Mus pahari (shrew mouse): 110330373
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Entry
110330373 CDS
T05929
Symbol
Patz1
Name
(RefSeq) POZ-, AT hook-, and zinc finger-containing protein 1 isoform X1
KO
K24383
POZ-AT hook zinc finger protein 1
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110330373 (Patz1)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
110330373 (Patz1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
BTB
zf-H2C2_2
zf-C2H2_assoc3
zf-met
zf-C2H2_6
zf-C2H2_jaz
zf-Di19
zf-C2H2_3rep
zf-C2HC_2
GAGA
zf-C2H2_8
Motif
Other DBs
NCBI-GeneID:
110330373
NCBI-ProteinID:
XP_021066030
Ensembl:
MGP_PahariEiJ_G0016884
LinkDB
All DBs
Position
13:complement(25963807..25983033)
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AA seq
687 aa
AA seq
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MERVNDASCGPSGCYTYQVSRHSTEMLHNLNQQRKNGGRFCDVLLRVGDESFPAHRAVLA
ACSEYFESVFSAQLGDGGAADGGPADVGGAAAAPGGGAGGSRELEMHTISSKVFGDILDF
AYTSRIVVRLESFPELMTAAKFLLMRSVIEICQEVIKQSNVQILVPPARADIMLFRPPGT
SDLGFPLDMTNGAAMAANSNGIAGSMQPEEEAARATGAAIAGQASLPVLPGVDRLPMVAG
PLSPQLLTSPFPNVASSAPPLTSKRGRGRPRKANLLDSMFGSPGGLREAGILPCGLCGKV
FTDANRLRQHEAQHGVTSLQLGYIDLPPPRLGENGLPISEDPDGPRKRSRTRKQVACEIC
GKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGK
GFSRPDHLNGHIKQVHTSERPHKCQTCNASFATRDRLRSHLACHEDKVPCQVCGKYLRAA
YMADHLKKHSEGPSNFCSICNRGFSSASYLKVHVKTHHGVPLPQVSRHQEPILNGGAAFH
CARTYGNKEGQKCSHQDLIESSDSYGDLSDASDLKTPEKQSANGSFSCDVAVPKNKMESD
GEKKYPCPECGSFFRSKSYLNKHIQKVHVRALGGPLGDLGPALGSPFSPQQNMSLLESFG
FQIVQSAFASSLVDPEVDQQPMGPEGK
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggtcaacgacgcttcttgcggtccgtcgggctgctacacctaccaggtgagc
agacacagtacggagatgctgcacaacctgaaccaacaacgcaaaaacggcgggcgcttt
tgcgatgtgctcctacgggtaggcgacgagagcttcccagcgcaccgcgccgtattggct
gcctgcagcgagtactttgagtctgtgttcagcgcccagttaggcgacggcggagctgca
gacggtggtcctgctgatgtgggaggcgcggcggcggctccaggcggcggggctggaggc
agccgcgaactggagatgcacaccatcagttccaaagtgttcggagacatcctggacttc
gcttacacgtcccgaatcgttgtgcgcctagagagcttccccgagctcatgacggccgcc
aagttcctgctgatgaggtcggtcatcgagatctgccaggaagtaatcaaacagtccaac
gtgcagatcctggtgccccctgcccgggctgatatcatgctctttcgccctcctgggact
tctgacttgggcttccctttggacatgaccaacggggcagctatggcagccaacagtaac
ggtattgctggcagtatgcagcccgaggaggaggctgccagggccacaggtgctgctatt
gcgggccaagcttccctgcctgtgttacccggagtggacagattgcccatggtggctgga
cccctatcccctcaactactgacttctccattccccaatgtggcatccagtgcacctcca
ctgactagcaagcgaggccggggacgccccaggaaggccaacctgctggactccatgttt
gggtctccagggggcttgagggaagcaggcatccttccatgtggcctgtgtgggaaggtg
ttcactgacgccaaccggctccggcaacatgaggcccagcacggcgtcacaagcctccag
ttgggctatatcgatcttcctcctccaaggctgggtgagaatgggttacccatctccgag
gaccccgacggccccagaaaaaggagccggaccaggaagcaagtggcttgtgagatctgt
ggcaagatctttcgagatgtgtaccatctcaaccggcataagctgtcccactcgggggag
aagccttactcgtgcccggtgtgtggtctgcggttcaagcgaaaagaccgtatgtcgtac
catgtgaggtcccatgatgggtcagtgggcaaaccgtacatctgccagagctgtgggaaa
ggtttctccaggccggaccacttgaatggacatatcaagcaggtgcacacttccgagcga
cctcacaagtgtcagacctgcaatgcctcctttgccactcgagaccgcctgcgctcccac
ctggcctgtcatgaagacaaggtgccctgccaggtgtgtggaaagtacttgcgggcagcg
tacatggcagaccacctgaagaagcacagtgaggggcccagcaacttctgcagcatctgt
aaccgaggtttctcctctgcctcctacttaaaggtccatgttaaaacccaccacggtgtt
ccccttccccaggtctccaggcaccaggaacccatcctgaatgggggagcagcgttccac
tgcgccaggacctatggcaacaaagaaggccagaaatgctcacatcaggatctgattgag
agctccgattcctacggtgacctctcagacgccagtgacctgaagacgccagagaaacag
agtgccaacggctccttctcctgcgacgtggcagtccctaaaaacaaaatggagtctgac
ggggagaagaagtacccatgccctgaatgtgggagcttcttccgttctaagtcctacttg
aacaaacacatccagaaggtgcatgtccgtgcccttgggggtcccttgggggacctgggc
cctgcccttggttcacctttctctccccagcagaacatgtctcttctcgagtcttttgga
tttcagattgttcagtcagcgtttgcttcatctttagtggatcctgaggtggaccagcag
cccatggggcctgaagggaagtaa
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