Mus pahari (shrew mouse): 110329734
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Entry
110329734 CDS
T05929
Symbol
Atxn2l
Name
(RefSeq) ataxin-2-like protein isoform X1
KO
K23625
ataxin 2/2L
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah05014
Amyotrophic lateral sclerosis
mpah05017
Spinocerebellar ataxia
mpah05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110329734 (Atxn2l)
05017 Spinocerebellar ataxia
110329734 (Atxn2l)
05022 Pathways of neurodegeneration - multiple diseases
110329734 (Atxn2l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110329734 (Atxn2l)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110329734 (Atxn2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
110329734
NCBI-ProteinID:
XP_021065230
Ensembl:
MGP_PahariEiJ_G0013660
LinkDB
All DBs
Position
1:complement(95966553..95978607)
Genome browser
AA seq
1096 aa
AA seq
DB search
MLKPQPPQQTSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLPATAAPSGPPAAVSPCLG
PAAAAGSGLRRGAESILAAPAPPPHQERPGAVAIGSVRGQTTGKGPPQSPVFEGVYNNSR
MLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRREDIVDT
MVFKPSDVLLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSDDYD
LESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLARE
IESSPQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLVSREGKYIPLPQRVREGPRG
GVRCSSSRGGRPGLSSLPPRGPHHLDNSSPGPGSEARGINGGPSRMSPKAQRPLRGAKTL
SSPSNRPSGEASVPPASAVGRMYPPRSPKSAAPAPVSASCPEPPIGSAVASSASIPVTSS
VVDPGAGSISPASPKLSLAPTDVKELPTKEPSRSLEAQELARIAGKVPGLQNEQKRFQLE
ELRKFGAQFKLQPSSSPETGLDPFPSRILKEEAKGKEKEVDGLLTSDPMGSPVSSKTESI
LDKEDKMPLAGVGGTEGPEQLPAPCPSQTGSPPVGLIKGDDKEEGPVTEQVKKSTLNPNA
KEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISYIPQIHMGPAV
QAPQMYPYPVSSSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAAGPPLVAAT
PYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVSSSTPQY
PAAEQPTPQALYATVHQSYPHHATQLHGHQPQPATTPTGSQPQSQHAAPSPVQHQAGQAP
HLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHPHQQLPHGFTNMA
HVTQAHVQTGVTAAPPPHPGAPHPPQVMLLHPPQGHGGPPQGAVPPSGVPALSASTPSPY
PYIGHPQGEQPGQAPGFPGGADDRILCRVGRSHSRRRQGLAPGSVLCFPPSSLSCDPAAP
LPTASPALSDPDCLLT
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcctcagccgccacaacagacctcccaaccccagcagccgccccccacgcaa
caggccgtggctcgccggcctcccggcgggaccagccctcccaacggcggcctcccggga
ccgctgcccgccaccgcggctccctcggggcctcccgcagcggtctctccgtgcctgggg
cccgcagccgctgccggcagcgggctccgccgcggagccgaaagcatcttagcggcgcca
gcgccgccgccgcatcaagaaaggccaggggcagtggcaatcggcagcgtcaggggacag
accaccggaaagggacccccacagtcacccgtgtttgaaggtgtctataacaattccagg
atgctgcatttcctgacagctgtagtgggttctacttgtgacgtaaaggtgaagaatgga
accacttacgagggcattttcaagactctgagctcaaagtttgaactggcagttgacgcg
gtgcatcggaaagcatccgagccagcaggtgggcctcgccgggaagacattgtggacacc
atggtgtttaaaccaagtgatgttctgcttgtccacttccgaaatgttgacttcaattac
