcaacaagctgttgactctgtttaacccagatcttgccaacaactac
aagaggaactgtgccacctttaatcctacagatgatcttgtcttaaatgatggcgtcctc
tgggatgtccgctctgcacaggccatccacaagtttgacaagttcaacatgaatatcagt
ggtgttttccatccaaatgggctggaagtcatcatcaatacagagatttgggaccttcgg
actttccatcttttacacactgttcctgctctggatcaatgccgtgtggtgtttaaccac
actgggacagtgatgtatggagcaatgctgcaggcagatgatgaagatgacttactggaa
gagaggatgaaaagcccttttgggtcatcctttcgaacattcaatgcaactgattataaa
cctatagcaactattgatgtgaaacgaaacatctttgacctgtgcacagacaccaaagac
tgttatcttgctgtcattgagaatcaaggcagcatggatgcactgaatatggacacagta
tgcaggctttatgaagtgggtaggcagcgtctggcagaggatgaggatgaagaggaggac
caggaagaggaagaacaggaggaggaagatgatgatgaagatgatgatgatactgatgat
ttagatgaactagacactgaccagttgctggaggcagaactggaggaggatgacaacaat
gagaatgcaggagaggatggagacaatgacttctctccctctgatgaagagttagcaaac
cttctagaggagggagaggagggggaagatgaagactctgatgcagatgaggaggtggag
ctgatcctgggggacacagacagctcagacaactctgatttggaagatgacatcatctta
tctctgaatgagtga
DBGET
integrated database retrieval system
