Mus pahari (shrew mouse): 110329062
Help
Entry
110329062 CDS
T05929
Symbol
Otp
Name
(RefSeq) homeobox protein orthopedia isoform X1
KO
K24901
homeobox protein orthopedia
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110329062 (Otp)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
110329062 (Otp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
110329062
NCBI-ProteinID:
XP_021064277
Ensembl:
MGP_PahariEiJ_G0015868
LinkDB
All DBs
Position
11:25954894..25964376
Genome browser
AA seq
325 aa
AA seq
DB search
MLSHADLLDARLGMKDAAELLGHREAVKCRLGVGGSDPGGHPGDLAPNSDPVEGATLLPG
EDITTVGSTPASLAVSAKDPDKQPGPQGGPNPTQAGQQQGQQKQKRHRTRFTPAQLNELE
RSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPGTLLPTPG
LPQFPSAAAAAAAAMGDSLCSFHANDTRWAAAAMPGVSQLPLPPALGRQQAMAQSLSQCS
LAAGPPPNSMGLSNSLAGSNGAGLQSHLYQPAFPGMVPASLPGPSNVSGSPQLCSSPDSS
DVWRGTSIASLRRKALEHTVSMSFT
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctcacgccgacctcctggacgccaggctaggtatgaaagatgccgccgagctt
ctgggccaccgggaggcggtgaagtgtaggctgggcgtggggggctctgaccctgggggc
catccaggggacctggcacccaactcggacccggtcgaaggagccactctgctaccgggc
gaggacatcaccaccgtgggctctactcctgcttcgctggcggtgagcgccaaagaccca
gacaagcagccggggccccagggcggccccaaccccacccaagccggccagcagcagggc
caacagaaacagaagcgccaccggacacgtttcaccccagcgcagctcaacgaattggag
aggagcttcgccaagactcactaccccgacatcttcatgcgtgaggagctagcgctgcgc
atcgggctgaccgagtcgcgggtgcaggtctggttccagaatcgccgcgccaagtggaag
aagcgcaagaagaccaccaacgtgttccgcgcgcccggcacgctgctgcccacgccgggg
ttgccccagttcccgtcggccgccgccgccgcggccgccgccatgggcgacagcctgtgc
tctttccacgccaacgacacgcgttgggcggcggccgccatgcctggcgtgtcccagctg
ccgctgccgcccgcgctcggccgccagcaggccatggcgcagtcgctgtcccagtgcagc
ctggcggcggggccgccgcccaactccatgggcttgtccaacagcttggcgggctccaac
ggcgcggggctgcagtcgcacctctaccagcccgccttccccggcatggtgcccgcctcc
ctccccggccccagcaacgtctccggctcgccccagctctgcagctctccggacagcagc
gacgtgtggcggggcacgagcatcgcctccctgcgccgcaaggcgctcgagcacacagtc
tccatgagcttcacctaa
DBGET
integrated database retrieval system
