Mus pahari (shrew mouse): 110329108
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Entry
110329108 CDS
T05929
Symbol
Ocln
Name
(RefSeq) occludin
KO
K06088
occludin
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03272
Virion - Hepatitis viruses
mpah04382
Cornified envelope formation
mpah04514
Cell adhesion molecules
mpah04530
Tight junction
mpah04670
Leukocyte transendothelial migration
mpah05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
110329108 (Ocln)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110329108 (Ocln)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110329108 (Ocln)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
110329108 (Ocln)
09158 Development and regeneration
04382 Cornified envelope formation
110329108 (Ocln)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
110329108 (Ocln)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mpah01009
]
110329108 (Ocln)
Protein phosphatases and associated proteins [BR:
mpah01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110329108 (Ocln)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
HBM
GAS
DUF4164
Laminin_II
Cation_ATPase_C
Swi5
FapA
TMF_TATA_bd
APG6_N
DUF4200
Knl1_RWD_C
Claudin_3
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
110329108
NCBI-ProteinID:
XP_021064337
Ensembl:
MGP_PahariEiJ_G0015914
LinkDB
All DBs
Position
11:complement(31378262..31434184)
Genome browser
AA seq
522 aa
AA seq
DB search
MSVRPFESPPPYRPDEFKPNHYAPSNDMYGGEMHVRPMLSQPAYSFYPEDEILHFYKWTS
PPGVIRILSMLIIVMCIAIFACVASTLAWDRGYGTGLFGGSLNYPYGSGFGYGGGYGGYG
YGYGYGYGGYTDPRAAKGFLLAMAAFCFIASLVIFVTSVIRSGMSRTRRYYLTVIIVSAI
LGIMVFIATIVYIMGVNPTAQASGSMYGSQIYTICNQFYTPGGTGLYVDQYLYHYCVVDP
QEAIAIVLGFMIIVAFALIIFFAVKTRRKMDRYDKSNILWDKEHIYDEQPPNVEEWVKNV
SAGTQDMPPPPSDYAERVDSPMAYSSNGKVNGKRSYPESFYKSTPLVPEVAQEIPLTSSV
DDFSQPRYSSHGNLETPSKRAPTKGKAGKGKRTDPDHYETDYTTGGESCEELEEDWVREY
PPITSDQQRQLYKRNFDAGLQEYKSLQAELDEVNKELSRLDKELDDYREESEEYMAAADE
YNRLKQVKGSADYKSKRNYCKELKSKLSHIKRMVGDYDRRKT
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgaggccttttgaaagtccacctccttacagacctgatgaattcaaacccaat
cattatgcgccaagcaatgatatgtatggcggagagatgcacgtcagaccgatgctctct
cagccggcgtactctttttatccggaagatgaaattcttcacttctacaaatggacgtcg
cccccgggggtgattcggatcctgtctatgctcattattgtgatgtgcatcgccatattt
gcctgtgtggcttccacacttgcttgggacagaggctacgggacaggcctctttggagga
agcctaaactacccttatggaagcggctttggctacggaggtggctatggaggctacggc
tatggctatggctatgggtatggcgggtatacagatccaagagcagccaaaggcttcctg
ttggccatggcagccttctgcttcatcgcttccttggtaatatttgtgaccagtgttata
agatctggaatgtccaggacgagaaggtattacttgactgtgatcatagtcagcgccatc
ctgggcatcatggtgtttattgccacgattgtgtacataatgggagtgaacccgacggcc
caggcttctggatctatgtacggctcacagatatataccatctgcaaccagttttatact
ccgggaggcactggtctctacgtggatcaatatttgtatcactactgtgtggtggatccc
caggaggctatagctattgtcctggggttcatgattatcgtggcttttgctttaatcatc
ttttttgctgtgaaaacccgaagaaagatggaccggtatgataagtccaatattttgtgg
gataaggaacacatttatgatgaacagccccccaatgttgaagagtgggttaaaaatgtg
tctgcaggcacacaggacatgcctccacccccatctgactatgcagaaagagttgacagt
ccgatggcctactcctccaatggcaaagtgaatggcaagcgatcatacccagagtctttc
tataagtcaacgcctctggtgcctgaagtggcccaggagattcctctgacctcgtctgtg
gacgacttcagccagcctcggtacagcagccatggtaacttagagacgccttctaaaagg
gctcccacgaaggggaaagcaggaaagggcaagaggacggaccccgaccactatgaaaca
gactacacgacgggcggggagtcctgcgaggagctggaggaggactgggtcagggaatat
ccacctatcacttcagatcaacaaagacaactctacaagagaaatttcgatgcaggtcta
caggagtataagagtttacaggcagaactggacgaggtcaataaagagctctctcgtcta
gataaagagctggatgactacagggaggagagcgaagagtacatggctgctgctgatgaa
tataatagactaaagcaagttaaaggatctgcagattataaaagtaagaggaattactgc
aaggagttgaagagcaaattatcgcacatcaagaggatggtgggagactatgacagacgg
aaaacttag
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integrated database retrieval system