Mus pahari (shrew mouse): 110329475
Help
Entry
110329475 CDS
T05929
Symbol
Dscam
Name
(RefSeq) Down syndrome cell adhesion molecule
KO
K06767
Down syndrome cell adhesion molecule
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mpah04515
]
110329475 (Dscam)
Cell adhesion molecules [BR:
mpah04515
]
Immunoglobulin superfamily
DSCAM family
110329475 (Dscam)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
Ig_5
Pur_ac_phosph_N
C2-set_2
Sp38
C1-set
V-set_CD47
Interfer-bind
fn3_2
ChitinaseA_N
VEGFR1-3_N_Ig-like
Adeno_E3_CR1
DUF6377
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
110329475
NCBI-ProteinID:
XP_021064722
Ensembl:
MGP_PahariEiJ_G0016712
LinkDB
All DBs
Position
12:complement(87600298..88167208)
Genome browser
AA seq
2013 aa
AA seq
DB search
MWILALSLFQSFANVFSEEPHSSLYFVNASLQEVVFASTSGTLVPCPAAGIPPVTLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFSTLIHDNTYYCTAENPSGKIRSQDVHIKA
VLREPYTVRVEDQKTMRGNVAVFKCIIPSSVEAYVTVVSWEKDTVSLVSGSRFLITSTGA
LYIKDVQNEDGLYNYRCITRHRYTGETRQSNSARLFVSDPANSAPSILDGFDHRKAMAGQ
RVELPCKALGHPEPDYRWLKDNMPLELSGRFQKTVTGLLIENSRPSDSGSYVCEVSNRYG
TAKVIGRLYVKQPLKATISPRKVKSSVGSQVSLSCSVTGNEDQELSWYRNGEILNPGKNV
RITGLNHANLIMDHMVKSDGGAYQCFVRKDKLSAQDYVQVVLEDGTPKIISAFSEKVVSP
AEPVSLVCNVKGTPLPTVTWTLDDDPILKGSGHRISQMITSEGNVVSYLNISSSQVRDGG
VYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYKN
ANLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQ
PFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNIDFTSSLRISNLS
LMHNGNYTCIARNEAAAVEHQSQLIVRVPPKFVVQPRDQDGIYGKAVILNCSAEGYPVPT
IVWKFSKGAGVPQFQPIALNGRIQVLSNGSLLIKHVVEEDSGYYLCKVSNDVGADVSKSM
YLTVKIPAMITSYPNTTLATQGQRKEMSCTAHGEKPIIVRWEKEDRIINPEMARYLVSTK
EVGEEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEIKDVKART
ITLRWTMGFDGNSPITGYDIECKNKSDSWDSAQRTKDVSPQLNSATIIDIHPSSTYSIRM
YAKNRIGKSEPSNEITITADEAAPDGPPQEVHLEPTSSQSIRVTWKAPKKHLQNGIIRGY
QIGYREYSTGGNFQFNIISIDTTGDSEVYTLDNLNKFTQYGLVVQACNRAGTGPSSQEII
TTTLEDVPSYPPENVQAIATSPESISISWSTLSKEALNGILQGFRVIYWANLIDGELGEI
KNVTTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAA
SASMVFVSWLPPLKLNGIIRKYTVFCSHPYPTVISEFEASPDSFSYRIPNLSRNRQYSVW
VVAVTSAGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIVLPCKAVGDPSPAVKWM
KDSNGTPSLVTIDGRRSIFSNGSFIIRTVKAEDSGYYSCVANNNWGSDEIILNLQVQVPP
DQPRLTVSKTTSSSITLSWLPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLEN
LKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWN
DGGCPITSFTLEYRPFGTTVWTTAQRTSLSKSYILYDLQEATWYELQMRVCNSAGCAEKQ
ANFATLNYDGSTIPPLIKSVVQSEEGLTTNEGLKILVTISCILVGVLLLFVLLLVVRRRR
REQRLKRLRDAKSLAEMLMSKNTRTSDTLSKQQQTLRMHIDIPRAQLLIEERDTMETIDD
RSTVLLTDADFGEAAKQKSLTVTHTVHYQSVSQATGPLVDVSDARPGTNPTTRRNAKAGP
TARNRYASQWTLNRPHPTISAHTLTTDWRLPTPRATGSVDKESDSYSVSPSQDTDRARSS
MVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQLTAGTNEYTDSLTS
STPSESGICRFTASPPKPQDGGRVVNMAVPKAHRPGDLIHLPPYLRMDFLLNRGAPGTSR
DLSLGQACLEPQKSRTLKRPTVLEPTPMEASSSTSSTREGQQSWQQGAVATLPQREGAEL
GQAAKMSSSQESLLDSRGHLKGNNPYAKSYTLV
NT seq
6042 nt
NT seq
+upstream
nt +downstream
nt
atgtggatactggctctctccttgttccagagcttcgcgaatgttttcagtgaagagccc
cactccagcctctactttgtcaatgcatcgttgcaagaggtagtgtttgcaagcacgtcg
