Mus pahari (shrew mouse): 110330106
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Entry
110330106 CDS
T05929
Symbol
Fbxo40
Name
(RefSeq) F-box only protein 40
KO
K10315
F-box protein 40
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mpah04121
]
110330106 (Fbxo40)
Ubiquitin system [BR:
mpah04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110330106 (Fbxo40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box
F-box-like
GHL5
Motif
Other DBs
NCBI-GeneID:
110330106
NCBI-ProteinID:
XP_021065722
Ensembl:
MGP_PahariEiJ_G0016425
LinkDB
All DBs
Position
12:complement(31969330..31987619)
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AA seq
710 aa
AA seq
DB search
MGGARRPPPALHRHCEGCINRHCHVPVEPRVSCLVISCHLLCGATFHMCKESEHTLLCPL
EQVPCLNSENGCPLSMARHKLAKHLQVCPASVVCCSMEWNRWPNVDSETILHENIMKETP
SEECLDTALALQDQKVLFRSLKMVELFPETRDATEDEQAMNGDPSWEETGGAVGGVDARL
VPNSCLPATNGQMMELSQEERDALAKTKEGMDLDKFGKWESMFSKEHAASVLTGFLGKSG
DKTGDVAGKEECSSDGSTGHADSSAERRGPQGSQKPQELPATIEMTGLAPWQDGVLERLK
TAVDAKDYNMYLVHNGRMLIHFGQMPACTPKERDFVYGNLEAQEVKTVYTFKIPVSYCGK
RARLGDAMLKCRPSEHKAVDTSDLGVSVEDLPKSDLIKTTLQCALERELKGHVISESRSI
DGLFMDLATQTYNFEPEQFSSETVLADLLGTGQPRGLHVELHSECVTRRHNKSSSAFTFT
CNKFFRRDEFPLHFKNVHTDIQSCLNGWFQHRCPLAYLGCTFVQNHFRPPGQKAKVIYSQ
ELKTFAIKPEVAPELSEKWKSDHLSGHDRKSLNSLTSLPLEVLQYIAGFLDSISLSQLSQ
VSVLMRNICATLLQERGMVLLQWKKKRYSHGGTSWKVHNQIWQFSSLFSKIKSWEFNEVT
SMSEHLKTCPFNVVERKTDPIRLTSMCQPQEKARESLVSTFRARPRGRHF
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgggcggggcacgcaggcctccacctgcactacacaggcactgtgagggatgcatcaac
cgccactgccatgttccggtggagcccagagtctcctgcctggtgataagctgccacttg
ctctgtggcgccaccttccacatgtgcaaagagtcggagcatacactcctctgccctctg
gagcaggttccatgcctcaactctgagaatggctgccccctctccatggcacgccacaag
ctggctaagcacttgcaggtgtgccccgccagcgtggtctgctgctccatggaatggaac
cgctggccaaatgtggactcagaaacaatccttcatgagaacatcatgaaagagaccccc
agcgaggagtgtttggacacagccctagccctccaggaccagaaggttctcttcagatcc
ttgaaaatggtagagcttttcccggaaaccagagatgcaacggaggatgagcaagccatg
aatggtgatcccagttgggaggagactgggggagccgtcggtggagtggatgccaggcta
gtaccaaattcttgtttgccggcaaccaacgggcaaatgatggagctcagtcaggaggaa
cgagatgcattggcaaaaaccaaagaagggatggacctggacaagtttggcaagtgggaa
agtatgttcagcaaggagcacgcagcctctgttttaacaggtttcttgggaaagagtgga
gacaagactggggatgtggctgggaaagaggagtgctccagtgatggtagcacagggcat
gcagacagttctgctgaaaggagaggaccccagggaagccagaagccccaggaacttccc
gctaccatagagatgacagggcttgctccctggcaagatggtgttctggaaagactaaaa
acagcagtggatgccaaagactataacatgtatctggtacacaacgggcggatgctcatc
cactttgggcagatgcctgcttgtacgcccaaggagagggactttgtttatggcaacctc
gaggctcaagaagtgaagacggtttataccttcaagattcccgtgagctactgcgggaag
cgagctcgcttgggagacgccatgttgaaatgcagaccaagtgaacacaaggctgtggac
acttccgacttgggcgtctctgtggaggacctgcccaaatccgatctcatcaagaccacc
ctccagtgtgctttggaaagagaactcaagggccatgtcatctctgagtccaggagcatc
gatggactctttatggaccttgccacccaaacatacaacttcgagccagaacagttttcc
tcagagacagtgttggctgatctcctaggcactggccagcccaggggcctgcatgtggag
ctccacagtgagtgtgtgaccagaagacacaacaaaagcagctcagcttttacgttcacc
tgcaacaaattcttccgaagggatgaatttcccctgcacttcaagaatgtccacaccgac
atccagtcgtgtctcaatggctggttccagcatcgatgccccctcgcctacttgggatgt
acatttgttcagaaccacttccgcccccctgggcaaaaagcaaaagtgatctacagtcag
gagctgaagacctttgccatcaagccggaggttgctccggagctgagtgagaaatggaag
agcgaccatctctcaggccatgataggaaaagcctgaattctctaaccagcctgcccctg
gaggttttgcaatacattgctgggtttctggacagcatcagcctgtcccagctgtcccag
gtgtcagtactgatgaggaacatctgtgccactttgttgcaagagagagggatggtcctc
ttgcaatggaagaagaaaaggtattctcatggcggcacctcctggaaagtccacaatcag
atctggcagttcagcagcctcttctcaaaaatcaagagctgggagtttaatgaagtcacc
tccatgtctgaacacctgaaaacctgtcctttcaacgttgtggagcgtaagactgaccca
attcgtttgaccagcatgtgccagccccaagagaaggcccgggagagcttagtgtccacc
tttagggcccgaccacggggcagacacttttga
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