Mus pahari (shrew mouse): 110328977
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Entry
110328977 CDS
T05929
Symbol
Rnf180
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180 isoform X1
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mpah04121
]
110328977 (Rnf180)
Enzymes [BR:
mpah01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110328977 (Rnf180)
Ubiquitin system [BR:
mpah04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110328977 (Rnf180)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
110328977
NCBI-ProteinID:
XP_021064152
Ensembl:
MGP_PahariEiJ_G0015941
LinkDB
All DBs
Position
11:complement(35758210..35925960)
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AA seq
592 aa
AA seq
DB search
MKRSEESTSTQSPEEQIGTLHCWRCRKCIASSGCFMSPLETRVVEQDRHETVDAQNICHL
WHMNVDALPEWISCLLQKAQWTVGKLNCPFCGARLGGFNFVSTPKCSCGQLAAVHLCKSR
TDHQAAQAGRLMSPALKHLPHPGVPSGCENETLLTGGGSKPRNYRLLSMARNSNSLGRLT
EALCLEVRATYFEMKNEKLLFKASDPKCQPFVPQPDTGRCPSRASHRKSHSLDLNISEKL
ILLPTLYEIHSKPTAYPRLNETGPIDLSGLALPCTNSSCSFQSPPSFDPNMLLHRLSVAP
HETQAQRGREFQCGLEAPSVYSDHANANSLPFLMDLPSAGRSVLEASDQEEHLSPLDFLR
SASFPLGTINHRLNNRERSKLRTLRRQQRRERWLQKQGKYSGVGLLDHMTVSNEMSTDEE
TEFPEEKDSYMCAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPASTPCPLCRTIISRV
FLQTELNNATKTFFTKEYLKIKQSFQKSSSAKWPLPSCRKGFHLFGGFHRHAAPVTRRQF
PHGAHRMDYLHFEDDSRGWWLDMDMAIIYIYSVNWVIGFVVFCFLCYFFFPF
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaagcgaagagtcaacaagtacgcagagccccgaggagcaaataggcaccctt
cattgttggagatgtagaaaatgcattgcaagctctggttgcttcatgagtcctcttgag
actcgcgtggttgagcaggacagacatgaaacagttgatgctcaaaacatctgtcacctg
tggcacatgaatgtagatgcccttccggagtggatcagctgcctgctacagaaggcccag
tggacagttgggaaactgaattgtcctttctgtggggcccgattagggggctttaatttt
gtcagcactccaaaatgttcctgtggccagcttgcagctgtacatctctgcaagagccgg
accgatcaccaagcagcacaggcaggcagactaatgagtccagcgctgaaacatttgcca
catcctggagtcccgtcaggttgtgagaacgaaactctgctcacaggtggtggctccaaa
cccagaaactaccggcttctgagcatggcccgaaacagtaacagcctcggaagacttaca
gaagcactctgcctggaggtgcgagccacatattttgagatgaagaatgaaaaactgctc
ttcaaagcatcggacccaaaatgccagccttttgttcctcagcctgacaccggcaggtgt
ccttcaagagcttctcacagaaagtcacacagtttggacctgaacatcagtgagaagctg
attttattacccactttatatgaaatacatagtaagcctactgcctatcccaggcttaat
gaaacggggcccattgacctttcgggcttggctttaccgtgtactaacagtagctgctcc
tttcaaagcccacctagttttgatcctaatatgctgctgcacagactttcagtggctccc
catgagacccaggcacaaaggggaagagaattccagtgtggtctagaagctccttcggtc
tactcagatcacgctaatgctaacagcctgccattcctgatggatctgccctcagcaggg
aggagcgtgctggaggcctcggaccaagaagaacacctctccccgctggacttcctgcgc
tctgccagcttccccttgggcaccattaaccacaggctgaacaacagagagagaagcaag
ctgaggactctgcgaaggcagcagcggcgcgagcgatggctacagaagcagggtaaatac
tcaggagtgggattgctggatcatatgacagtgagtaatgagatgagtacagatgaggag
actgagttcccagaggagaaggacagctacatgtgtgccgtgtgcctggatgtatacttc
aacccctacatgtgctacccctgccaccacatcttctgcgagccctgcctacgaactctg
gccaaagacaaccccgcaagcactccctgcccactgtgccggacaattatttctagagtc
tttctccagacagaactgaacaatgccacaaagacattctttactaaagaatatttgaaa
atcaagcaaagctttcagaaatccagctctgcgaagtggcccttgccgagctgcaggaaa
ggattccatctcttcggagggttccacaggcatgctgccccagtgacacggaggcagttc
ccacacggcgcccacaggatggattacctgcacttcgaggacgacagccgtgggtggtgg
cttgacatggatatggcgatcatctatatttattcagtgaactgggtcatcggattcgtt
gttttctgctttctttgctattttttctttccgttttag
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