Mus pahari (shrew mouse): 110330064
Help
Entry
110330064 CDS
T05929
Symbol
Atg2a
Name
(RefSeq) autophagy-related protein 2 homolog A isoform X1
KO
K17906
autophagy-related protein 2
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04136
Autophagy - other
mpah04140
Autophagy - animal
mpah05010
Alzheimer disease
mpah05014
Amyotrophic lateral sclerosis
mpah05016
Huntington disease
mpah05017
Spinocerebellar ataxia
mpah05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110330064 (Atg2a)
04136 Autophagy - other
110330064 (Atg2a)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
110330064 (Atg2a)
05014 Amyotrophic lateral sclerosis
110330064 (Atg2a)
05016 Huntington disease
110330064 (Atg2a)
05017 Spinocerebellar ataxia
110330064 (Atg2a)
05022 Pathways of neurodegeneration - multiple diseases
110330064 (Atg2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110330064 (Atg2a)
03029 Mitochondrial biogenesis [BR:
mpah03029
]
110330064 (Atg2a)
Membrane trafficking [BR:
mpah04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
110330064 (Atg2a)
Mitochondrial biogenesis [BR:
mpah03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
110330064 (Atg2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
110330064
NCBI-ProteinID:
XP_021065671
Ensembl:
MGP_PahariEiJ_G0014096
LinkDB
All DBs
Position
1:117646343..117666867
Genome browser
AA seq
1927 aa
AA seq
DB search
MSRWLWPWSNCVKERVCRYLLQHYLGHFFQEHLSLDQLSLDLYKGSVVLRDIHLETWSVN
EFLRSMESPLELVEGFVSSIEVAVPWAALLTDHCTVCVSGLQLTLQPRQGSGPGAADSQS
WASCMTTSLQLAQECLREGLPEPSEPPQPLEGLEMFAQTIETVLRRIKVTFLSTVVRVEH
SLGDEERSVAVEVQVQRLEYCDEAVRDPSQAPPVDVHQPPAFMHKLLQLSGVCLYFEELP
SQADPPQPPLQIGSCTGYVELMVRLKQNEAFPGPKLEVSGQLGSLHLLLTPHQLRQLQQL
LSAINLADPGGLANKLSKSRPLGAEDLWLIEQDLNQQLQAGAVAEPLSLYPITNPLNLDN
ADLFFSMAGLTSSVTSAVSELSVYSVDLGSSVHSNMAFHRPSTPPHSGGKMAPTPLLDTT
RPDSLVKMTLGGVSLTLLQTASPSSGPPDLPTHFFAEFDAAKDGPFGSRDFSHLRPRFQR
ACPCSHVRLTGTAVQLSWELRAGGNSRRASSTEVHFGQLEMLECLWPRAAAEPEYTEILS
FPSHSGSEASARPCAHLRHTQTLRRVLKNRSRRSTACHCHSELSLDLADFQSDVELGSLD
RLAALFRQVTTPSEPPAGLLTEPPQATEQQTVFRLSAPRATLRLRFPIPDLRPDRDPWAG
QAVRPEQLRLELSEPQFRSELNSGPGPPAPTRLELTCSDLQGIYEDGEKPPVPCLRVSKA
LDPRSTEAKYFLPQVVVTLNPQSSGTQWETTASEKGQDLELSTESPCELQQPSPSPFSSK
RTMYETEEMVIPGDPEEMRTFQSRTLALSRCALDVIMPSAHIFLPSKEIYESIYNRINND
LLMWEPADLLPTSNIAARPPGSLGFKMCKSAFKLGMRSTLPPIHSDSDSDDEDTQFFSMA
