Mus pahari (shrew mouse): 110329012
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Entry
110329012 CDS
T05929
Symbol
Ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8
KO
K10570
DNA excision repair protein ERCC-8
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03420
Nucleotide excision repair
mpah04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110329012 (Ercc8)
09124 Replication and repair
03420 Nucleotide excision repair
110329012 (Ercc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mpah04121
]
110329012 (Ercc8)
03400 DNA repair and recombination proteins [BR:
mpah03400
]
110329012 (Ercc8)
Ubiquitin system [BR:
mpah04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110329012 (Ercc8)
DNA repair and recombination proteins [BR:
mpah03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
110329012 (Ercc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD_LRWD1
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_1st
Beta-prop_Nup120_160
Beta-prop_WDR11_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
110329012
NCBI-ProteinID:
XP_021064202
Ensembl:
MGP_PahariEiJ_G0015949
LinkDB
All DBs
Position
11:38587520..38626633
Genome browser
AA seq
396 aa
AA seq
DB search
MLSFLSARQSGLEDPLRLRRAQSTRRVLGLELNKDRDVERIHGSGVNTLDIEPVEGRYML
SGGSDGVIVLYDLENASRQPYYTCKAVCSVGRSHPDVHKYSVETVQWYPHDTGMFTSSSF
DKTLKVWDTNTLQAADVFNFEETVYSHHMSPAATKHCLVAVGTRGPKVQLCDLKSGSCSH
ILQGHRQEILAVSWSPRHEYILATASADSRVKLWDVRRASGCLLTLDQHNGKKSQAAESA
NTAHNGKVNGLCFTSDGLHLLTIGTDNRMRLWNSSSGDNTLVNYGKVCNDSRKGLQFAVS
CGCSSEFVFVPHGSTIAMYAVHSGERLAMLKGHYKSVDCCVFQPNFQELYSGSRDCNILA
WVPASYEPVPDDDEVSPKSQLNPAFTDAWSSSDEDG
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgttgagctttttgtccgctcgacagtcgggtttggaggacccgctccgcttgcgcaga
gcgcagtccacacggagggtcctgggactggagttaaacaaggacagggatgtggagaga
atccacggcagtggagttaacacccttgacattgagcccgttgaagggagatacatgttg
tcaggtggttccgatggtgtgattgtactctatgaccttgagaacgccagcagacagccc
tattacacatgtaaagcagtgtgttccgttggcagaagccatcctgatgttcacaagtac
agcgtggagactgttcagtggtatcctcatgacactggcatgttcacatccagctcattt
gataaaactctgaaagtgtgggatacaaacacattgcaggctgcagatgtgtttaatttt
gaggaaacagtttacagtcatcacatgtccccagcagccaccaagcactgtctggtagca
gttggaacaagaggacccaaggtacaactttgtgacttaaagtctggatcctgttctcac
attctacagggtcacagacaggaaatattggcggtttcctggtcaccacgtcatgaatat
atcttggcaacagcaagtgctgacagtagagtaaaattatgggatgtgagaagagcatca
ggctgcttgcttactcttgaccagcacaatgggaaaaagtcacaggccgctgaatcagca
aacactgctcacaatgggaaagttaacggcttatgttttacaagtgatgggcttcacctg
ctcaccattggcacagacaaccgaatgcggctctggaatagctccagcggggacaacaca
ctggtgaactatgggaaggtgtgtaatgacagcaggaaagggctgcagttcgctgtctcc
tgtggctgcagctcagagtttgtgtttgttccccacggcagcaccattgccatgtacgca
gtccactcgggagagcggctcgccatgctcaagggacattacaaaagtgtcgactgctgc
gtgtttcagcctaatttccaggaactttacagtggaagcagggactgcaatattcttgct
tgggtaccagcttcctatgagccagttcctgatgatgacgaagtaagtcccaaatcccag
ttaaacccagcgttcacggacgcctggagcagcagtgacgaggacgggtga
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integrated database retrieval system
