Mus pahari (shrew mouse): 110330251
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Entry
110330251 CDS
T05929
Symbol
Pkd2
Name
(RefSeq) polycystin-2 isoform X1
KO
K04986
polycystin 2
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mpah03037
]
110330251 (Pkd2)
04040 Ion channels [BR:
mpah04040
]
110330251 (Pkd2)
Cilium and associated proteins [BR:
mpah03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
110330251 (Pkd2)
Ion channels [BR:
mpah04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
110330251 (Pkd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
110330251
NCBI-ProteinID:
XP_021065919
Ensembl:
MGP_PahariEiJ_G0017259
LinkDB
All DBs
Position
13:92679414..92723898
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AA seq
966 aa
AA seq
DB search
MVNSSRVQPQPPGDAGRSPAPRASGPGRLVAGGAGLAVPGGLREQRGLEIEMERIRQAAA
RDPPAGASASPSPPLSSCSRQAWSRDNPGFEAEEDDDDDEVEGEEGGMVVEMDVEWRPGS
RRSASSSVVSSVGARGRGLGSYRGAAHLSGRRRRLEDQGAQCPSPAGGGDPLHRHLPLDG
QPPRVAWAERLVRGLRGLWGTRLMEESNANREKYLKSVLRELVTYLFFLIVLCILTYGMM
SSNVYYYTRTLSQLFIDTPVSKTEKTNFKTLSSMEDFWKFTEGSFLDGLYWKAQTSNYTQ
ADNRSFIFYENLLLGVPRLRQLRVRNGSCSIPQDLRDEIKECYDVYSVSSEDRAPFGPRN
GTAWIYSSEKELNGSSHWGIIASYSGAGYYLDLSRTREDTAAQLAGLRRNFWLDRGTRAA
FIDFSVYNANINLFCVVRLLAEFPATGGVVPSWQFQPVKLIRYVTTFDFFLAACEIIFCF
FILYYVVEEILEIRIHRLSYFRSFWNCLDVVIVVLSVVAMVINIYRTSNAEGLLQFLEDQ
NSFPNFEHVAYWQIQFNNIAAVMIFLVWIKLFKFINFNRTMSQLSTTMSRCAKDLFGFTI
MFSIIFLAYAQLAYLVFGTQVDDFSTFQECILTQFRIILGDINFAEIEEANRVLGPLYFT
TFVFFMFFILLNMFLAIINDSYSEVKSDLAQQKAEMELSDLIRKGCQKALVKLKLKRNTV
DAISESLRQGGGKLNFDELRQDLKGKGHTDAEIEAIFTKYDQDGDQELTEREHQQMRDDL
EKEREDLDLEHSSLARPMSSRSFPRSLDDSEEEDDEDSGHSSRRRGSISSGVSYEEFQVL
VRRVDRMEHSIGSIVSKIDAVIVKLEIMERAKLKRREVLGRLLDGVAEDARLGRDSEIHR
EQMERLVREELERWESDDAASQTGHDVSTQVGLGGQPHPRSSCPPSSQSAEGLEGGGGNG
SANVHA
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggtgaactccagccgcgtgcagccgcagccgcccggggacgcggggcgctcgcccgcg
ccgcgagcgtccgggcccgggcgtctggtggcgggaggcgccggcctggccgtccccggc
ggcctccgggagcagcggggcctggagatcgagatggagcgcatccggcaagcggccgct
cgggatcccccggccggagcctcggcctcgccgtctcctccactttcgtcctgctccagg
caggcgtggagccgcgacaacccgggctttgaggcagaggaggatgacgacgacgacgag
gtggaaggagaagaaggagggatggtggtagagatggacgtggagtggcgcccgggcagc
cggaggtcggcctcctcctcggtcgtgagctcggtgggcgcccgcggccgagggctcggg
agctaccgcggcgcggctcacctgagcgggaggcggcgccggctagaggaccagggcgcg
cagtgtcccagccctgcgggcggcggggatccgctacatcgccacctcccgctggacggc
cagccgccccgagtggcctgggcagagaggctggtgcgcgggctgcgaggtctctgggga
