Mus pahari (shrew mouse): 110328923
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Entry
110328923 CDS
T05929
Symbol
Cdh12
Name
(RefSeq) cadherin-12 isoform X1
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mpah04515
]
110328923 (Cdh12)
Cell adhesion molecules [BR:
mpah04515
]
Cadherins
Major cadherins
110328923 (Cdh12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
Stevor
Cadherin_4
DUF443
TMEM154
Motif
Other DBs
NCBI-GeneID:
110328923
NCBI-ProteinID:
XP_021064048
Ensembl:
MGP_PahariEiJ_G0016067
LinkDB
All DBs
Position
11:65870646..66904998
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AA seq
794 aa
AA seq
DB search
MLTRNSLYLLLWILFDGGLLTPLQPQPQQTLATEPKENVIRLLGRRSHFQRVKRGWVWNQ
FFVLEEYMGSEPQYVGKLHSDLDKGEGTVKYTLSGDGAGTVFTIDETTGDIHAIRSLDRE
EKPFYTLRAQAVDIETRKPLEPESEFIIKVQDINDNEPKFLDGPYVASVPEMSPVGAYVL
QVKATDADDPTYGNSARVVYSILQGQPYFSIDPKTGVIKTALPNMDREVKEQYQVLIQAK
DMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPESSPVGSAIGRIRAVDPDFGK
NAEIEYNIVPGDGGNLFDIVTDEDTQEGIIKLKKPLDFETKKAYTFKVEASNLHLDHRFH
SAGPFKDTATVKISVLDVDEPPVFSKPLYTMEVYEDTPVGTIIGAVTAQDLDVGSSAVRY
FIDWKSDGESYFTIDGTEGTIATNELLDRENTAQYNFSIIASKVSNPLLTSKVNILINVL
DVNEFPPEISVPYETAVCENAKPGQIIQIVGAVDRDLSPAGQKFSFRLAPEAVIKPNFTV
HDFRNNTAGIETRRNGYSRRQQELYFLPIVIEDSSYPVQSSTNTMTIRVCRCDSDGTILS
CNVEAIFLPVGLSTGALIAILLCIVILLAIVVLYVALRRQRKKDTLMTSKEDIRDNVIHY
DDEGGGEEDTQAFDIGALRNPKVIEENKIRRDIKPDSLCLSRQRPQVEDNTDIRDFIHRR
LQENDADPAAPPYDSLATYAYEGNGSVAESLSSIDSLTTEADQDYDYLSDWGPRFKVLAD
MFGEEESYNPDNVT
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgcttacaaggaactctttatacctgcttctctggatcctgtttgatggaggtctccta
acaccacttcagccacagccccaacagactttagccacagagccaaaagaaaatgttatc
cgccttttggggagacgatcccatttccaacgagttaaacgtggctgggtatggaatcag
ttttttgtgctggaagagtacatgggctccgaacctcaatatgtggggaagctacattct
gacttggacaaaggagagggcactgttaaatacacactctctggagatggtgctggcact
gtttttacaattgatgaaactacaggagacattcatgcaataagaagcctggatagagaa
gaaaaacctttctacactcttcgtgctcaggcagtggacatagaaaccaggaagccactg
gagcctgaatcagagttcatcattaaagtgcaggatattaatgacaatgagccaaagttt
ttggatggaccttatgttgctagtgttcctgaaatgtctcctgtgggtgcgtatgtgctc
caggtgaaggccacagatgcagatgatcctacctatgggaacagtgccagagttgtttac
agcatccttcaggggcaaccttatttctctattgatcccaagacaggtgtcatcaaaaca
gctttgccaaacatggacagagaagtcaaggagcagtaccaggtcctcatccaagcgaag
gacatgggaggacagcttggaggactagctggaacgaccattgtcaacatcaccctcacc
gatgtcaatgacaacccacctcgattcccaaaaagcatcttccatctgaaagttcccgag
tcttcccctgttggctcagctattggaagaataagagcagtagatcccgattttggaaaa
aatgcagaaattgaatacaacattgttccaggagatgggggaaatttgtttgacattgtc
acagatgaggatacacaagaaggaatcatcaaattgaaaaagcctttagattttgaaacc
aagaaggcatatacttttaaagtagaggcctccaaccttcaccttgaccaccgctttcac
tctgctgggccatttaaggatactgctacagtaaaaattagtgtactggatgtggacgag
ccaccagtgttcagcaaaccactgtacaccatggaggtttatgaagacactcctgtgggg
accatcatcggagccgtcacagcacaagaccttgatgtgggcagtagtgctgttaggtac
ttcatagattggaagagtgatggggagagctactttacaatagatggaacggaaggaacc
atcgccactaatgaattactagacagagagaacacggcacagtataatttctccataatt
gcaagtaaagttagtaacccattattaactagcaaagttaatatactaattaatgtccta
gatgtcaatgaatttcctccggaaatatctgtgccatatgagacagctgtatgtgagaat
gccaaaccaggacagataattcaaatagttggtgctgtagaccgagatctctcacctgct
gggcagaaattctcctttagattagcaccagaggctgtcatcaaaccaaattttacagtt
catgacttcagaaacaacacagctggaatcgaaacccgaagaaatggctacagccgcagg
cagcaagagttgtatttccttcccattgtaatagaagacagtagttatcctgtccagagc
agcacgaatacaatgactattcgtgtttgtagatgtgattcggatgggaccatcctgtct
tgcaacgtggaagccatttttctacctgtaggactcagcactggagctttgattgcaatc
ctactatgcattgttatactcttagctattgttgtgctgtatgtagcactgaggaggcag
aggaagaaagacacccttatgacttctaaagaagacatcagagacaatgtcatccattat
gatgatgaaggaggcggggaggaggacacccaggcctttgacatcggggctctgagaaat
cccaaggtgatcgaagagaacaaaattcgaagggatataaaaccagactccctctgttta
tctcgtcagagaccacaagtggaagacaacacagacataagggattttattcaccgaagg
ctacaggaaaatgatgcagatccagctgccccgccatacgattccttggccacttatgcg
tatgagggtaatgggtcagtggcagagtcactcagctccatagactctctcaccacggaa
gcggatcaggactatgactatctctcagactggggaccacgctttaaggtcttggcagac
atgtttggagaagaagagagttacaaccccgacaatgttacctag
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