Mus pahari (shrew mouse): 110330377
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Entry
110330377 CDS
T05929
Symbol
Bod1l1
Name
(RefSeq) biorientation of chromosomes in cell division protein 1-like 1 isoform X1
KO
K27262
biorientation of chromosomes in cell division protein 1-like 1
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpah03400
]
110330377 (Bod1l1)
DNA repair and recombination proteins [BR:
mpah03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
110330377 (Bod1l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COMPASS-Shg1
Motif
Other DBs
NCBI-GeneID:
110330377
NCBI-ProteinID:
XP_021066040
Ensembl:
MGP_PahariEiJ_G0016972
LinkDB
All DBs
Position
13:complement(34785404..34842444)
Genome browser
AA seq
3044 aa
AA seq
DB search
MATNPQPQPPPPAPPPPPPQPQPPPPPPGPGAGPGASGPGGAGTGSGDPQLVAMIVNHLK
SQGLFDQFRRDCLADVDTKPAYQNLRQRVDNFVANHLATHTWSPHLNKNQLRNNIRQQVL
KSGMLESGIDRIISQVVDPKINHTFRPQVEKAVHEFLATLNHKEEAAGSTAPDDEKPESS
VITQGAPAPGPSANVASDAMSILETITSLNQEANAARASTELSNAKVSERISRRLSSQPS
TDVSTDRERGSEDATEREKATPDSGGDGLETAPKSEEPSDLPCPVEETKNHLKENNSLLL
LSKDAQQENNDPKIKSTDRGEKKPDGNEKGERKKEKKEKTEKKIDHSKRNEDTQKVKDER
QAKDKEVESSKLPSEKSNSRARAAEGTKEDCSLVDSDVDGLTDITVSSVHTSDLSSFEED
SEEEVVMSESMEEGEITSEDEEKNKQNKTKAQPGDSSDGKARSVRHAYVHKPYLYSKYYS
DSDDELTVEQRRQSIAKEKEERLLRRRINREKLEEKRKQKAEKTKSSKVKSQGKSSVDLE
DSSTKTLEPKAPRIKEVLKERKVLEKKVALSKKRRKDSRNVDENSKKKPQAEEESKEALK
TSEHCEKEKASSKDLRHTHGKGEPSRPARRLSESLHSADENKTESKVEREYKRRTSTPVI
LEGAQEETDTRDGKKQPERAETSVEETQKQKSTLKNEKYQKKDDPETHGKGLPKKEAKSA
KERPEKEKAQSEEKSSSKHKHKGDGVHKMSDETELHSSEKSETEESVRKQGQQTKLSSDD
KTERKSKHKNERKLSVLGRDGKPVSEYTIKTDEHARKDNKKEKHLSSEKNKAEHKSRRSS
DSKLQKDALSSKQHSVTLQKRSESCSEDKCETESTNADSSLKPEELLHKERRRTKSLLEE
KVVSKSKSKGQSKQTKAAETESQEGVTKQVTTPKPDKEKNTEDNDTERQRKSKLEDRTSE
ETVTDSALENAVPSAHSAQKDSGHRAKLASIKEKHKTDKDSTSSKLERKVSDGHRSRSLK
HSNKDMKRKEENKPDDKNGKEVDSSHEKGRGNGPVTEKKLSRRLCENRRGSTPQEMAKED
KLAANMSGATSSSSLQRPKKSTETASIPEQEPMEIDSEAAVENVSELSKTEDISSNSSQQ
DTDFENVTKHKATAGVLKDELRTSMVDSKPAAAVTCKSGRGLAVTSASEKHSDHKSTLTK
KVHSQSNPSKATPREREPVQRGAQEVSVDAEVSRKALSRALSENEKGQKNLKGMSKTTEE
CGTHRNASLAYSTDSDLLSSSGSVTVVPQKESHNSNTIPVIDREAMSEGGRASTSLVNHS
DVPNQDLTVKKSEVHKTNGSKEGNDGFTVDMPTKASGGSKRHLSEDSQATLLYSKEGKIS
IPLADKSMSMTGENKNINKQRSLMGIAKKESDLKVNPDIKQDGAAGEHVVDLSTRKEAET