SGVPQTPAPEPSHRHSQSTFSTLVTVLKGRITAFCEAKDETGKRLDGTHGELVLDVEQGT
IFSVAQYCGQPGLGYFCLEAEKAKLYHRAAIEDYLLPTHLEVPSFAPPAQLAPTIYPSEE
GVTERGTLGRKGQGPPMLSAAVRIHLDPHKNVKEFLVTIRLHKATLRHYMAPPEQSWHSQ
LLDFLDVLDDPVLGYLPPTVITILHTHLFSCAVDYRPLYLPVRVLVTAETFTLSSNIVMD
TSTFLLRFILDDSALYLSDKCEVENLDLRRDYVCVLDIDLLELVIKTWKGSTEGRLSQPL
FELRCSNNVVHVHSCADSCALLVNLLQYLTSSGDLHPPPRPPSPTEIAGQKLSESPASLP
SCLPVETALINQGDLTDALLDTERRGLRELAQSSGGPLPQASPVSVYLFPGERSGAQAPL
SPPGASSHTLGSKAKEHENEEEGDGDTLDSDEFCILDAPGLGIAPRDGEPIVTQLHPGPI
IVHDGHFSQPLGSTDLLRAPAHFPVPSSRVVLREVSFIWHLYGGRDFGLHPTYRARVGLT
GPRVSPSRSSGPNRPQNSWRTQGGIGRQHQVLMEIQLSKVSFQHEVYPEESAIAGGLGQE
GDERPLSRQVLIVQELEIRDRLATSKINKFLHLHTSERLPRRTHSNMLTIKALHVAPTSS
VGGPECCLRVSMMPLRLNVDQDALFFLKDFFSSLAASINPMVPGDTCEGERPETYSQPGS
PQEGQSEDTETASSPPEAPGSGYSSSDQQPIYFREFRFTSEVPICLDYHGKHVTVDQVGT
FMGLLIGLAQLNCSELKLKRLCCRHGLLGVDKVLCYALNEWLQDIRKNQLPGLLGGVGPM
HSVVQLFQGFRDLLWLPIEQYRKDGRLIRGLQRGAASFGSSTASAALELSNRLVQAIQAT
AETVYDILSPASPVSRSLQDKRSSRKLRRGQQPADLREGMAKAYDAVREGILDTAQTICD
VASRGHEQKGLTGAVGGVIRQLPPTVVKPIIVATEATSNVLGGMRNQILPDAHKDHALKW
RLEEAQD
NT seq
5784 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgatggctgtggccatggtcgaactgtgtgaaagagcgtgtctgccgctacttg
ctacagcactacttgggtcacttctttcaggagcacctcagcctggaccagctcagcctg
gatctgtacaagggcagcgttgtcctgcgggatattcacctggaaacctggtctgtgaac
gagttcttgaggtcaatggagtcaccgctggaactggtggaagggtttgtgagctcaatc
gaggtggctgtcccctgggctgcacttctcactgaccactgcactgtgtgtgtgtcaggc
cttcagcttaccctgcagccccgccagggttcaggaccaggggctgcggactctcagagt
tgggcctcatgcatgaccacaagcctgcagctggctcaagagtgccttcgggaagggttg
ccagaaccctcagaaccaccacagcccctggaggggctggaaatgtttgcacagaccatt
gagactgtacttcggaggatcaaggtgaccttcctgagcactgttgtgagggtggaacat
tcactgggtgatgaggaacgaagtgtggctgtggaggtccaagtacagcgactggagtac
tgtgacgaagcagtgcgggaccccagccaggccccacctgtggacgtgcaccagccgcct
gccttcatgcacaagctgctgcagctgagtggggtctgcctatactttgaggagctgccc
tcccaggcagacccgccacagccacctttgcagatcggcagctgcacagggtatgtggag
ctcatggtgaggctgaagcagaacgaggccttcccgggccccaagttggaggtgtcagga
cagctgggatccctgcacctgctcttgaccccgcatcagctccggcagctccagcagcta
ctcagtgccatcaacctcgcagaccccggaggcctggccaacaagctgagcaagagccgc
ccactgggtgctgaagacttgtggctcattgagcaagatctgaaccagcagctgcaggcg
ggtgctgtggccgagcccctcagcctgtaccccatcaccaaccccctcaatttggacaac
gcagacctcttcttctccatggccggcctcacaagcagtgtgacgtcagctgtctctgag
ctctccgtgtacagcgtagacctgggctcctctgttcacagcaacatggccttccatcga
ccctcaaccccaccccactcaggtggcaagatggccccaactccccttctggacaccaca
