Mus pahari (shrew mouse): 110329939
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Entry
110329939 CDS
T05929
Symbol
Nlrc3
Name
(RefSeq) NLR family CARD domain-containing protein 3 isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mpah04054
]
110329939 (Nlrc3)
Pattern recognition receptors [BR:
mpah04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
110329939 (Nlrc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
NPHP3_N
AAA_16
AAA_14
AAA_25
AAA_19
bL9m_N
Motif
Other DBs
NCBI-GeneID:
110329939
NCBI-ProteinID:
XP_021065545
Ensembl:
MGP_PahariEiJ_G0016102
LinkDB
All DBs
Position
12:complement(240129..259827)
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AA seq
1062 aa
AA seq
DB search
MRKQEVWSDRQTCLAYRAGSPAEQVKALVELLAGKDSQLLQAWDKMPDSPLGSQSNEARI
PKHSEVPLSRVGNDPELGSPSHRLASLMLVEGLTDLQLKEHDFTQVEATRGVWRPARALT
LDRLFLPLSRVSIPPRVSLTVGVAGVGKTTLVRHFVRCWARGQVGKGFSRVLPLTFRDLN
TYEKLSADRLIHSIFSNTGEAGLAAMAPDRVLLVLDGLDECKTPLEFSNTMACSDPKKEI
QVDHLITNIIRGNLFPEISVWITSRPSAAGQIPGGLVDRMTEIRGLTEEEIKVCLEQMFP
EEQNLLGQVLSQVQANRALYLMCTVPAFCRLTGLALGHLYRTRLAVQDLELPLPQTLCEL
YSWYFRMALGGEGQDKGKVSPRIEQVTQGARKMVGTLGRLAFHGLVKKKYVFYEQDMKAF
GVDLALLQNTLCSCLLQREETLASSIAYCFIHLSLQEFVAATYYYSASKRAIFDLFTESG
MSWPRLGFLAHFRCAAQRATQAKDGRLDVFLRFLSGLLSPRVNTLLAGSLLSQGEHQSYR
DQVAEILQGFLHPDAAVCARAINVLYCLSELRHTELACSVEEAMRSGTLAGMTSPSHRTA
LAYLLQMSDICSPEADFSLCLSQRVLQSLLPQLLYCQSLRLDNNQFQDPVMELLGSVLSG
KDCRIQKISLAENQIGNKGAKALARSLLVNRSLVTLDLRSNSIGPPGAKALADALKINRT
LTSLSLQSNMIKDDGVMCMAEALVSNQTISMLQLQKNLIGLTGARQMADALKQNRSLKAL
MFSSNTIGDRGAIALAEALKVNQGLENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRE
NSISPEGAQALAQALCRNNTLKRLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQ
AGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLTALYLQVASIGSQGA
QALGEALAVNRTLEILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDGAIFVA
SALSENHGLHHINLQGNPIGESAARMISEAVKTNAPTCTVEM
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagcaagaggtgtggtcagacagacagacatgcctggcctacagagctggctcc
ccagctgagcaggtgaaagcccttgtggagctgctggctgggaaggacagtcagctgtta
caagcctgggacaaaatgccagactccccactaggatcccaaagcaacgaggcaaggata
ccgaagcactctgaggttccgctgagcagagtgggaaatgacccagaactgggcagcccc
tcacaccggctggccagcctcatgctggtcgagggcctgacagacctgcagctaaaggag
catgacttcacacaggtggaggccacgcgtggggtctggcgccctgccagagctctcacc
ctggacaggctcttcctgcctctgtcccgggtatccatcccgcctcgagtctctctcacc
gtcggagtggctggcgtgggcaagaccacgctggtgaggcattttgttcgttgctgggcc
agaggacaggtgggcaagggcttctcacgggttctgcccttgacctttcgggatctcaac
acctatgagaaactgtctgcagacagactcatccactccatcttctcaaacactggggaa
gctggtctggcggctatggccccagacagagtcctcctggtcctggatggcttggatgag
tgtaagacacccctggaattctccaataccatggcctgctcagacccaaagaaggagatc
