Mus pahari (shrew mouse): 110329653
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Entry
110329653 CDS
T05929
Symbol
Ift57
Name
(RefSeq) intraflagellar transport protein 57 homolog
KO
K04638
intraflagellar transport protein 57
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah05016
Huntington disease
mpah05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
110329653 (Ift57)
05022 Pathways of neurodegeneration - multiple diseases
110329653 (Ift57)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mpah03037
]
110329653 (Ift57)
Cilium and associated proteins [BR:
mpah03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
110329653 (Ift57)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IFT57
Mod_r
MCPsignal
DUF745
Motif
Other DBs
NCBI-GeneID:
110329653
NCBI-ProteinID:
XP_021065074
Ensembl:
MGP_PahariEiJ_G0016497
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All DBs
Position
12:43878579..43939091
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AA seq
429 aa
AA seq
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MAAAAAVIPPSGLDDGVSRARGEGAGEAVVERGPGAAYHMFVVMEDLVEKLKLLRYEEEL
LRKSNLKPPSRHYFALPTNPGEQFYMFCTLAAWLINKTGRAFEQPQEYDDPNATISNILS
ELRSFGRTADFPPSKLKSGYGEQVCYVLDCLAEEALKYIGFTWKRPSYPVEELEEETVPE
DDAELTLSKVDEEFVEEETDNEENFIDLNVLKAQTYRLDTNESAKQEDILESTTDAAEWS
LEVERVLPQLKVTIRTDNKDWRIHVDQMHQHKSGIESALKETKGFLDKLHNEISRTLEKI
GSREKYINNQLEHLVQEYRGAQAQLSEARERYQQGNGGVTERTRLLSEVTEELEKVKQEM
EEKGSSMTDGTPLVKIKQSLTKLKQETVQMDIRIGVVEHTLLQSKLKEKCNMTRDMHAAV
TPESAIGFY
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcggccgcggtgatcccgccgtcgggcttggacgatggggtgtctcgggct
cgcggggaaggcgcaggggaggctgtggtggagcgcgggccgggagcggcctaccacatg
ttcgtggtgatggaagacttagtggagaagctgaagctgctccgctacgaggaggagcta
ctccgaaagagcaatctgaagcccccgtccagacactactttgctctgcctaccaacccc
ggtgagcagttctacatgttttgcactcttgctgcgtggctgatcaacaaaactggccgt
gcctttgagcagcctcaagaatacgacgatcccaatgcaactatatctaatatactctct
gagcttcgctcttttgggaggactgcagactttcccccttcaaaattaaagtctggttac
ggggaacaagtgtgctatgttcttgattgcttagctgaagaagcattaaaatatattggt
ttcacttggaaaaggccatcatacccagtggaagaactagaagaagaaactgttccagaa
gatgatgccgagctaacattaagtaaagtggatgaagaatttgtggaagaggagacagat
aatgaagaaaactttattgatctcaacgttttaaaggcccagacctatcgcttggacaca
aacgagtctgccaaacaagaagatattttggaatctacgacagatgccgcggaatggagc
ctagaagttgagcgtgtactaccacagctgaaagtcacgattaggactgacaataaggat
tggaggatccatgttgaccaaatgcatcagcacaaaagtgggattgaatctgctctgaag
gagaccaaggggtttttggacaagctccataatgaaattagcaggactctggaaaagatt
ggcagccgagaaaagtacattaacaatcaacttgagcacttggttcaagaatatcgcggg
gcccaagcccagctaagtgaggcaagggagcgctaccagcagggcaatggcggggtaact
gaacggaccagactcctctctgaggttacagaagaattagaaaaggtaaagcaagaaatg
gaagagaagggcagcagcatgacggatggcactcctttggtgaagattaagcagagctta
accaagctgaagcaagaaactgttcagatggacattagaatcggtgtggtggagcacacg
ctacttcagtcaaagctcaaggagaagtgtaacatgaccagagacatgcatgcggctgtc
accccagagtcggcaatcggcttctattaa
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