KEGG   Mus pahari (shrew mouse): 110329625
Entry
110329625         CDS       T05929                                 
Symbol
Cldn1
Name
(RefSeq) claudin-1
  KO
K06087  claudin
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah03272  Virion - Hepatitis viruses
mpah04382  Cornified envelope formation
mpah04514  Cell adhesion molecules
mpah04530  Tight junction
mpah04670  Leukocyte transendothelial migration
mpah05160  Hepatitis C
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    110329625 (Cldn1)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    110329625 (Cldn1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    110329625 (Cldn1)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    110329625 (Cldn1)
  09158 Development and regeneration
   04382 Cornified envelope formation
    110329625 (Cldn1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05160 Hepatitis C
    110329625 (Cldn1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:mpah03037]
    110329625 (Cldn1)
   04147 Exosome [BR:mpah04147]
    110329625 (Cldn1)
   04515 Cell adhesion molecules [BR:mpah04515]
    110329625 (Cldn1)
Cilium and associated proteins [BR:mpah03037]
 Other cilia and associated proteins
  Stereociliary proteins
   110329625 (Cldn1)
Exosome [BR:mpah04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   110329625 (Cldn1)
  Exosomal proteins of colorectal cancer cells
   110329625 (Cldn1)
Cell adhesion molecules [BR:mpah04515]
 Immunoglobulin superfamily
  L1 family
   110329625 (Cldn1)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 Voltage_CLC SUR7 CD20 DUF3185 HAAS_TM DUF4134 Amastin DUF2207_C
Other DBs
NCBI-GeneID: 110329625
NCBI-ProteinID: XP_021065033
Ensembl: MGP_PahariEiJ_G0016332
LinkDB
Position
12:complement(21638701..21654426)
AA seq 211 aa
MANAGLQLLGFILASLGWIGSIVSTALPQWKIYSYAGDNIVTAQAIYEGLWMSCVSQSTG
QIQCKVFDSLLNLNSTLQATRALMVIGILLGLIAIFVSTIGMKCMRCLEDDEVQKMWMAV
IGGIIFLISGLATLVATAWYGNRIVQEFYDPLTPINARYEFGQALFTGWAAASLCLLGGA
LLSCSCPRKTTSYPTPRPYPKPTPSSGKDYV
NT seq 636 nt   +upstreamnt  +downstreamnt
atggccaacgcggggctgcagctactgggtttcatcctggcttccctgggatggatcggc
tccatcgtcagcactgccctgccccagtggaagatttactcctatgctggggacaacatc
gtgaccgctcaggccatctacgagggactgtggatgtcctgcgtttcgcaaagcaccggg
cagatacagtgcaaagtctttgactccttgctgaatctgaacagtactttgcaggcaacc
cgagccttgatggtaattggcatcctgctggggctgatcgcaatctttgtgtccaccatt
ggcatgaagtgcatgaggtgcctggaagatgatgaggtgcagaagatgtggatggctgtc
attgggggcataatatttttaatttcaggtctggcgacattagtggccacagcatggtat
ggaaacagaattgttcaagagttctacgaccccttgacccccatcaatgccaggtatgaa
tttggccaggccctctttactggctgggccgctgcctccctctgcctcctgggaggtgcc
ctactttcctgctcctgtccccggaaaacaacctcttacccaacaccacggccttatccc
aagccaacaccttctagtgggaaagattatgtgtga

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