Mus pahari (shrew mouse): 110328390
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Entry
110328390 CDS
T05929
Symbol
Ddx43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mpah03041
]
110328390 (Ddx43)
Enzymes [BR:
mpah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110328390 (Ddx43)
Spliceosome [BR:
mpah03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110328390 (Ddx43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
110328390
NCBI-ProteinID:
XP_021063478
Ensembl:
MGP_PahariEiJ_G0015333
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All DBs
Position
10:73077057..73105617
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AA seq
645 aa
AA seq
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MSRREPAANASSSGVAPRRSSTGSRGADRKATEETNRRGRVRSRGAGGGWREPAGAAEAT
AAGRHEPPLCFGVKNDVVGAVIGERGRRPGSLRDGAAGVGAPAARGRGSVAGRGVCGREP
PGRLARRPRTYFKANFVKNLLTDIIAFQPTVGADTSTSESVTDDQPLIDWDQIREDALKW
EKKKWADLPPIKKNFYIESATTSSMSQVQIDNWRKENFNVTCDDLKDGEKRPIPNPICKF
EDAFQSYPEVMKNIKRAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLSYLMPGFIH
LDSQPLAREQRNGPGMLVLTPTRELALQVEAECSKYSYGDLKSVCVYGGGDRDGQIQDVS
KGVDIIIATPGRLNDLQMNNFVNLKSVTYLVLDEADKMLDMGFEPQIMKILLDVRPDRQT
IMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVNSVKQDIIITTEEEKRTHIQTFLEN
MSPKDKVIVFVSRKAVADHLSSDLILRHISVESLHGNREQSDREKALENFKTGKVRILIA
TDLASRGLDVHDITHVYNYDFPRNIEEYVHRVGRTGRAGRTGMSITLITRNDWRVATELI
NILERANQNIPEELVLMAERYKANKLKREMEKKMGRPQGKPQKFY
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggcgggaacccgcagccaacgcttcctcctcgggcgttgctccccggcgaagc
tcgaccgggtcccggggcgccgaccggaaggcgacggaggagacgaaccggagaggccgg
gtccgtagcaggggtgcgggcggcggctggagggagcccgccggtgccgccgaggctacg
gccgccggccgccacgaaccgccgctctgcttcggggtgaagaacgacgtggtgggcgcg
gtgataggtgagcgcgggcggcgcccaggctcgctgcgtgacggggcagcgggcgtcggg
gctccagcagcgcgggggcgcggttctgtggcgggccggggcgtgtgcgggagagaacct
cctggaagactcgcgcggcgtccgcggacctacttcaaagctaattttgtcaaaaatctt
ttaacagatattattgcattccaacctactgtcggagcagataccagcacaagtgagagt
gtaacagacgatcagccattgatagattgggatcaaattcgagaagatgctttgaaatgg
gaaaagaaaaagtgggcagatttacctccaattaagaaaaacttttacatagagtcagca
acgacaagctcaatgtcacaagtgcagatagacaactggaggaaagaaaattttaatgta
acatgtgatgacttgaaagatggtgagaagcgccctatccccaaccctatatgtaaattc
gaagatgcctttcaaagttacccagaagttatgaaaaacattaaaagagcaggctttcaa
aaacctacaccgattcagtcacaggcatggccaatagttctgcaaggaatagatcttatt
ggagtagcacaaactggaacagggaagacactgtcctatttaatgcctggatttattcat
ctagactctcaaccactagctagagaacaaagaaatgggcctggcatgttagtccttacg
cccacccgggaattagcccttcaagtagaagctgaatgttctaaatattcatatggtgat
cttaaaagtgtttgtgtatatggtggtggtgatagagatggacaaatacaagatgtttca
aaaggtgtagacatcattattgcaactcctggaagattgaatgacctacaaatgaataac
tttgtcaatctgaaaagtgtaacctatttggttttagatgaagcagacaagatgctggac
atgggatttgaaccccagataatgaagattttgttagatgtacgcccagaccggcagact
attatgacaagcgctacttggccatacgccgtccgccgtcttgcacaatcttatttgaaa
gaaccaatgattgtctatgttggtactttggatctagttgctgtaaattcagtgaaacaa
gatataatcattaccacagaagaagagaaacgaactcatatccagaccttccttgagaat
atgtcacctaaagacaaagtcattgtctttgtcagcagaaaagccgttgctgatcactta
tcaagtgatctgatactccgacacatatcagtggagtctctgcatggcaacagagaacag
agtgaccgagagaaagcgttagagaactttaagacaggtaaagtgagaatacttattgct
actgacttggcatctcgaggtcttgatgtccatgatatcactcacgtctacaattatgat
tttccacggaacattgaagaatacgtacacagagtaggacgcactgggagagcagggcgc
actggaatgtcaattacccttatcacaagaaatgattggagggttgccactgaattgatt
aatattctggaaagagcaaatcagaatatcccagaggaacttgtcttaatggctgagaga
tacaaagcaaataaactaaaaagagagatggaaaaaaaaatgggaagacctcaaggaaag
ccccagaagttttactaa
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