VRRKHNKEMPTDVERKTENSQVDTSARRDSAPVPQQRHGKMERGAAGSGRRDKAFIATST
EGTDKGIMLNTVKTGDATTTSSEVGEKGTALPCTSIEADEGFMMGACPKKHPLQVGAEAS
ECTVFAAAEEGKGVVTEGFAESEILLTSSKEGESGECAVAESEDRVAGPLAAHTVQAEAN
VNSITTEEKDDAVTSAGSEEKCGGSSCAVEGTATFIGEVESDGAVTSAGTEIRAGSLSSE
DVDGSQENRIQVGSKKETEGTVTCTETKGRNDNFICLVTRVGTQEQRVVTGADVVQVNDD
KAQEANTNQAGDGSGTDGTEGESAVTSTGITEEDGEASANCTGSEDNNREGCAISSETEE
NAESAMDSTEAKDITNAPLVAAGPCDDEGIVTSTGAKEEDDEDEGVVTSTGRGNEPGHAS
ACTGIEESEGMIVCESGERGAQIGPTIDHVNAEAGAATVNTNDSNVDSMSGAEKEIKDTN
ICSSAKGIVESSVTSALAGNSDRPPVLHGSEGPMASATSHHSDSQLTRKETVEDTTISTG
LVRGSDDVLVSGAVPECEVGHMSPRENEECDGLMASTASCDVSNKDSLAGSKSQGNGLMI
STSTNDCTPQISAVIDVRRGHLCTLSTEENRDATRVHREGFEAPMPSAISGENSQLTASR
SEEKDECAMISTSIGEEFDLPISSAVTVTCAERQQPVAAVEESTTGPALVSTEDFEVPMP
SAPTEAESPLASTSKEEKDECALISTSIAEECEASGSGVSGNAPSVTDGNAVISTSSVED
CEGSVSSAVPQESVCPSVIPVEETGDTAMISTSTSEGREAVMVGTIPTDDDQASTVRGED
LSDAAIISTSTAECVLTCTSLSRHEENQQVSHNPEGNGGHLATEQSKCELPMPSLVAESN
FKCPGPFTMGKGVGPLMAVGTRGEHDRLPVCEPSAEQGQPGTALCLGEEESHGMDCPGQD
LTAKERNTLLSSVQRESKSAEAEAAEDSSTARGIVRKASERNANSLSETNCLREPEQKSA
EDSSGSIHYLTAVNTGAKTDDMLPITDAALEYPDHQEPENNLKTTTKCITGQESKMPSSH
TGVLPAVSHVAPCASKQEGGMPTKSDHSGTWTSEGSAEKMRHVAGARQSFHREGNLDVTL
PPGDNGCGIGNEKSPPKGIGGLKLLTGLTTEISVRSEEDTSHGVVAAPENACVGRRRGAA
ELQMEALLMSESLNVENSESRINEEIHFESQNKEEICCGRKGSTEALSGCSVEADPEEVE
EEERQISKRNKKPGYSSEEELDDSPDVLDSRTETAQRQYAETEPHDTKEENSRDVEELSS
VTSKTNSSTGLEDRDEFSSSEGTGEKTEPNEDDGNIKSQEDDQPIIIKRRRGRPRKYPAE
TAFKSIEDSKTETDITTVEQSSPSGKLKVSQADESNKEIANLQEKSASNDDSEEKAASVH
LRGRKSKRSLTSSDDAESSEPERKRQKSLSETSEDKKDEESDEEEEEEEEEEEEEEEEKE
EEEPLGATTRSATRSEAQRKNHSKPSTRATSKLGIPETISPRNRLKLAKEKLSTNEKVSK
SPPLGRSKAQLSPSVKRKREVSPPGARTRGQQKVDENPLKKAKR
NT seq
9135 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaacccgcaaccgcagccgccgccgcccgcgcctccgccgccgccaccgcag
ccacagcctccgccgccgccgccgggccctggggctggccccggagcgagcgggccggga
ggcgcggggactggctccggggacccgcagctcgttgccatgatcgtaaaccacctcaag
agccaggggctcttcgaccagttccgcagggactgcctggccgatgtggacaccaagcct
gcctatcagaatctgaggcagagagttgacaacttcgttgcaaaccacttggcaactcat
acatggagtccccacctcaacaagaaccaactgagaaacaatatccgacagcaagttctg
aaatcaggaatgctggagtctggtattgaccgaattatttctcaggttgtggatccaaag
atcaaccacacattcaggcctcaggtagaaaaagctgtgcacgagtttctggccacattg
