Mus pahari (shrew mouse): 110330259
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Entry
110330259 CDS
T05929
Symbol
Dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110330259 (Dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mpah03041
]
110330259 (Dhx15)
03009 Ribosome biogenesis [BR:
mpah03009
]
110330259 (Dhx15)
Enzymes [BR:
mpah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110330259 (Dhx15)
Spliceosome [BR:
mpah03041
]
Complex A
U2 snRNP components
U2 related factors
110330259 (Dhx15)
Complex B
110330259 (Dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
110330259 (Dhx15)
Ribosome biogenesis [BR:
mpah03009
]
Eukaryotic type
90S particles
Helicases
110330259 (Dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Atrophin-1
AAA_29
Flavi_DEAD
AAA_25
Motif
Other DBs
NCBI-GeneID:
110330259
NCBI-ProteinID:
XP_021065932
Ensembl:
MGP_PahariEiJ_G0016996
LinkDB
All DBs
Position
13:complement(44281506..44321149)
Genome browser
AA seq
795 aa
AA seq
DB search
MSKRHRLDLGEDYPSGKKRAGTDGKDRERDRDREDRSKDRDRERDRGDREREREKEKEKE
LRASTNAMLISAGLPPLKASHSAHSTHSTHSTHSTHSAHSTHTGHAGHTSLPQCINPFTN
LPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRS
LPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM
LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKF
QIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQE
EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS
TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGK
CFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCF
VRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNV
RQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQ
LHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQL
DRIIAKLQSKEYSQY
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagaggcaccggttggacctgggggaggattacccctccggcaagaagcgtgcg
gggaccgatgggaaagaccgggaacgagatcgggatagagaggaccgatctaaagatcgt
gaccgagaacgtgatagaggagacagagaacgggagagggagaaagaaaaggagaaagaa
ttgagagcttccaccaatgctatgcttatcagtgctggcttgccacctttaaaagcttct
cattcagctcactcaacccactcgactcattcaacacattctacacattctgcccattca
acacacactggacacgcaggacacacatcacttccacagtgcattaatccatttaccaac
ctgccccatactcctcgatactatgatattctaaagaaacgacttcagctccctgtttgg
gaatacaaggatagatttacagatattcttgttagacaccagtcatttgtactcgttggt
gagactgggtctggtaaaacaacacagataccacagtggtgtgtggagtatatgcgatct
ttgccaggacccaaaagaggagttgcctgtacacagcccaggagagtggctgcaatgagt
gtggctcagagagttgctgatgagatggacgtgatgttaggccaggaagttggatactcc
attcgatttgaagactgcagtagtgcaaaaaccattcttaagtatatgactgacgggatg
ctacttcgtgaagccatgaatgatcccctcctggagcgctatggggtgataattcttgat
gaggcccatgaaagaacattggctacagatattctcatgggggttctaaaggaagttgta
agacagagatcagatttaaaggttatagttatgagtgctaccctagatgcggggaaattc
cagatttactttgataactgtcctctcttaactattcctggccgaacacatcctgttgag
attttttatactccagaaccagagagagattatcttgaagcagcaattcggacagtgatc
caaatacatatgtgtgaagaggaggaaggagaccttcttcttttcttgactggtcaagag
gaaattgatgaggcctgtaagagaataaagcgtgaagttgatgatttgggccctgaagtt
ggtgatattaaaatcattccattatattctacacttccaccccagcagcaacaacgcatt
tttgagccaccacctccaaaaaaacagaatggagcaattggaagaaaggtggtggtgtca
actaatattgcagagacctctttgacaatagatggtgtggtgtttgtaattgaccctgga
tttgcaaaacaaaaggtatataatcctagaatcagagttgagtctctactggtgaccgca
attagtaaagcttcagctcagcaaagggctggccgagctggacgcaccagacctgggaaa
tgcttcaggctttatacagagaaagcttataaaacagaaatgcaggataacacctatcct
gagattctgcgttctaatttaggatcagttgtattacaattgaagaagcttggtattgat
gacttggtacattttgattttatggacccaccagctcctgaaactctgatgagagcccta
gaacttttgaattatttggctgctttaaatgatgatggagatctgactgaattgggatcc
atgatggcagagttccctttagatccacagctcgctaaaatggttattgcaagttgtgac
tacaactgttctaatgaggtcctatctattactgctatgttgtcagtcccacagtgtttt
gttcgccccacggaggccaagaaagctgcagatgaggccaagatgagatttgcccacata
gatggagatcatctgacactgctgaatgtctaccacgcttttaaacaaaatcatgaatct
gttcagtggtgttatgacaacttcattaactaccggtccctgatgtctgcagacaatgta
cgccagcagctatcaagaattatggacagatttaatttgcctcgtcgaagtactgatttc
acaagcagggactattatattaatataagaaaagcgttggttactgggtattttatgcag
gtggcacatttagaacgaacggggcattatttaactgtgaaagataaccaggtggtccag
ttgcatccctctactgtgcttgatcacaagcctgaatgggtactttataatgagtttgtg
ctgacaacaaagaattatatccggacatgtacagatatcaagccagaatggttggtgaaa
attgcccctcaatattatgacatgagcaatttcccacagtgtgaagcaaagagacagttg
gaccgcattattgccaaacttcaatccaaggaatattcacagtactga
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