cgccctgactcgctggtgaagatgaccttgggcggcgtgagcttgaccttgcttcagaca
gcttccccatcttcaggaccacctgacctccccacccacttttttgctgagttcgatgct
gccaaagatgggccatttggctcccgggacttctcccacctccggccacgcttccagagg
gcctgcccttgtagccacgtccggttaacaggcacagctgtgcagctgtcttgggagctg
cgtgcaggcggcaacagcaggagggcaagcagcaccgaagtgcactttggacagctggag
atgctggagtgcctatggcccagggctgccgcagagccagagtacacggagatcctgagc
ttccccagtcactctggctccgaagcttcagcccgaccctgtgcccatctgcgccacaca
cagacccttcgccgggtgctcaagaaccggtcccggcgctccactgcctgccattgtcac
tcagaactgtccctggacctggctgacttccaatctgatgtggagctggggtccctggac
cgccttgctgccttgttccgtcaagtcaccacaccctctgagccacctgctggcctacta
acagagcccccacaggccactgagcagcagacagtgtttcgtctctcagcaccccgggcc
accctgaggctacgcttccccatcccagacctaaggcctgaccgggacccctgggctggc
caggctgtgcggcctgagcagctgcgactggagctaagtgagccccagttccgctcagaa
ctcaacagtgggcctggccccccagctcctacccgcctggaacttacttgctcagacctg
caaggaatttacgaagatggagagaagccaccagtcccctgcctgcgggtctccaaagct
ctggatcccaggagcactgaggccaagtactttctacctcaggtagtggtgaccctgaac
ccccagtccagtggcacacagtgggagacgacagcctctgagaaaggccaggatctggag
ctgtccaccgagagtccgtgtgagctccagcagccctcgccctcgcccttctcctccaag
cggaccatgtacgagactgaggagatggtgatccctggagaccccgaggagatgaggaca
ttccagagccggacactggcgctgtcccgctgtgctctggatgtcatcatgcccagtgcc
cacatcttcctgcccagcaaggagatctacgaaagcatctacaacaggatcaacaacgac
ctgctcatgtgggagcctgcagacctgcttcccacatccaacattgctgctcggccacct
ggctctttagggttcaagatgtgcaagtctgccttcaagctaggtatgagaagtacactg
ccacctattcactcagactctgattcggatgacgaagacacccagttcttctcgatggca
tcaggtgtcccccagactcctgccccagaaccttcccatcgtcactcccagagtaccttc
tccacactggtgacagtgctgaagggtcggatcactgcgttctgtgaggctaaggatgag
actgggaagcggctggatggcactcatggggagctggtactagatgtggagcagggcacc
atcttcagcgtggcccagtactgtggccaaccagggctcggctacttctgcctggaagct
gaaaaggcaaaactctaccatcgagcggccattgaagactacctgctgccaacccacttg
gaagtgcccagctttgctccccccgctcagctagctccaaccatctacccatcagaggaa
ggggtgactgagcgaggaaccttgggccgcaagggccagggtccccccatgctgtccgca
gctgtccgcatccacctggacccccacaagaatgtcaaggaatttttggtgactatacgg
ctgcacaaagccactctacgccactacatggccccacctgaacagagctggcactcccag
ctcctggacttcttggatgtactggatgatcctgtgctgggctacctgcccccaacagtc
atcactattctgcatacacacctcttctcctgtgctgtggactacaggcccctctacctc
cccgtgcgcgtcttggtcactgcggagaccttcactctctccagcaacattgtcatggac
acgtccaccttcctgctgaggttcatccttgatgactccgctctgtacctgtctgacaag
tgtgaggtggagaacctggatctgcggcgagattatgtatgtgtcctggacattgacctc