aatcacaaagaggaagcagctggcagcacagctcctgatgatgagaagccagaatcttct
gtcattacccaaggtgctcctgctcctgggcccagtgctaatgtagccagtgatgccatg
tcaatcttggaaaccataacttctcttaaccaagaagctaacgctgccagagcttcaaca
gaattgtcaaatgccaaggtcagtgagagaatatccagaagactctcatctcagccgagc
acggacgttagcacagacagggagaggggctcagaagatgcgactgagagagaaaaggct
acccctgattctggaggagatgggctagaaactgctcccaagtcagaagaacctagtgat
ctcccttgtccagtggaagaaactaaaaatcatctgaaagagaataatagcttactgtta
ctaagtaaggatgctcagcaggaaaacaatgacccaaaaattaaatcaacggacagagga
gaaaagaaacccgatggtaatgagaaaggagagagaaagaaggaaaagaaggaaaagact
gaaaaaaaaattgatcactctaaaaggaatgaagatacacagaaagtgaaagatgagaga
caagcaaaagacaaagaagtggagagctcaaagcttccttctgaaaagagcaacagcaga
gccagggctgctgaggggacaaaagaagattgttctttggtagattctgatgtggatggt
ctcactgatatcacagtcagctctgtccacaccagtgacctttcatcctttgaagaagac
tcagaggaggaggttgttatgtctgagagcatggaagaaggagagattacatcagaggat
gaagagaaaaacaagcagaataaaacaaaagctcaacctggtgattctagtgatggaaaa
gccagaagcgtacggcatgcttatgttcacaaaccttatctttactcaaagtactacagt
gattctgatgacgaactcacagtggagcaacggcggcaatccattgctaaagaaaaagaa
gagagacttttaagaagacgaatcaatagagagaaacttgaagaaaaacgaaagcagaaa
gcagaaaagacaaaatcttctaaagtgaagagccaaggcaaaagtagtgtggatctagaa
gactcatcaaccaagactttggaacccaaagccccaagaattaaagaagtccttaaagaa
cggaaagttttagagaagaaagtagccttaagcaaaaaaagaagaaaagattcaaggaat
gttgatgaaaattccaaaaagaaacctcaggctgaggaagagtccaaagaagccctgaaa
acaagtgagcactgtgaaaaagaaaaggcctcttccaaggacctcaggcacactcatggg
aaaggtgaaccaagtagacctgccaggaggctgtcagagtctctgcattcggccgatgaa
aacaagactgaatcaaaagtagaaagagaatataagcgacggacatccactcctgttata
ttggaaggagctcaggaagaaacagataccagagatggaaaaaagcaaccagaacgcgca
gaaactagtgtggaagaaacccagaagcagaaaagcacccttaaaaatgaaaagtatcaa
aagaaagatgatcctgaaacacatgggaaaggcctacctaaaaaagaggcaaagtctgcc
aaggagagacctgagaaagagaaagctcaatcagaagaaaagtcatcgtcaaaacacaaa
cacaaaggtgacggtgtgcataaaatgagcgatgagactgaacttcactcttctgagaag
agtgaaacagaggaaagtgttcggaagcagggtcaacaaacaaaactttcttcagacgat
aaaactgaacgtaaaagtaaacacaagaatgaaaggaaattgtcagtattgggtagagat
gggaagccagtttctgaatacactataaaaacagatgagcatgcacgtaaagataacaaa
aaggagaagcacctatcatccgaaaaaaacaaggctgagcacaaatcaaggaggtcaagt
gactctaaactgcagaaagacgctctaagctccaagcaacacagtgtaaccttgcagaaa
agaagcgagagctgttccgaagataagtgtgagacagagtccactaatgctgatagcagc
