Mus pahari (shrew mouse): 110329501
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Entry
110329501 CDS
T05929
Symbol
Boc
Name
(RefSeq) LOW QUALITY PROTEIN: brother of CDO
KO
K20020
brother of CDO
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04340
Hedgehog signaling pathway
mpah04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
110329501 (Boc)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
110329501 (Boc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mpah04515
]
110329501 (Boc)
Cell adhesion molecules [BR:
mpah04515
]
Immunoglobulin superfamily
Other
110329501 (Boc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
ISET-FN3_linker
Ig_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
C2-set_2
Ig_4
Ig_5
C1-set
Izumo-Ig
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
110329501
NCBI-ProteinID:
XP_021064779
Ensembl:
MGP_PahariEiJ_G0016468
LinkDB
All DBs
Position
12:complement(39227058..39264494)
Genome browser
AA seq
1096 aa
AA seq
DB search
MTMCQGERPMLTLLWIFVATAGCLPDLNEVPQVTVQPTSTVQKLGGTVILGCVVEPPWVN
VTWRFNGKELNGSDDVLGVFITRGTLVIAALNNHTVGRYQCVARMPAGAVASVPATVTLA
NLQDFKLDVQHVIEVDEGNTAVIACHLPESHPKAQVRYSVKQEWLEASRDNYLIMPSGNL
QIVNASQEDEGMYKCAAYNPVTQEVKTSGSGDRLRVRRSTAEAARIIYPLEAQTVIVTKG
QSLILECVASGIPPPRVTWAKDGSSIAAYNKTRFLLSNLLIDTTSEEDSGTYRCMASNGV
GDPGAAVILYNVQVFEPPEVTVELSQLVIPWGQSAKLTCEVRGNPPPSVLWLRNAVPLTS
SQRLRLSRRALRVVSVRPEDEGVYQCMAENAVGSAHAVVQLRTARPDTTLRPGRDTKPIA
ATPPMLPSRPSRPDQMLREQPGLVKPPTSVQPTSLKCPGEEQVAPAEAPIILSSPRTSKT
DSYELVWRPRHEGSSRTPILYYVVKHRKVTNSSDDWTISGIPANQHRLTLTRLDPGSLYE
VEMAAYNCAGEGQTAMVTFRTGRRPKPEIVASKEQQIQRDDPGASLQSSSQPDHGRLSPP
EAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSV
EITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSGYSGRVYERPVAGPYITFTDAVNE
TTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRYWHSISHLQPETSY
DIKMQCFNEGGESEFSNVMICETKARKFSGQPGRPPPLTLAPPQPPLRKSILRLLDSHLP
VCRSDTMSVGLYPAVGGXVALCVLFFXEHTTDLGFPQSALLSSSCQYTMVPLGGLPGHQA
NGQPYLGGVSGRACVSRVHGSRGCPAATAGCPGRKPQHCPGELAQREDTNSLRSQPIVSN
GYDLQNQQVARGPQSASEGGAFLYTLPDDSTHQLLQPQDCCHLQKQPVTTCQTAVRPTSE
SPGLEVSWDPPYHSGSRGCLGLVPVEEVDSSDSCQVGGGDWCPQHPSGTYTGQELGMRFS
PRPPVHVSFETPPPTI
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgtgccaaggagagcggcctatgcttacactgctttggattttcgtggccaca
gcaggctgccttcctgatttgaatgaggttcctcaggtcaccgtccagcccacgtccact
gtccagaagctgggaggaactgtgatcctgggctgtgtggtggagccaccatgggtgaac
gtgacttggcgcttcaacgggaaggagctaaatggctctgatgatgttctgggtgtcttc
atcacccgtgggacccttgttattgctgccctcaacaaccacactgtgggacggtaccag
tgtgtggctcggatgcctgcgggagctgtggccagtgtgccagccacggtgacactagcc
aatctccaggactttaaattagatgtgcaacatgtgatcgaagtagacgaggggaacaca
gccgtcattgcctgccacctgcctgagagccacccaaaagcccaggtccggtacagtgtc
aaacaggagtggctggaggcctctagagacaactacctgatcatgccatcggggaatctc
caaattgtcaatgccagccaggaggacgaaggcatgtacaagtgtgccgcctacaacccg
