Mus pahari (shrew mouse): 110329738
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Entry
110329738 CDS
T05929
Symbol
Ccdc50
Name
(RefSeq) coiled-coil domain-containing protein 50 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110329738 (Ccdc50)
Membrane trafficking [BR:
mpah04131
]
Autophagy
Other autophagy associated proteins
Others
110329738 (Ccdc50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
DUF1462
Motif
Other DBs
NCBI-GeneID:
110329738
NCBI-ProteinID:
XP_021065234
Ensembl:
MGP_PahariEiJ_G0016339
LinkDB
All DBs
Position
12:22595383..22647168
Genome browser
AA seq
480 aa
AA seq
DB search
MADVSVDQSKLPGVKEVCRDFAVLEDHTLAHSLQEQEIEHHLASNIQRNRLVQHDLQVAK
QLQEEDLKAQAQLQKRYKALEQHDCEIAQEIQEKLTIEAERRRIQEKKDEDIARLLQEKE
LQEEKKRKKHTPEFSGGNAFGDNYYCEDGDQSRSRRDRELGSGHSKFCRLQNDGKTVRQK
EKPRHQQENLEDLEECHPSERSLPSASWSRGREDSQTACEQQERKRSLQERLRKSPLPKI
SGEVFLSTDSEDWEADCSPGTRSREKQSHHRGRLSPKSSQKTGLPYKEIVYGRDPGQGDH
RERRHRPRTSPFSEDKELRYHHVAGMKPRGIKEAVSTPARVSHRDQEWYDAEIARKLQEE
ELLATHVDLRAAQVAQDEEIARLLMAEEKKAYKKAREREKSSLDKRKHDSECKSKAKSAH
SKSKEGDETHRSKIDRPSRPPPPTMMGPEDMDPTHFPNQHSTTRHFPKSESSQKGFHNKQ
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtgagtgtggatcaatccaagttgccgggcgtgaaggaagtgtgtagagat
tttgccgtcctggaggaccacaccctggcccatagcctgcaggaacaagagattgagcat
catttggcatccaacattcaaaggaaccgtctggtacaacatgatctgcaggttgctaag
cagctccaagaggaagacctcaaagcccaagctcagctccagaagcgctacaaagccctt
gaacaacatgattgtgaaattgctcaggaaatccaggagaagctaaccattgaggctgag
agacgacgcattcaggagaagaaggatgaggacatagcacgtcttttgcaagagaaggaa
ctacaggaagagaaaaagaggaagaaacacactccagagttttccgggggaaatgctttt
ggagataactactattgtgaggatggagaccagtcaaggtcaaggagggacagggaactg
ggttctggacactcaaagttttgtagactccaaaacgatgggaagactgtaaggcagaag
gagaaaccaaggcatcagcaggagaacttggaagatctggaagaatgccatccatcagag
agatccctgccttctgctagctggagcagagggagggaggattcccagactgcctgtgag
cagcaggaaagaaagcgatctcttcaggagaggctccggaaatctccacttcccaagatc
agcggggaggtatttctgagcactgactctgaagactgggaagctgactgtagccctgga
actcggagtcgggaaaagcagtctcatcaccgtggcagactttcacccaagtcttcacag
aaaacaggacttccctataaggaaattgtatatgggagggaccctgggcaaggtgaccac
agagaaaggagacataggcccaggacttctcccttctcagaagataaagaacttcgctat
caccatgttgcaggaatgaaaccaagaggaataaaagaagctgtctctactccagcacga
gtgagccacagggaccaggagtggtatgatgctgaaattgcccggaaattgcaagaggaa
gaacttttggctactcatgtggacttgagagcagctcaggttgcccaggatgaggaaatt
gctcgacttctaatggctgaggaaaaaaaagcttacaagaaagccagagagcgagaaaag
tcatctttggacaaaaggaaacatgactctgagtgcaagtcaaaagcaaagtcagcccac
tcaaagtcaaaagagggtgatgaaactcaccgttccaagattgacagaccatcacgacca
ccaccacctaccatgatgggccctgaggatatggaccccacccattttccaaaccagcat
agtactacacgtcattttccaaagtcagagtcctcccagaaaggcttccataataagcag
taa
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