gctactaaagataagttcactgactcagccattgccatgaactctaaggtgaacggagaa
cacaaagagaaggtgcttcaacgttgggagggcggtgacagcaacagtgatgactacgat
ctggaatctgatatgtctaatggatgggatcccaatgagatgttcaaatttaatgaggag
aactatggagtaaagaccacctatgacagcagtctatcttcttacacggttcccttagaa
aaggataactctgaagagtttcggcaacgggagcttcgagcagcccagttggctcgagag
atcgagtctagtccgcagtaccgtctacggattgctatggaaaatgatgatgggagaaca
gaggaggagaagcacagtgctgttcagcggcagggctctgggcgggagagccccagcttg
gtttccagggagggaaagtatatccctctgcctcaacgagttcgggaaggtccccgggga
ggagttcgatgcagcagttctcgaggagggcgccctggccttagctctttgccacctcgt
ggccctcaccatcttgacaacagcagtcctggccctgggtctgaggcacgcggtatcaat
ggaggtccttcccgcatgtcccccaaggcacagcggcctctgagaggtgccaagacctta
tcttcacccagcaataggccttctggagaagcttctgtccctccagcatctgcagtgggc
cggatgtaccctccacggtctcccaagtctgctgcccctgccccagtctcagcttcctgt
cctgagcctcccattggttcagcagtggcttcctctgcctccatccctgtgacatcatca
gttgtggatcctggtgcaggctctatttccccggcatctccaaaactctccctggcccct
acagatgtaaaagaactcccaaccaaggagcccagtaggagtttggaagcccaagagctg
gcccgcatagctgggaaagtccctggccttcagaatgaacaaaaacgatttcagttggaa
gaactgaggaaatttggggcccaatttaagcttcaacctagtagctcccctgagacgggc
ctggatccatttccttcccggatcttgaaagaagaggccaaaggaaaggagaaagaggtg
gatggtctattgacttcagatcctatgggatccccagtctcctctaagacagaatccata
ttggataaggaagataaaatgcccctggcaggagtaggagggactgaggggccagagcag
ctcccagcaccttgccccagccaaaccggcagtcctccagtgggcctcatcaagggggat
gacaaagaggaaggccctgttactgaacaagtaaagaagtctactttgaaccctaacgcc
aaggagttcaatccaacaaaacctctgctgtctgtgaacaaatctaccagtactccaact
tcaccagggccccgtactcattcaacaccttctataccggtgctgacagcaggccagagt
gggctctacagtccccagtacatctcatatatacctcagatccacatgggaccagctgta
caggcgcctcagatgtatccatatcctgtgtccagttccgtgcctgggcagcagggcaag
taccggggtgcaaaaggctcacttccccctcagcgctctgaccaacaccaaccagcctca
gcccctccaatgatgcaggctgctgctgctgctgctggcccacccctggtggctgccaca
ccctattcctcctacatcccctacaacccacagcagttcccaggccagcctgccatgatg
cagcccatggcacactacccttcacagccggtgttcgcccctatgcttcaaagtaatcca
cgaatgttgacatcaggaagccatccccaggccatcgtgtcatcctccactcctcagtac
cctgctgcagagcagcctaccccccaagccctctatgccactgttcaccaatcctatcca
caccatgccacgcagctccatggccaccagccgcagccggccaccacacctactgggagc
cagccacaatcccagcatgcggcccccagtcccgttcagcaccaggcggggcaggcccct
cacctgggcagtggacagccacagcagaatctgtaccatccaggggccctaacaggcacg
ccaccttctctaccaccgggaccttctgcccagtcccctcaaagcagcttcccccagcca
gctgctgtgtatgccatccatccccaccagcagctgccccacggcttcaccaacatggcc
catgttacccaggcccatgtccaaactggagtcacagcagccccgcccccacaccctggg
gctccccacccgccccaggtgatgctgctgcaccccccccagggccatggggggcccccc
caaggcgcggtgcccccgagtggggtgcctgcactctcagcttccacaccctcaccctac
ccctacatcggacacccccaaggtgagcagcctggccaggcgcctggatttccaggagga
gccgatgacaggattctatgtagggtgggcagaagccacagtcgccgccgccaggggctt
gctcctggctctgtcctttgcttccctccgtcctcgctcagttgtgatccagcagccccc
ctccccactgcctccccagctctcagtgaccccgactgtctcctgacttag
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