ttaaaaccagaagagcttcttcataaggagaggcgacgaacgaagagcttgttagaagag
aaggttgtgtcaaaatctaaatcaaaaggtcaaagcaaacaaacaaaggctgctgaaaca
gaatcacaggaaggtgtcaccaaacaggtgacaactccaaagcctgataaagagaaaaac
acagaagacaatgacacagaaaggcagcgcaagtccaaacttgaagacagaacttctgaa
gaaactgtcactgactctgcattagagaatgctgtaccttcagcacatagcgcgcagaag
gactctggacacagagctaagttagcgtcgattaaagagaagcataagacagataaagac
tcaacctcctctaaacttgagaggaaggtctcagatgggcacagaagcagaagcttaaag
catagtaataaagacatgaaaaggaaagaagaaaataagccagatgacaagaatggtaaa
gaagttgacagcagtcatgaaaagggcagagggaatggcccagtcacagaaaaaaaacta
agtagaaggctgtgtgaaaaccgaagaggaagtacgccacaggaaatggccaaggaagat
aagttagcagcaaacatgtcaggcgctaccagtagttcctctctgcagagaccaaaaaaa
agcacagaaaccgcatcgatccccgaacaagagcctatggaaattgattctgaggcagct
gttgaaaatgtgtctgaactttctaaaactgaggacatcagtagtaacagttctcagcaa
gacactgactttgaaaatgttacaaaacataaagccactgctggagttttaaaggatgag
ttaagaacttccatggtagattcaaaaccagcagcagctgtgacatgtaaatcggggcgt
ggactagcagtaacaagcgcttctgaaaaacattctgaccataaaagcaccttgaccaag
aaagtgcatagccaaagtaatccatcaaaagccacccctagggagcgagagccagttcag
cgaggagcccaggaagtaagtgtagacgctgaagtgagtcggaaagccctctctagggcc
ctctcagaaaacgagaagggccagaagaatttgaaaggcatgtccaaaaccactgaagaa
tgtggcactcacagaaatgcttctcttgcatactctacagactcagacctcttgtcatcc
tcaggctctgtgactgttgttcctcagaaagaatctcacaattcaaatacaattcctgta
attgacagagaagccatgtcagaaggtggcagagccagtacctcccttgtaaatcattct
gatgtccctaaccaagatttgactgttaagaagtcagaagtccataaaacaaatggcagc
aaagaaggtaatgatggcttcacagtggatatgccaacaaaagcaagtggtggtagcaaa
aggcacctttctgaagatagccaggccacattgctgtacagtaaagaaggcaaaataagc
atacctcttgctgacaagtcaatgagcatgactggggaaaataagaacattaacaaacaa
aggagcctgatgggcatagccaagaaagagagtgatctgaaagtaaatcctgatataaag
caagacggtgctgcaggcgagcatgtcgtagacctgagtacaagaaaggaggctgagaca
gtcagacgtaagcataataaagaaatgccaactgatgttgaaaggaagactgaaaacagt
caagtagacaccagtgctaggcgtgattctgcccctgtgccacagcaaaggcacgggaaa
atggagaggggggcagctggatctggtagacgagacaaagcttttattgctactagtact
gaagggacggacaaaggcatcatgttaaacacagtcaagactggagatgccaccaccact
tcatcagaagtaggagagaaggggacggctttaccttgcaccagtattgaggcggacgaa
ggcttcatgatgggtgcatgccctaaaaaacatcccctccaggttggggcagaagccagt
gaatgcactgtttttgctgcagctgaagagggtaagggtgttgtcacagaaggatttgct
gaaagtgagattttgcttacaagctccaaggaaggagaaagtggagaatgtgctgtggct
gagtcagaagacagagtagcaggtcccttggctgctcatacagttcaagctgaagccaat