ctggaacttgtcatcaaaacctggaagggcagcaccgagggcagactgagccagccactg
ttcgagctgcgctgctccaacaacgtggtgcacgtgcacagctgtgctgactcctgcgcc
ctgctggtcaacctgctccagtacctgacaagctcaggcgacctacaccccccacctcgg
ccccccagccctacggagatcgccggccagaagctttcagagagccctgcctccctgccc
tcatgcctacccgtggagacagccctcatcaaccaaggagacctgactgatgcccttctg
gacactgaacggcgcggcctgcgggagctggcccagtcctcgggtggcccacttcctcag
gcctctcccgtctccgtctatctgttcccaggtgaacggagtggggcccaggcccctttg
tctcctcctggggcctcttctcacactttgggttctaaggcaaaggaacatgaaaacgaa
gaggagggggatggagacaccctggacagtgatgagttctgcatccttgacgcccctggc
ctaggcattgcgccccgagacggagagcccattgtgacacagctgcatccaggccctatc
atcgtgcatgatggtcacttctcccagcccctgggaagcactgacctgctgcgtgcgcct
gcccacttcccagtgcccagcagccgtgtggtactacgggaggtctccttcatctggcac
ctctatgggggtagagactttggccttcaccccacttacagagcaagagtaggcctcaca
ggccccagggtctcaccttcccgctcctctggtcccaaccgtccccagaactcctggcgt
acccagggtggcattggacggcaacaccaggtcctcatggagatccagctcagcaaagtg
agcttccaacatgaagtgtacccagaagagtcggccatagctgggggcctgggccaggag
ggggatgagcggccactgtcccgccaggtgctcattgttcaagagctagagatccgagac
cggctggccacctccaagatcaacaagttccttcatttgcacacgagtgagcggctgccc
cggcgcacacactccaacatgcttaccatcaaggcgctgcacgtggctcccaccagcagc
gtcggagggccggagtgctgtctgcgagtctccatgatgcctctgaggcttaatgtggac
caggacgccctcttcttcctcaaggactttttcagcagcctggcagccagcatcaacccc
atggtcccaggggacacgtgtgagggtgagagaccagagacctacagccagcccggcagc
ccccaggaagggcagtctgaggacacagagacagccagcagcccaccggaagctccagga
agtggctacagctcctctgaccagcagcccatctacttcagggagttccgcttcacatct
gaggtgcccatctgcctggattaccatggcaagcatgtcactgtggaccaggtgggcact
ttcatgggactcctaatcggcctggcccagctcaactgctcagagctgaagctcaagagg
ctctgctgccggcatgggctcctgggtgtggacaaggtgctgtgttatgccctcaatgaa
tggctgcaggacatccgtaagaaccaactgcctggcctgctgggaggcgtgggccccatg
cactcggttgtgcagctcttccaagggttccgggacctgctgtggctgcccatcgagcag
tacaggaaagatgggcgcctcattcgggggctgcagcgtggggctgcctcctttgggtca
tccacagcttctgctgctctggaattgagcaacaggctggtccaggccatccaggctaca
gctgagacagtatatgacatcctgtcccctgcgtctcctgtctcccgatccctacaagac
aagcgctcttctcggaagctacgcagaggtcaacaacccgctgacctccgggaaggcatg
gctaaggcttatgatgctgttcgagagggtatcctggatacagctcaaaccatctgtgat
gtggcatcaaggggccatgagcagaagggactgacaggtgctgtggggggtgtgatccga
cagctccccccaaccgtcgtaaaaccaataatcgtagcaacagaggcaacatccaatgtg
ctagggggcatgcgtaaccagatccttccagatgcgcacaaagaccatgctctcaagtgg
cgattggaggaggcccaggactga
DBGET
integrated database retrieval system