gggacgctggtgccctgcccggctgcaggcatccctcctgtgactctcagatggtaccta
gcgacgggcgaggagatctacgatgtccccgggatccgccacgtccatcccaatggcact
ctccaaattttcccctttcctccttcaagcttcagcaccttaatccatgataatacttac
tattgcacagctgaaaacccttcagggaaaattagaagtcaggatgtccacatcaaggct
gttttacgggagccctatacagtccgtgtggaggaccagaaaaccatgagaggcaatgtc
gcggtgttcaagtgcattatcccctcctcggtggaggcgtacgtcactgtcgtctcatgg
gagaaagacacggtttcacttgtctcaggatctagatttctcatcacatccacgggagcc
ttgtatattaaagatgtacagaacgaagatgggctgtacaactaccgctgcatcacgcgg
cacagatacacaggggagacaagacaaagcaacagtgcgagactgttcgtgtcagaccca
gcaaactcagccccatccatcctggacgggtttgaccaccgcaaagccatggcagggcag
cgagtggagctgccttgcaaagcacttgggcaccccgagccagactaccgctggctgaag
gacaacatgcccctggaactttctggaaggttccaaaagacagtgactgggctgctcatt
gagaacagccgcccctcagactcaggcagctatgtgtgtgaagtatccaaccgatatggc
actgccaaggtgataggccgcctgtacgtgaaacagccactgaaagccaccatcagtccc
agaaaggttaaaagcagcgtgggcagccaggtctccttatcctgcagtgtgacaggaaat
gaagaccaggaactctcctggtaccgtaatggcgaaatcctcaaccctggaaaaaacgtg
aggatcacaggactcaaccacgcaaaccttatcatggatcacatggtcaagagtgatggg
ggtgcctaccagtgctttgtacggaaggacaagctatctgctcaagactatgtccaggtg
gtccttgaagacggaactcccaaaatcatttctgcctttagcgagaaagtggtgagcccg
gcagagccagtgtccctcgtgtgcaatgtgaagggtacacccttgcccacggtcacctgg
accctagacgatgaccccatcctcaagggcagcggccaccgtatcagccaaatgatcacg
tctgaggggaacgtggtcagctacctgaatatctccagctcccaggtccgggatgggggt
gtctaccgctgcactgccaacaactcggctggagtcgtcctgtaccaggctcgaataaac
gtaagagggcctgcaagcatcagaccaatgaaaaacatcactgcgatagcggggcgtgac
acgtacatccactgccgcgtgattggctatccatattactccatcaagtggtacaagaac
gctaacctgcttcctttcaaccaccgccaggtggcgtttgagaacaatgggactctgaaa
ctctcagatgtgcagaaagaagttgacgagggagagtacacatgtaatgtgctggtacag
ccacagctctccaccagccagagtgtccacgtgacagtgaaagttccacctttcatccaa
ccttttgagttcccaagattctccattgggcagcgggtcttcatcccatgtgtggtggtc
tcaggggacctacccatcaccatcacctggcagaaagatggtcggccaattccagcaagc
ctcggggtaaccattgacaacattgacttcaccagctccctgaggatctccaacctctcc
ctgatgcacaatgggaattacacctgcattgcacggaatgaagcagcagccgtggaacac
cagagtcagctgattgtgagagttccccctaagttcgtggtacagccccgggaccaggac
gggatctatggcaaagcagtgattctcaattgctctgcagagggttatcctgtgcctaca
attgtgtggaaattctcgaaaggtgctggggtcccccagttccagccaatcgccttgaat
ggccgaatccaggtcctgagtaatggctcactcttgatcaagcatgttgtagaagaagac
agtggctactacctctgcaaggtcagcaacgatgtgggcgcagacgtcagcaagtccatg
tacctcacggtgaaaattcctgccatgataacctcttaccccaacaccaccctggccact
cagggtcaaaggaaggagatgagctgcacagcacatggagagaagcccatcattgtccgc
tgggagaaagaggacaggatcattaaccctgaaatggcccgttacctggtgtccaccaag
gaggtgggagaggaagtgatttctacgctgcagattttgccaacagtgagagaagattct
ggcttcttctcctgccatgctatcaattcatatggggaggaccgtggaataattcaactc
acagtgcaagaacccccagatcctcccgagattgagatcaaagacgtcaaagctcgcaca
atcacactcaggtggaccatggggttcgatggcaacagccctatcacaggctatgacatt
gaatgcaaaaataaatcagactcctgggattctgctcaaagaaccaaagatgtttcccct
cagctgaactcggccaccatcattgatatccacccttcctccacctacagcatccgcatg
tacgccaagaaccggattggcaagagtgagcccagcaacgagatcaccatcacggcggat
gaggcagctcctgatggtccacctcaggaagttcacttggaacccacttcatctcagagt
atcagggttacctggaaggctcccaagaaacacttacaaaatgggatcatacgtggctac
caaataggctaccgggagtacagcacagggggtaacttccagttcaacatcatcagtatc