gtgaacagtattacaacagaggaaaaagacgatgcagtaaccagtgcaggctctgaggaa
aagtgtggtggttcttcatgtgcagttgaggggacggctacttttattggtgaagttgaa
agtgatggagctgttacaagtgcagggacagaaataagagcaggatctctgagcagtgaa
gatgttgatggatcccaagaaaataggatacaagttggttctaaaaaagaaacggaaggc
accgtgacatgtactgaaaccaaaggaagaaatgataacttcatttgcttggtaactaga
gtaggaacccaagagcaacgtgtagttacaggtgcagatgtggtccaagtaaatgatgat
aaagcccaagaggcaaataccaatcaagcaggagatggttctggaactgatggtacagaa
ggtgagagtgcagtcaccagcacgggcattaccgaagaagatggggaagcatcagcaaat
tgcacaggctcagaagacaacaacagggaaggctgtgccataagttctgaaacagaagaa
aatgcagagagtgccatggacagcacagaagccaaagacattactaatgcacctttggtg
gctgctggtccctgtgatgatgaaggcattgtgaccagcacaggtgcaaaagaagaggat
gatgaggacgagggtgttgtgactagtactggaagaggaaatgaacctggacatgcttca
gcttgcacagggatagaagaaagtgaaggaatgatagtttgtgagagtggagagaggggt
gctcagattggccctacaatagaccatgtgaatgctgaggctggggcagcaactgtgaat
acaaatgacagtaatgttgatagtatgagtggtgcagagaaggaaatcaaggacaccaac
atctgttccagtgccaaagggattgtggaaagcagcgtaaccagtgccttggcaggaaac
agtgacaggccaccagttctacatggtagtgagggtcctatggctagtgcaacttctcac
cacagtgacagtcagcttaccaggaaagaaacagtagaagatacaactatttccactggc
ttggtgaggggcagtgatgatgttcttgtgtctggtgcagttccagaatgtgaagttggc
cacatgtcacccagggaaaatgaagagtgcgatggccttatggcttctacagccagttgt
gatgtttccaacaaggacagcttagcagggagtaaaagtcagggcaatggcttgatgatt
tccactagtacaaatgattgcacccctcagataagtgcagtcatagatgtgagaagagga
catttgtgcactctgagcactgaagaaaatagggacgccaccagagtacacagggaagga
ttcgaggctcctatgcccagtgcaatttcaggtgagaatagccagctcactgctagcaga
agtgaagaaaaggatgagtgtgctatgatttccacaagcataggggaagaatttgacctt
cctatttctagcgctgttacagtcacatgtgctgaaaggcagcagccagttgcagcagtt
gaggaaagcaccacaggtccagccttggtaagcactgaggactttgaggtgcctatgccc
agtgctcccactgaagcggaaagccctcttgcctcaaccagcaaagaagagaaggatgaa
tgtgctctcatttccaccagcatagctgaagagtgtgaagcctctggctctggtgtaagt
ggaaatgcaccatctgttaccgacgggaatgcagtcatctcgacaagttcagtggaagac
tgtgaaggctctgtgtccagtgctgtccctcaggagtccgtctgtccctcggtcatacca
gtagaggagacaggtgacactgccatgatttccacaagcacctctgaaggacgcgaagct
gtcatggttggtactatccctacagatgatgaccaggccagcactgtgagaggggaggat
ttgagtgatgccgccattatctccaccagcacagcagagtgtgtgttgacgtgcactagc
ttaagcaggcatgaagagaatcagcaagtctcacacaacccagaaggaaatggtggacat
ttagctacagagcaaagtaagtgtgaactacccatgcccagcctcgtggctgagagtaat
