Mus pahari (shrew mouse): 110330213
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Entry
110330213 CDS
T05929
Symbol
Fancl
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL isoform X1
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03460
Fanconi anemia pathway
mpah04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110330213 (Fancl)
09124 Replication and repair
03460 Fanconi anemia pathway
110330213 (Fancl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mpah04121
]
110330213 (Fancl)
03400 DNA repair and recombination proteins [BR:
mpah03400
]
110330213 (Fancl)
Enzymes [BR:
mpah01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110330213 (Fancl)
Ubiquitin system [BR:
mpah04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110330213 (Fancl)
DNA repair and recombination proteins [BR:
mpah03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
110330213 (Fancl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
FANCL_d1
FANCL_d2
zf-RING_2
SLX1_C
zf-HC5HC2H
zf-RING-like
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
110330213
NCBI-ProteinID:
XP_021065853
Ensembl:
MGP_PahariEiJ_G0016742
LinkDB
All DBs
Position
13:complement(4299479..4372390)
Genome browser
AA seq
375 aa
AA seq
DB search
MADAEASLLRHFPLLLPQNREKTVYEGFISAQGSDFHLRIVLPKDLQLKKARLLCSLQLK
NILNEYHQVVQQRMKHSPDLTSFMMELKMILEVALKNKQELCVQPPSCSFCKDLLTEIGA
IGWDKLACVESSFSTIKLKADDTSGREHLITVKLKAKYPVEPPDCVVDFPVPFSVSWTPQ
SSLVDVYSQFLVALETLKVFWDVMDEIDEKTWVLEPEKPPRSVTARRIALGKNVSINIEV
DPRHPTMLPEFCFLGADHVTKPLGMKLSGSIHLWDPENSLLQNLKDVLEIDFPARTILEE
SDFSMDCGICYAHHLNGAIPDQVCNNPQCGQPFHQICLYEWLRGLSTSRQSFNVFFGDCP
YCSKPITLKMSGRKP
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgcagaagcaagcctgttgcgccatttcccgctgctgcttcctcagaaccgg
gagaaaactgtgtatgagggattcatctcggctcagggaagtgactttcacctcagaata
gtgctgcctaaggacctgcagctcaagaaggcaagattactgtgtagcttgcagctgaaa
aatatacttaatgaataccatcaagtagtccaacagagaatgaagcactcccctgatcta
acgagctttatgatggagttgaagatgattttggaggttgctttaaagaataaacaagag
ttgtgtgtacaaccaccttcttgcagtttctgcaaagaccttcttactgagataggagcc
attggttgggataaactcgcatgtgtggagagttccttcagcaccatcaagttaaaagca
gatgacacttctggcagagagcacctaatcactgtcaagttgaaggcaaagtatcctgta
gagccaccagattgtgtcgtggactttcctgtcccattttctgtttcctggacaccacag
agctccttggtcgatgtttatagtcagttcttggtggcattagagacactgaaggtgttc
tgggatgttatggatgaaattgatgagaagacctgggtgctggagccagagaaacctccc
cggagtgtgacagcacgcaggattgcattagggaagaatgtttccataaacatcgaggta
gaccctaggcaccctaccatgcttcctgagttttgctttcttggagctgaccatgtgaca
aaacccctgggaatgaagctgagtggtagcattcatttatgggatccagaaaatagtctg
ttacaaaatttgaaagatgttttagaaattgatttcccagctcgtactattttggaagaa
tctgacttcagcatggactgtggaatctgttatgcccatcacctgaatggcgccattcct
gatcaagtgtgtaataatccccagtgtggacagcctttccatcaaatatgtctgtatgag
tggctgagagggttgagcaccagcagacagagttttaacgtcttctttggtgactgtccc
tattgtagtaagccaattaccttgaaaatgtctgggagaaaaccctga
DBGET
integrated database retrieval system