acaagactcatggaagaaagcaacgccaacagagagaagtacctgaaaagtgtgttacgg
gagctggtcacttacctcttttttctcatagtcttgtgcatcttgacctatggcatgatg
agctccaatgtgtactactatactcggacactgtcacagctattcatagacaccccagtg
tcgaaaacagagaaaaccaactttaaaactctttcttccatggaggacttctggaagttc
acagaaggctccttcctggatgggctgtactggaaggcacagaccagcaactacactcaa
gctgacaaccgaagctttatcttctatgagaacctgctgctaggagtgccgcgtctacgc
caactccgagtcagaaacgggtcctgctccatccctcaggacctgcgagatgaaattaaa
gagtgctatgacgtctactccgtcagcagtgaggacagggctccgtttggaccgcggaac
ggaactgcgtggatctactcaagtgagaaggagctgaatgggagcagtcactggggaatc
attgcgtcatacagtggagcaggttactacctggatctgtccagaaccagggaggacaca
gctgcccagcttgctggcctcaggaggaacttctggctggaccggggcacgcgggcagct
ttcatcgacttctcggtgtataacgccaacattaacctgttctgtgtggtcaggttattg
gcggagttcccagcaacgggtggcgtggtgccctcttggcagtttcagcctgtaaaactg
atccgctatgtcacaacctttgatttcttcctggcagcctgtgagatcatcttttgtttc
tttatcctttactatgtggtggaagagatattggaaattcggattcacagactgagctat
ttcaggagtttctggaattgtctggatgttgtgattgtcgtgttatccgtagtagctatg
gtgattaacatttaccgaacgtcaaatgcagaggggctactacagtttctcgaagatcaa
aattctttccccaactttgagcatgtggcatactggcaaatacagttcaacaatatagct
gctgtcatgatatttttggtctggattaagctcttcaaattcatcaattttaataggacc
atgagccagctctccacaaccatgtctcgatgtgccaaagacctcttcggcttcactatc
atgttctccatcatcttcttggcatatgcacagctggcataccttgtctttggcacccag
gtcgatgacttcagtactttccaagaatgtatcctcacccagttccgcatcattttgggt
gatatcaacttcgcagagatcgaggaagctaaccgagttttggggccactttattttact
acatttgtgttctttatgttcttcattcttttgaatatgttcctggcgatcatcaatgat
tcgtactctgaagtgaaatccgatctggcccagcagaaagcagaaatggaactctcagac
cttatcagaaagggatgccaaaaagcactggtcaaactaaaacttaaaagaaacaccgta
gatgccatttcagagagtctccggcaaggcggtggcaagctaaacttcgatgagcttcgg
caagacctgaaagggaagggccatacagatgcagagattgaggccatattcactaaatat
gaccaggacggcgaccaggaactgactgagcgtgagcatcaacagatgagagatgacttg
gagaaagagagggaggacctagacttggaacacagctctttagcacgtccgatgagcagc
agaagtttccccagaagcctggatgactctgaggaggaggatgacgaagacagtggccat
agctccaggaggaggggaagcatctccagtggggtttcctatgaagagttccaagtactg
gtgaggcgagtggaccgcatggagcactccattggcagcattgtgtccaagattgacgct
gtgattgtcaagctggagatcatggagcgggccaagctgaagagacgagaggtgttagga
cggctgctggatggtgtggctgaggatgcgcgactgggtcgggacagtgagatccacagg
gagcagatggagcgcctggtgcgggaagagctggagcgctgggaatcggatgatgcagct
tcgcaaacaggtcatgatgtaagcacacaagtgggactcggtggtcagccgcatcccaga
agctcgtgccctccttcctcgcagtctgcagagggcctggaaggtggaggtggaaacgga
agtgccaacgtccatgcgtaa
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