Mus pahari (shrew mouse): 110329345
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Entry
110329345 CDS
T05929
Symbol
Itgb5
Name
(RefSeq) integrin beta-5 isoform X1
KO
K06588
integrin beta 5
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04145
Phagosome
mpah04148
Efferocytosis
mpah04151
PI3K-Akt signaling pathway
mpah04510
Focal adhesion
mpah04512
ECM-receptor interaction
mpah04810
Regulation of actin cytoskeleton
mpah04820
Cytoskeleton in muscle cells
mpah05165
Human papillomavirus infection
mpah05205
Proteoglycans in cancer
mpah05410
Hypertrophic cardiomyopathy
mpah05412
Arrhythmogenic right ventricular cardiomyopathy
mpah05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
110329345 (Itgb5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110329345 (Itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110329345 (Itgb5)
04148 Efferocytosis
110329345 (Itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
110329345 (Itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110329345 (Itgb5)
04810 Regulation of actin cytoskeleton
110329345 (Itgb5)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
110329345 (Itgb5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
110329345 (Itgb5)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
110329345 (Itgb5)
05412 Arrhythmogenic right ventricular cardiomyopathy
110329345 (Itgb5)
05414 Dilated cardiomyopathy
110329345 (Itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110329345 (Itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mpah04515
]
110329345 (Itgb5)
Membrane trafficking [BR:
mpah04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
110329345 (Itgb5)
Cell adhesion molecules [BR:
mpah04515
]
Integrins
Integrin beta subunits
110329345 (Itgb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
EGF_integrin
PSI_integrin
EGF_2
I-EGF_1
EGF_Teneurin
Integrin_b_cyt
vWA_SIBA-E
EGF_TEN
ESAG1
Motif
Other DBs
NCBI-GeneID:
110329345
NCBI-ProteinID:
XP_021064581
Ensembl:
MGP_PahariEiJ_G0016396
LinkDB
All DBs
Position
12:28861598..28979952
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AA seq
816 aa
AA seq
DB search
MPRVPATLYACLLGLCALVPRLAGLNICTSGSATSCEECLLIHPKCAWCSKEYFGNPRSI
TSRCDLKANLIRNGCEGEIESPASSTHVLRNLPLSSKGSSATGSDVIQMTPQEIAVSLRP
GDRTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFG
SFVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVS
RNRDAPEGGFDAILQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQC
HLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEIL
HGDSKNIIQLIINAYSSIRAKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGD
TASFEVSVEARSCPVRHSAQSFTLRPVGFRDSLQVEVAYNCTCGCSTGLEPNSARCSGNG
TYICGLCECDPGYLGTRCECQEGENQSGYQNLCREAEGKPLCSGRGECSCNQCSCFESEF
GRIYGPFCECDSFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRAKDGQ
ICSDRGRCVCGQCQCTEPGAFGETCEKCPTCPDACSSKRDCVECLLLHQGRPDNQTCHHQ
CKDEVITWVDTIVKDGQDAVLCFYKTAKDCVMMFSYTELPNGRSNLTVLREPECGSAPNA
MTILLAVVGSILLIGMALLAIWKLLVTIHDRREFAKFQSLKPPVQKAHLHTHCRFRLQQV
QQILQWLSGLRLLDGRRRGLRTKTGVSWTTWTICSR
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgggtgcccgcgaccctctacgcctgtctgctcgggctctgcgcgctcgtgccg
cgcctcgcagggctcaacatatgcaccagtggaagtgccacctcgtgtgaagaatgtctg
ttgattcacccaaaatgtgcctggtgctccaaagagtactttggcaacccacggtccatc
acctctcggtgtgacctgaaggcaaacctcatccgaaatggctgtgagggtgagattgag
agtccagccagcagcacccacgtccttcggaacctacctctcagcagcaagggttccagt
gccacgggctctgatgtcatccagatgacgccgcaggagattgcagtgagcctccggcca
ggtgaccggactaccttccagctgcaggtgcgccaggtggaggactatcccgtagacctg
tactacctgatggacctctctctctccatgaaggatgacttggacaacatccggagcctg
ggcaccaagcttgcggaggaaatgaggaagctcactagtaacttccggttaggtttcggg
tcttttgttgacaaggacatctctcctttctcctacacggcaccgagataccagaccaat
ccgtgtattggttacaagttattccccaactgcgtcccctccttcgggttccggcatctg
ctgcctctcacggacagagtggacagcttcaacgaggaagtgaggaagcagagggtgtcc
cggaaccgagatgcccccgaagggggctttgatgcgatcctccaggctgcggtctgcaag
gagaagattggatggcgaaaagatgctctgcacttgctggtgttcacaacggatgacgtg
ccccacatcgcactggatggaaagctgggtggcctggtccagccccacgatggccagtgt
cacctgaacgaagccaatgagtacacagcatccaaccagatggactatccatcgcttgcc
ctgcttggggagaagctggcggagaacaatatcaacctcatcttcgcagtgacgaagaac
cactatatgctctacaagaattttacagccctgatacctggaaccactgtggagattttg
catggagattccaaaaacattattcaactgattatcaatgcgtacagtagcatccgggct
aaagtggagctgtcggtgtgggatcagccagaagaccttaatctcttcttcactgccacc
tgccaagatggcgtatcttaccctggtcagagaaagtgtgagggtctgaagattggggac
acggcatcctttgaagtgtccgtggaggctcggagctgccctgtcagacattcagcacag
tctttcaccttgaggcccgtgggtttccgggacagtctgcaggtggaagttgcctacaac
tgcacctgcggctgtagcacggggctggagcccaacagtgccagatgcagtgggaatggc
acatacatctgtggactgtgcgagtgtgaccccggttacctgggcactaggtgcgagtgc
caggagggggagaaccagagcgggtaccagaacctgtgccgggaggcagaaggcaaacct
ctgtgcagcgggcgcggggagtgtagctgcaaccagtgctcctgcttcgagagcgagttc
gggaggatctacgggcccttctgcgagtgtgacagcttttcctgtgccaggaacaagggc
gtcctatgctcaggccacggcgagtgtcactgtggagaatgcaaatgccacgcaggttac
attggggacaattgtaactgctcaacagacatcagcacatgcagggccaaggatgggcag
atctgcagcgaccgaggccgttgtgtctgtgggcagtgccaatgcacagagcctggagcc
tttggggagacatgtgagaagtgtccaacctgtccggacgcttgcagctctaagagagac
tgcgtagagtgcttgctgcttcaccaggggagacctgacaaccagacctgccaccaccag
tgcaaagatgaggtgatcacgtgggtagacaccatcgtcaaagatggccaggacgctgta
ctttgcttctacaaaactgctaaggactgcgttatgatgttcagctacacagaactgccc
aatgggaggtccaacttgacggtcctcagggagccagagtgtggaagtgcccccaatgcc
atgaccatcctgctggctgtggttggcagcatcctcctgattgggatggcactcttggcc
atctggaagctgctcgtcaccatccacgaccgccgagagtttgccaagttccaaagcctc
aaaccccctgtacagaaagcccatctccacacacactgtagatttcgccttcaacaagtt
caacaaatcctacaatggctcagtggactgaggcttctggatggccggaggaggggacta
aggacaaagactggcgtgtcttggactacctggacaatttgctcacgctag
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