KEGG   Mus pahari (shrew mouse): 110329345
Entry
110329345         CDS       T05929                                 
Symbol
Itgb5
Name
(RefSeq) integrin beta-5 isoform X1
  KO
K06588  integrin beta 5
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04145  Phagosome
mpah04148  Efferocytosis
mpah04151  PI3K-Akt signaling pathway
mpah04510  Focal adhesion
mpah04512  ECM-receptor interaction
mpah04810  Regulation of actin cytoskeleton
mpah04820  Cytoskeleton in muscle cells
mpah05165  Human papillomavirus infection
mpah05205  Proteoglycans in cancer
mpah05410  Hypertrophic cardiomyopathy
mpah05412  Arrhythmogenic right ventricular cardiomyopathy
mpah05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    110329345 (Itgb5)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    110329345 (Itgb5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    110329345 (Itgb5)
   04148 Efferocytosis
    110329345 (Itgb5)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    110329345 (Itgb5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    110329345 (Itgb5)
   04810 Regulation of actin cytoskeleton
    110329345 (Itgb5)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    110329345 (Itgb5)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    110329345 (Itgb5)
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    110329345 (Itgb5)
   05412 Arrhythmogenic right ventricular cardiomyopathy
    110329345 (Itgb5)
   05414 Dilated cardiomyopathy
    110329345 (Itgb5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mpah04131]
    110329345 (Itgb5)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:mpah04515]
    110329345 (Itgb5)
Membrane trafficking [BR:mpah04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    110329345 (Itgb5)
Cell adhesion molecules [BR:mpah04515]
 Integrins
  Integrin beta subunits
   110329345 (Itgb5)
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail EGF_integrin PSI_integrin EGF_2 I-EGF_1 EGF_Teneurin Integrin_b_cyt vWA_SIBA-E EGF_TEN ESAG1
Other DBs
NCBI-GeneID: 110329345
NCBI-ProteinID: XP_021064581
Ensembl: MGP_PahariEiJ_G0016396
LinkDB
Position
12:28861598..28979952
AA seq 816 aa
MPRVPATLYACLLGLCALVPRLAGLNICTSGSATSCEECLLIHPKCAWCSKEYFGNPRSI
TSRCDLKANLIRNGCEGEIESPASSTHVLRNLPLSSKGSSATGSDVIQMTPQEIAVSLRP
GDRTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFG
SFVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVS
RNRDAPEGGFDAILQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQC
HLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEIL
HGDSKNIIQLIINAYSSIRAKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGD
TASFEVSVEARSCPVRHSAQSFTLRPVGFRDSLQVEVAYNCTCGCSTGLEPNSARCSGNG
TYICGLCECDPGYLGTRCECQEGENQSGYQNLCREAEGKPLCSGRGECSCNQCSCFESEF
GRIYGPFCECDSFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRAKDGQ
ICSDRGRCVCGQCQCTEPGAFGETCEKCPTCPDACSSKRDCVECLLLHQGRPDNQTCHHQ
CKDEVITWVDTIVKDGQDAVLCFYKTAKDCVMMFSYTELPNGRSNLTVLREPECGSAPNA
MTILLAVVGSILLIGMALLAIWKLLVTIHDRREFAKFQSLKPPVQKAHLHTHCRFRLQQV
QQILQWLSGLRLLDGRRRGLRTKTGVSWTTWTICSR
NT seq 2451 nt   +upstreamnt  +downstreamnt
atgccgcgggtgcccgcgaccctctacgcctgtctgctcgggctctgcgcgctcgtgccg
cgcctcgcagggctcaacatatgcaccagtggaagtgccacctcgtgtgaagaatgtctg
ttgattcacccaaaatgtgcctggtgctccaaagagtactttggcaacccacggtccatc
acctctcggtgtgacctgaaggcaaacctcatccgaaatggctgtgagggtgagattgag
agtccagccagcagcacccacgtccttcggaacctacctctcagcagcaagggttccagt
gccacgggctctgatgtcatccagatgacgccgcaggagattgcagtgagcctccggcca
ggtgaccggactaccttccagctgcaggtgcgccaggtggaggactatcccgtagacctg
tactacctgatggacctctctctctccatgaaggatgacttggacaacatccggagcctg
ggcaccaagcttgcggaggaaatgaggaagctcactagtaacttccggttaggtttcggg
tcttttgttgacaaggacatctctcctttctcctacacggcaccgagataccagaccaat
ccgtgtattggttacaagttattccccaactgcgtcccctccttcgggttccggcatctg
ctgcctctcacggacagagtggacagcttcaacgaggaagtgaggaagcagagggtgtcc
cggaaccgagatgcccccgaagggggctttgatgcgatcctccaggctgcggtctgcaag
gagaagattggatggcgaaaagatgctctgcacttgctggtgttcacaacggatgacgtg
ccccacatcgcactggatggaaagctgggtggcctggtccagccccacgatggccagtgt
cacctgaacgaagccaatgagtacacagcatccaaccagatggactatccatcgcttgcc
ctgcttggggagaagctggcggagaacaatatcaacctcatcttcgcagtgacgaagaac
cactatatgctctacaagaattttacagccctgatacctggaaccactgtggagattttg
catggagattccaaaaacattattcaactgattatcaatgcgtacagtagcatccgggct
aaagtggagctgtcggtgtgggatcagccagaagaccttaatctcttcttcactgccacc
tgccaagatggcgtatcttaccctggtcagagaaagtgtgagggtctgaagattggggac
acggcatcctttgaagtgtccgtggaggctcggagctgccctgtcagacattcagcacag
tctttcaccttgaggcccgtgggtttccgggacagtctgcaggtggaagttgcctacaac
tgcacctgcggctgtagcacggggctggagcccaacagtgccagatgcagtgggaatggc
acatacatctgtggactgtgcgagtgtgaccccggttacctgggcactaggtgcgagtgc
caggagggggagaaccagagcgggtaccagaacctgtgccgggaggcagaaggcaaacct
ctgtgcagcgggcgcggggagtgtagctgcaaccagtgctcctgcttcgagagcgagttc
gggaggatctacgggcccttctgcgagtgtgacagcttttcctgtgccaggaacaagggc
gtcctatgctcaggccacggcgagtgtcactgtggagaatgcaaatgccacgcaggttac
attggggacaattgtaactgctcaacagacatcagcacatgcagggccaaggatgggcag
atctgcagcgaccgaggccgttgtgtctgtgggcagtgccaatgcacagagcctggagcc
tttggggagacatgtgagaagtgtccaacctgtccggacgcttgcagctctaagagagac
tgcgtagagtgcttgctgcttcaccaggggagacctgacaaccagacctgccaccaccag
tgcaaagatgaggtgatcacgtgggtagacaccatcgtcaaagatggccaggacgctgta
ctttgcttctacaaaactgctaaggactgcgttatgatgttcagctacacagaactgccc
aatgggaggtccaacttgacggtcctcagggagccagagtgtggaagtgcccccaatgcc
atgaccatcctgctggctgtggttggcagcatcctcctgattgggatggcactcttggcc
atctggaagctgctcgtcaccatccacgaccgccgagagtttgccaagttccaaagcctc
aaaccccctgtacagaaagcccatctccacacacactgtagatttcgccttcaacaagtt
caacaaatcctacaatggctcagtggactgaggcttctggatggccggaggaggggacta
aggacaaagactggcgtgtcttggactacctggacaatttgctcacgctag

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