Mus pahari (shrew mouse): 110328974
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Entry
110328974 CDS
T05929
Symbol
Irx1
Name
(RefSeq) iroquois-class homeodomain protein IRX-1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110328974 (Irx1)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
110328974 (Irx1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Dicty_REP
MRP-S32
Motif
Other DBs
NCBI-GeneID:
110328974
NCBI-ProteinID:
XP_021064150
Ensembl:
MGP_PahariEiJ_G0015778
LinkDB
All DBs
Position
11:complement(3918368..3923869)
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AA seq
480 aa
AA seq
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MSFPQLGYPQYLSAAGPGAYGGERPGVLAAAAAAAAAASSGRPGTAELGAGAGAAAVTSV
LGMYAAAGPYAGAPNYSAFLPYAADLSLFSQMGSQYELKDNPGVHPATFAAHTTPAYYPY
GQFQYGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFAN
ARRRLKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESIDIDQIDERDGDQ
SNEDEEDKAEAPRARVAPPASARDQSSPLSAAETLKSQDSPLGLAKEVSEPGSTRLLSPG
AAAVGLQGAPHSKPKIWSLAETATSPDGAPKASPPPPSSHASAHGPPSGSPLQHPAFLPS
HGLYTCHIGKFSNWTNGAFLAQGSLLNMRSFLGVSAPHAAPHGPHLTAPPPPQPPVQVAT
GVLHGEKASTRSSPALPERDLVTRPDSPPQQLKSPFQPVRDNSLAPQEGTPRILAALPSA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccgcagttgggctacccgcaatacctaagcgccgcgggcccgggcgcctat
ggtggagagcgccctggggtgctggctgcggccgcggccgctgcggccgccgcctcgtcg
ggccgtcccgggactgcggagctgggagcgggcgcgggagcggccgcggtcacctcggtg
ctgggcatgtatgccgcggcgggaccgtacgcgggcgcacctaactacagcgccttcttg
ccctatgccgcggacctcagcctcttctcgcagatgggctctcagtatgaactcaaggac
aaccccggggtgcacccagctaccttcgcagcccacacaacgcctgcttattatccctat
ggccagttccaatacggggatcccggacggcccaagaacgccacgcgcgagagcaccagc
acgctgaaagcctggctcaacgaacatcgcaagaacccgtaccccaccaaaggagagaag
atcatgttggccattatcaccaagatgaccctcacgcaggtctccacctggttcgccaat
gcgcgccggcgcctcaagaaggagaacaaggtgacttggggggcgcgtagcaaggaccag
gaagacggcgccctctttggcagcgacaccgagggcgaccccgagaaggccgaggacgac
gaggagatcgacctggagagcattgacatcgatcagatcgacgagcgtgatggcgaccag
agcaacgaagacgaggaggacaaggcagaggctcctagggcgcgcgtagcccctcccgcc
tcagctcgggaccagagctccccgttgtcggccgctgagacactcaagtcccaagattcg
cccttgggcctggctaaggaggtctcagagcctggcagcacacgcctgctgagtcctggc
gccgcggcggtcggcctgcagggcgcgccgcacagcaagcccaagatctggtcgctggct
gagacagcaactagccccgacggtgcgcctaaggcgtctccaccgccaccctccagccac
gccagcgcacacgggccgcccagcggctcgcccctgcaacacccggccttcctacccagc
cacggactgtacacctgtcacataggcaagttttccaactggaccaacggcgcgttccta
gcacagggctcgctgctgaacatgcgatctttcctgggcgtcagcgcgcctcatgcagca
cctcacggcccacacctgaccgcaccaccacctccgcagcctccagtccaggttgccacc
ggggtgctccatggtgagaaggcctccacacgcagcagtcctgcacttccagagagagac
ctagtcaccagaccggattcgcccccacagcagttaaagtcgcccttccagcccgtgcgc
gacaactcgctggccccgcaggagggaacgcctcggatcctcgcagccctcccgtctgcc
tga
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