tttaagtgccctgggccattcacgatgggcaaaggagtaggtcctttaatggcagtaggc
accaggggggagcatgacaggttgccagtctgtgagccttcagcggaacaaggccagcca
ggcactgctttgtgcttaggagaggaagaaagtcatggcatggactgccctggtcaagac
ctcactgcaaaagaaaggaatacattgctgagctctgttcagagggagagcaaaagtgca
gaggcagaggcagccgaggacagtagcacagccaggggaatagtgagaaaggcctcagag
aggaatgcaaactcactatctgagacaaactgtctgagagaaccagaacagaagtctgct
gaggattcctctggcagcattcactatctgacagcagtaaatactggtgctaaaactgat
gacatgctgcccatcacagatgctgcattggagtatcctgaccaccaggaacctgagaac
aacttgaaaactaccaccaaatgtattacaggccaagagtcaaaaatgccttcttcccac
acaggagtccttccagctgtcagccatgtagctccatgtgcttcaaaacaggaggggggc
atgcctacaaaaagtgaccacagtggcacgtggactagtgaagggtcggctgagaaaatg
agacatgttgctggtgcaaggcagtcattccacagggaaggaaaccttgatgtcactctt
cctcctggggataatgggtgtggcataggcaatgaaaagtcaccaccaaagggtatagga
ggattgaaactgttgactggcttaacaactgagatatctgtgagatcagaggaagataca
agtcatggagttgtagcggcaccagagaacgcatgtgttggaaggcggagaggggcagct
gaactacagatggaagctttattgatgagtgaatcactaaatgttgaaaattcagagtca
agaatcaatgaagaaattcactttgaatctcaaaataaagaagaaatatgctgtggtaga
aaaggcagcacggaagctctgagcggttgcagtgttgaagcagatcctgaagaggttgaa
gaggaagaaaggcaaatatctaaaagaaacaaaaagccgggttactcctcagaagaagaa
ctagatgatagcccagatgtcctggattccagaacagaaacagcacagagacagtatgct
gagactgagccacatgacacaaaggaagagaactctagagatgtggaggaattgtcctca
gttacttcaaagacaaacagcagcactggcctggaagacagagatgaatttagcagcagt
gagggtacaggtgaaaagactgagccaaatgaagatgatggcaacatcaagtcacaggag
gatgatcagccaataattattaaaaggagaagaggaaggcctcgcaaataccctgcagaa
acagcctttaagtcaatagaagactccaaaacagagactgacattaccactgtagagcaa
tcttcacctagtggcaaactaaaagtcagtcaagcagatgagtccaataaagaaatagcc
aacctacaagaaaaaagtgcaagcaatgacgatagtgaagaaaaagcagcgagtgtgcat
ctgagaggaagaaagtccaaacgctcactgacttcatcagatgatgctgaatcctcagag
ccagaaagaaaacgccagaaatcgctgtctgaaacatcggaggacaaaaaagatgaggag
tctgatgaggaagaggaagaagaggaagaggaagaggaggaggaggaggaggagaaggag
gaggaggagcccttgggagccaccacaagatcagccaccagatcagaggcacagagaaag
aatcatagcaagccatctacacgtgcaacatccaaacttggcatcccagaaacaatttct
cctagaaatcgcctaaagttagcaaaagagaagttatctaccaacgaaaaagttagtaaa
tctcccccattaggaagatcaaaggcacagctctccccttctgtcaagcgcaagagagaa
gtcagccctcctggagctcgaacgagaggccagcagaaagtagatgaaaaccctctgaaa
aaggcaaagcggtaa
DBGET
integrated database retrieval system
