Mus pahari (shrew mouse): 110329554
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Entry
110329554 CDS
T05929
Symbol
Chrd
Name
(RefSeq) chordin isoform X1
KO
K04657
chordin
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
110329554 (Chrd)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CHRD
VWC
Motif
Other DBs
NCBI-GeneID:
110329554
NCBI-ProteinID:
XP_021064883
Ensembl:
MGP_PahariEiJ_G0016295
LinkDB
All DBs
Position
12:16264807..16274117
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AA seq
970 aa
AA seq
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MPSLPAPPAPRLLLGLLLLGSRPASGTGPEPPALPIRSEKEPLPVRGAAEPGAGITARAT
GQRPPAKPVPAGCSFGGKVYALDETWHPDLGEPFGVMRCVLCACEAPQWARRGRGPGRVS
CKNIKPQCPTLACRQPRQLPGHCCQTCPQERSNLDPQPAGLVFEYPRDPEHRSYSDRGEP
GVGERTRADGHTDFVALLTGPRSQAVARARVSLLRSSLRFSVSYQRLDRPSRVRFTDPTG
NILFEHPATPTQDGLVCGVWRAMPRLSVRLLRAEQLRVALVTSTYPSGEVWGPLIWQGAL
AAETFSAILTLEDPLQRGVGGIALLTLSDTEDSLHFLLLFRGLLGGLAQVPLKLQILHQG
QLLRELQANTSAQEPGFAEVLPSLTDQEMDWLELGELQMVLQRAGAPELRISGYITTRQS
CDVLQSVLCGADALIPVQTGAAGSASFILLGNGSLIYQVQVVGTGSEVVAMTLETKPQQK
NQRTVLCHMAELQPGGHMAVGVCSGLGARGAHMLLQNELFLNVGTKDFPDGELRGHVTAL
CYSGHSARYDRLPVPLAGALVLPPVRSQAAGHAWLSLDTHCHLHYEVLLAGLGGSEQGTV
TAHLLGPPGMPGPQRLLKGFYGSEAQGVVKDLEPVLLRHLAQGTASLLITTKSNPRGELR
GQVHIASQCETGGLRLASGGVQMPLAPNGEAATSPMLPAGPGPEAPVPVKHGSPGRPRDP
NTCFFEGQQRPHGARWAPNYDPLCSLCICQRRTVICDPVVCPPPSCPHPVQALDQCCPVC
PEKQRSRDLPSLPHLEPGEGCYFDGDRSWRAAGTRWHPVVPPFGLIKCAICTCKGATGEV
HCEKVQCPRLACAQPVRANPTDCCKQCPVGSGTNAKLGDPMQADGPRGCRFAGQWFPENQ
SWHPSVPPFGEMSCITCRCGAGVPHCERDDCSPPLSCGSGKESRCCSHCTAQRSSETRTL
PELEKEAEHS
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcctcccggccccgccggccccgcggctgctcctcgggctgctgctgctcggc
tcgcggccggccagtggcactggccctgagcccccagcactgcccatccgttccgagaag
gagccgctgcctgtccggggagcggcagagcccggagcaggcattacggcacgagcaacc
ggacagcggccgccagccaagcccgtccccgcaggctgctccttcggcgggaaggtctat
gccttggacgagacgtggcacccggacctgggggagccttttggggtgatgcgctgcgtg
ctgtgcgcctgtgaagcgcctcagtgggctcgccgtgggaggggtcctggcagggtcagc
tgcaagaacatcaaacctcagtgccccaccctggcctgcaggcagccgcgccagctgcca
ggacactgctgccagacctgcccgcaggagcgtagcaatctagatccacagcccgctggc
ctggtcttcgagtatccaagggacccagagcatcgcagttatagcgatcgaggagaaccc
ggcgttggggagcggacacgtgctgatggccacacagactttgtggcgctgctgacagga
ccgaggtcgcaggcggtagctcgtgctcgagtctctctgctgcgctcaagtttacgcttc
tctgtctcctaccagcggctggaccgtcccagcagggttcggttcacagatcccacaggc
aacattctgtttgaacaccctgcaacccccacccaggatggcctggtctgtggggtgtgg
cgggcaatgcctcggctgtctgtgaggctcctgagggcagagcagcttcgggtagccctt
gtgacatccacttacccttcaggagaagtctgggggcctctcatttggcaaggtgctctt
gctgcagagaccttcagtgccatcctgaccctggaagacccactgcagcggggtgtaggg
ggcatagccctgctcaccctcagtgacacagaagactctttgcattttttgctgctcttc
cggggtctgctgggaggactagctcaggtgcccttgaagcttcagatcctccaccaggga
cagctacttcgggagctccaggccaacacctcagctcaggagccaggttttgctgaggtg
ctgcccagccttacagaccaagagatggactggttggagctgggggagctgcagatggtt
ctacagagggcaggcgcgccagagctacgcatcagtggatacatcaccaccaggcagagc
tgtgatgtccttcaaagcgtcctttgtggggctgatgccctgatcccagtccagacgggt
gctgctggttcagccagcttcatactgctaggaaatggctcccttatctatcaggtgcaa
gtggtaggtacaggtagcgaggtggtggccatgacactggagaccaagcctcagcagaag
aaccagcgcactgtcctgtgccacatggctgaactccagccgggaggacacatggctgtg
ggtgtctgctctgggctgggtgcccgaggggctcatatgctgctacagaatgagctcttc
ctgaatgttggtaccaaggacttcccagatggagagcttcgggggcatgtgactgcccta
tgctacagtgggcatagtgcccgctatgacagattgcctgtgcctctggcaggggcacta
gtgctgccccctgtgcggagtcaggcagcagggcacgcctggctctccttggacacacat
tgccacttacactatgaggttctattggctgggcttggtggctcagagcaaggaaccgtc
actgcccacctccttgggcctcctgggatgccagggccccagcggctgttgaagggattc
tatggctcagaggctcagggcgtggtaaaagatctggagcctgtgctgctgcggcacctg
gcacagggcactgcctccctgctgatcaccaccaagagtaaccccagaggagaactacgt
gggcaggtgcacattgccagtcagtgtgagactggaggcctgcgcctggcctcaggagga
gtgcagatgcccttggctcctaatggagaggcagctacatcacccatgctgcctgctggc
cctggccctgaagccccagtcccagtcaaacatggcagccctgggaggccccgagatcct
aacacatgtttcttcgaggggcagcagcgtccccacggggctcgctgggcacccaactat
gacccactctgctccctctgcatctgccagagacgaacagtgatctgtgatcctgtagta
tgcccaccaccaagctgtccccacccggtgcaggcactggaccagtgctgtcccgtgtgt
ccagagaaacaacgcagtagagaccttcccagcctaccacatctggagccaggagagggg
tgctattttgatggtgaccggagctggagggcagcgggtacccgatggcaccctgttgtg
cccccctttggcctaattaagtgtgctatttgtacctgcaagggggccacgggagaggtg
cactgtgagaaggtgcagtgtcctcgcctggcctgtgctcagcctgtccgtgccaacccc
accgattgctgcaaacagtgtccagtagggtcagggactaatgccaagctgggagacccc
atgcaggctgatgggcctcgggggtgtcgctttgctgggcagtggttcccagagaatcag
agctggcacccatcagtgcccccctttggggagatgagctgtattacctgcagatgtggg
gcaggggtaccccactgtgagcgggatgattgttcacctccgctatcctgcggctcaggg
aaggaaagtcggtgctgttcccactgcacagcccaaaggtcctctgagactagaaccctt
ccagagctggagaaagaagctgagcactcctaa
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