gacaccaccggagacagtgaagtgtacaccctggacaacctgaataagttcacccagtat
ggcctggtagtacaggcttgtaacagggccggtacagggccttcttctcaggagataatt
actaccaccctggaggacgtacccagctaccctcccgaaaatgtccaagccatagcaacc
tcaccagaaagcatatcaatctcctggtccacgctctccaaggaggccttgaatgggatt
ctccaggggttcagggtcatctactgggccaacctcatagacggagagctgggcgagatt
aagaacgtcaccaccacacagccttccttggagttggatggactagagaaatacaccaac
tacagtatccaggtgctggccttcacccgtgcaggggatggcgtccggagtgagcagatc
tttacccgtaccaaggaggatgttccaggtcctcctgccggtgtcaaggcagcagcagcc
tcggcctccatggtcttcgtgtcctggctgcccccgctgaagctgaatggcatcattcgg
aagtacacagtgttctgctcccacccctaccccaccgtcatcagcgagttcgaagcctcc
cctgactcattttcctacagaatccctaacctgagtcggaatcggcagtatagcgtctgg
gtggtagcggtgacttccgccggaagaggcaacagcagcgagatcatcactgtggagccc
ctagctaaagctcctgcacggatcctcacgttcagcgggacagtgactactccatggatg
aaggacatcgtcttgccttgtaaagctgttggagacccgtcacctgccgtaaagtggatg
aaggatagtaacgggacacccagcctggtgacgattgacggtcgcaggagcatcttcagc
aacgggagtttcatcattcggacagtgaaggcagaggactccggctattacagctgtgtt
gccaataacaactggggatcagatgagatcatattaaatttgcaagtacaagttcctcca
gatcagcctcggctcaccgtatccaagacgacatcctcctccatcaccctctcctggctc
cctggagataatgggggtagctccatcagaggctacatcctgcaatattccgaggacaac
agtgagcagtggggcagctttcccatcagccccagcgagcgttcataccgtttggaaaac
ctaaagtgtgggacgtggtataagttcacccttactgcccaaaatggagtaggtcccggg
cgcataagtgaaatcatagaagccaaaactctggggaaagaaccccagttctccaaggag
caggagctcttcgccagcatcaataccacccgagtgagactgaatctgattggctggaac
gacggcggctgtccaatcacctcattcactcttgagtacagaccctttgggaccacggtc
tggaccacagctcagcggacctccctttccaagtcctacattctgtatgacctgcaagaa
gccacatggtatgaactgcagatgagagtgtgcaacagcgccggctgtgcggagaagcaa
gccaacttcgccacgctgaactacgatggcagtacaatccctccactcattaagtcagtt
gtccaaagtgaagaagggctgacaaccaacgaagggctcaagatccttgtgaccatctcc
tgcatcctggtcggggttctgctgctctttgtgcttctgctggttgtgcggaggagacgg
cgggagcagaggctgaagaggctgagagatgcaaagagtttagctgaaatgctcatgagc
aagaacacacggacttcagataccttaagcaagcagcagcagactctgagaatgcacatt
gatatacccagggctcagcttttgattgaagagagagacacaatggagaccatagatgac
cgctccacagtcctgttgacggatgccgacttcggggaagcagccaaacagaagtcactg
acggtgactcacacggtgcattaccaatcggtgtctcaggccaccgggcccctcgtggat
gtctctgatgctcggccaggaacaaatcccaccaccaggaggaatgcaaaggctggaccc
acagcaagaaaccggtatgccagccagtggaccctcaacagaccccaccctaccatctca
gcacacaccctcaccacagactggagactgcctacacccagggctacaggatccgtggac
aaggagagcgacagctacagcgtcagcccgtcacaagacacagaccgagcaaggagcagc
atggtctccacagaaagtgcctcctctacctacgaagaactggccagggcctatgaacac
gccaagatggaagagcagctgaggcatgccaagttcaccatcacagagtgcttcatatcc
gacacgtcctccgagcagttgacggcagggacaaatgagtacacggacagtctgacctcc
agtaccccttcagaatcggggatctgcagattcactgcatctccccccaaacctcaggat
ggaggacgagtggtgaacatggcggttccaaaggcccatcggccaggcgacctcatacac
ctgcctccatacctacgaatggacttcttgttaaaccggggcgcaccaggcaccagcagg
gacctgagtttaggacaagcgtgcttggaaccccagaaaagtcggaccctgaaacgcccc
acggtccttgagcccacccctatggaggcctcctcctccacctcttccacgcgagaagga
cagcagtcgtggcaacaaggggctgtggccaccttacctcagcgagagggtgcagagctg
ggacaggcagctaaaatgagcagctcccaagagtcactgctggactcccggggccatttg
aaaggaaacaatccctacgcaaaatcttacaccttggtataa
DBGET
integrated database retrieval system
