Mus pahari (shrew mouse): 110328939
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Entry
110328939 CDS
T05929
Symbol
Trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
110328939 (Trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpah03036
]
110328939 (Trip13)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
110328939 (Trip13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
nSTAND3
AAA_16
AAA_18
AAA_14
Viral_helicase1
AAA_33
AAA_5
AAA_28
AAA_25
NPHP3_N
RuvB_N
RNA_helicase
DUF815
Cytidylate_kin
AAA_24
TsaE
ATPase_2
TIP49
ABC_tran
IstB_IS21
AAA_11
NACHT
AAA_7
AAA_30
AAA_17
ATPase
bpMoxR
PduV-EutP
Mg_chelatase
Rad17
AAA_19
PhoH
SLFN-g3_helicase
nSTAND1
NB-ARC
AAA_3
Motif
Other DBs
NCBI-GeneID:
110328939
NCBI-ProteinID:
XP_021064079
Ensembl:
MGP_PahariEiJ_G0015791
LinkDB
All DBs
Position
11:complement(5849582..5869898)
Genome browser
AA seq
432 aa
AA seq
DB search
MDEAVGDLKQALPCVAESPAVHVEVLQRSGSTAKKEDIKTSVYKLLNRHNIVFGDYVWTE
FDDPFLTRNVQSVSIVDTELKAKDPQPIDLSACTIALHIFQLNEEGPSSENLGEETENII
AASHWVLPAAEFHGLWDSLVYDVEVKSHLLDYVMTTLLFSDKNVDSNLITWNRVVLLHGP
PGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQKIQDLI
DDKEALVFVLIDEVESLTAARNACRAGAEPSDAIRVVNAVLTQIDMIKRHSNVVILTTSN
ITEKIDVAFVDRADIKQYIGPPSAAAIFKIYLSCLEELMKCQIIYPRQQLLTLRELEMIG
FIENNVSKLSLLLSEISRKSEGLSGRVLRKLPFLAHALYIQAPSVTIEGFLQALSLAVDK
QFEEKKKLSTYM
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggcggtgggcgacctgaagcaagcgcttccctgtgttgccgaatcgcccgcg
gttcacgtggaggttctgcagcggagcggaagcactgcaaaaaaagaagatataaagaca
agcgtttacaaactgctcaacaggcataatattgtgtttggagattacgtatggactgaa
tttgatgatccttttctaaccagaaatgttcagtcggtatctatcgttgacacagaatta
aaggctaaagaccctcagcccattgatctgagtgcatgcaccattgcacttcacatcttc
cagctgaatgaagaaggccccagcagtgaaaatttgggtgaagaaacagaaaatataatt
gcagcaagtcactgggttctgcctgcagctgaatttcatggactttgggatagcctcgtg
tatgatgtagaggtcaaatcacatctccttgattatgtgatgaccaccttactcttctca
gacaagaatgtggacagcaaccttatcacctggaaccgggtggtactgctgcacggtcct
ccgggtactggaaaaacatccctttgtaaggcattagcccagaaactgaccatcagactg
tcaagcaggtaccggtatggccaattgattgaaataaacagccacagcctattttctaag
tggttttcagaaagtggcaaattggtaactaagatgttccagaagattcaggacttgatt
gatgataaagaagctttggtgtttgttctgattgatgaggtggagagtcttacagctgct
cgaaatgcttgcagggcaggcgcagagccatcagatgctatccgtgtagtcaatgctgtg
ttgactcagattgatatgattaaaaggcattccaatgtggtgattctgaccacttccaac
attactgagaagattgatgtggcttttgtggatagagctgacatcaagcaatacattggt
cccccctctgcagcagccatcttcaaaatctacctgtcttgtttagaagaactgatgaag
tgccagatcatatatcctcgtcagcagctgttgacccttcgagagctagaaatgattggc
ttcattgaaaataatgtgtcaaagttgagcctccttttgagtgaaatttcaaggaagagt
gagggcctcagtggccgggtcttgaggaaactccctttcctggctcatgctctctacatc
caggcccccagcgttaccatcgagggtttcctccaggccctatctctggcagtggacaaa
cagtttgaggagaaaaagaaactttcaacttacatgtga
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