caggtagaccacctgatcactaacatcatccgaggcaacctcttcccagaaatttctgtc
tggatcacctcccggcccagtgctgctggtcagatccctgggggcctagtggaccggatg
actgagattcggggcctaaccgaggaagagatcaaggtgtgtctggagcagatgttccct
gaggagcagaacctcttaggtcaggtccttagtcaagtgcaggccaacagggctctgtat
ctgatgtgtactgtaccagccttttgtaggctcacggggctggctctgggtcacttgtac
cgcaccaggctggccgtccaagacctagagctgccgttgcctcagaccctatgtgagctc
tactcttggtactttaggatggctcttggtggggaaggtcaggacaagggaaaggtaagt
cctaggattgagcaggtgacccagggagctcgcaaaatggtggggacattgggccgcctg
gccttccacgggctggtcaagaagaaatacgtgttttatgagcaagacatgaaggcattt
ggagtggacctcgctctgttgcagaacactctgtgcagctgtctcctgcagcgggaagag
accctggcctcctccatagcttactgcttcattcacctgtctctgcaagaatttgtggcg
gctacatattactatagtgcatccaagagggccatctttgacctcttcactgagagtggc
atgtcctggcccagactgggtttcctcgcccatttcaggtgtgcagcccagcgggccaca
caagcaaaggacgggaggctggacgtgttcctgcgcttcctctctggcctcttgtcccca
agggtcaatactctactggccgggtctctgttgtcccaaggcgagcatcagagctaccgg
gaccaggtggccgagatcctacaaggcttcctccatccggacgccgcagtctgtgcacgt
gccatcaatgtcttgtactgcctgagcgagctgcgtcacacggaactggcctgcagtgtg
gaggaggccatgcggagtgggaccttggctggaatgaccagcccctcacaccgcactgct
ctggcctacctcctgcagatgtctgatatctgctccccggaggctgacttctcgctgtgc
ctcagccagcgtgtcctccagagcctgttgccccagctgctctactgtcagagcctcagg
ctggacaacaaccagttccaggaccctgtgatggagttgctgggcagtgtgctgagtggg
aaggactgtcgcattcaaaagatcagcctggctgagaatcagatcggtaacaaaggagcc
aaagccctggccagatccctcctggttaacagaagcctcgtcacactcgacctccggagt
aacagcattggaccaccaggggctaaggctctggccgatgctctgaagataaaccgaacg
ctaacttctctaagcctccaaagcaacatgatcaaggatgatggcgtcatgtgcatggct
gaggccctggtctccaaccagaccatctccatgctacagctacagaagaacctaattggg
ctcacaggagcccggcagatggcagatgccttgaagcagaacaggagcctgaaagcactc
atgttttccagtaataccattggcgacagaggtgccatagccctggctgaggccctcaag
gtgaaccagggcctggagaacttagacctacagagcaattccatcagtgacatgggagtg
acggtgctgatgcgagccctctgcagtaaccagacactctccagtctcaacctacgagaa
aactccatcagcccagagggagcccaggccctcgctcaagctctctgcaggaacaacact
ctgaagcgcttggacctgacagctaatctcctccatgaccgaggtgcccaggccattgca
gtagctgtgggagaaaaccactctctcacacaccttcacctgcagtggaacttcatccag
gctggtgcagccagggccctgggacaagcactccagctgaacaggaccctgacaacctta
gacttacaggagaatgccataggggatgaaggagcttcctcagtggctggcgcactgaag
gtcaacacaaccctcactgctctctacctacaggtggcctccattggtagccagggggcc
caggcacttggggaggccctcgctgtgaacagaaccttggagattcttgacttacgagga
aacgacgttggggcagctggagccaaggccttggcaaatgctttgaagttaaactccagt
ctccgaagactcaatctccaggagaactcgctggggatggatggggccatatttgttgcc
tctgcgctgtctgagaaccacggcctgcaccatattaatctccaggggaatcccattggg
gaatctgctgccaggatgatctcagaggctgtcaagacaaatgctcccacttgcactgtg
gagatgtaa
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integrated database retrieval system