gtgacccaggaagtgaaaacctccggctccggcgacaggctgcgcgtgcgccgctccacc
gctgaggctgcccgcatcatctacccactggaagcccagaccgtcattgtcaccaaaggc
cagagtctcatactagagtgtgtggccagtgggatcccgccacctcgagtcacgtgggcc
aaggatgggtccagcattgctgcctataacaagactcgcttcctgctgagtaacttgctt
attgacaccaccagcgaggaggactcaggcacctaccgatgtatggccagcaatggggtt
ggggatcccggggcagctgtcatcctctacaacgtccaggtgtttgaaccccctgaggtc
acagtggagctgtcccaactggtcatcccatggggccagagtgcaaagctcacctgtgag
gttcgaggaaaccccccaccttctgtcctatggctgaggaatgcggtgcccctcacctcc
agccagcgcctccggctgtcacgcagagccctgcgggtggtcagtgtcaggcctgaggac
gaaggcgtgtaccagtgcatggctgagaatgcggttggcagtgcccacgctgtggtccaa
ctgaggaccgctcggccagacacaaccctgagacccgggagggataccaagccgattgct
gccacaccccccatgctaccctccagacccagcagacctgaccagatgcttcgggaacag
ccgggacttgttaagcccccaacatcggtacaacctacttccctgaagtgcccgggagag
gaacaagtagcccctgcagaggcacctatcatcctcagctcaccccggacctccaagaca
gattcgtacgagctggtgtggcggcctcgccatgaggggagcagccggacacccatcctg
tactacgtagtgaagcatcgtaaggtcacgaactcctctgatgactggaccatttctggc
attccagccaaccagcaccgcctcaccctgaccaggcttgaccccggaagcttgtacgaa
gtggagatggcagcctacaactgtgctggcgagggccagacagctatggtcaccttccga
acaggacggcggcccaaaccggagatcgtggccagcaaggagcagcagatccagagagat
gaccctggtgccagtctccagagcagcagccagcctgaccacggccgcctctccccccca
gaagctccagacagacccaccatctccacagcttctgagacctccgtgtatgtgacctgg
attccccgagggaacggtggcttcccaattcagtctttccgtgtagagtacaagaagctg
aaaaaagtgggagactggatactggctaccagtgccatacctccctcgaggctctctgtg
gagatcacaggcctggagaaaggcatttcttacaagttccgagtccgtgctttgaacatg
ctaggggagagtgaacccagcgctccctcccggccctatgtggtgtcaggctacagtggc
cgtgtatatgagaggcccgtggcaggtccttacatcaccttcaccgacgcagtcaatgag
accactattatgctcaagtggatgtatatccccgccagcaacaacaacaccccaatccat
ggcttctatatctactaccgacccacagacagtgacaatgacagtgattacaagaaggac
atggtggaaggggacaggtactggcactctatcagccacctgcagccagagacttcctat
gacattaaaatgcagtgcttcaatgaaggaggggagagcgagttcagcaatgtcatgatc
tgcgagaccaaagctcggaaattctctggtcagcctgggagacccccacccttgactcta
gctccaccacagcctccacttagaaaaagtattctcaggctgttggacagtcacctccct
gtctgtcgctctgacactatgagtgtggggctttatccagctgtaggaggctaagtagcc
ctctgtgttctgttcttcncagagcatacaacagacctgggttttcctcagagtgccctc
ctgtcttcctcctgccagtacacaatggtgccattggggggacttccaggtcaccaagcc
aatgggcagccctacctcggtggcgtcagtggacgggcctgtgtcagccgagtgcacgga
agcaggggctgccccgctgctacagcgggctgcccaggcaggaagcctcagcactgccca
ggggagcttgcccagcgggaagacaccaacagcctacggagtcagcccattgttagcaat
ggatatgacctccagaaccagcaggttgccagaggtccccagtccgcctcagaaggaggt
gctttcttatacacgctgcctgatgattcaactcaccagctgctccaacctcaagactgc
tgtcacctccagaagcaacctgtcaccacgtgccaaacagcagtgaggccaacatctgaa
agtcctggactagaagtgtcatgggaccctccctatcattcagggtcccggggctgttta
ggtcttgtaccagttgaagaagtggacagttctgactcctgccaagtgggtggaggagac
tggtgtccccagcacccttcagggacctacacaggacaggagcttgggatgcggttctcg
ccccgcccaccagttcatgtgtcctttgaaacaccacctcccacaatttag
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