Mus pahari (shrew mouse): 110330386
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Entry
110330386 CDS
T05929
Symbol
Thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110330386 (Thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110330386 (Thoc5)
03041 Spliceosome [BR:
mpah03041
]
110330386 (Thoc5)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110330386 (Thoc5)
Spliceosome [BR:
mpah03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110330386 (Thoc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
110330386
NCBI-ProteinID:
XP_021066064
Ensembl:
MGP_PahariEiJ_G0016849
LinkDB
All DBs
Position
13:complement(24386094..24419779)
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AA seq
683 aa
AA seq
DB search
MSSESSKKRKPKVIRSDGTPTEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
ELQRLMAEIQDLKSKGSKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYSEAPPSISKAEITM
GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFLPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL
FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVLLDLKCKDSSVL
HLTFFYLMNLNIMTVKAKVTTAVELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY
QFDKVGILTLRDYVLELGHPYLWVQKLGGLHFPKEHPQQTVMADHSQSASHMETTMKLLK
TRVQSRLALHKQFASLEHGIVPVTSDCQDLFPAKVVSRLVKWVIIAHEEYMELHFTKDIV
EAGLAGDTNLYYLALIERGTAKLQAAVVLNPGYSSIPPVFRLCLNWKGEKTNSNDDNIRA
MESEVNVCYKELCGPRPSHQLLTNQLQRLCVLLDVYLETESHDDSFEGPKEFPQEKMCLR
LSRGPSRMKPFKYNHPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagaatctagcaaaaaacggaaacccaaagtgatccggagtgatggaacgcca
actgaagggaaacggaaccgatctgacacggagcaggaaggcaaatactacagtgaggaa
gcagaggttgacctgcgggaccctggcagagactatgagttgtacaagtatacctgccag
gagctacaaaggctgatggccgagatccaggacctgaagagcaagggcagcaaggacgtg
gccattgaaattgaagaacgaaggatccagagctgtgtgcacttcatgactctaaagaag
cttaaccgattagcccacatcaggttaaagaaaggaagagaccagacccacgaggccaag
cagaaagttgatgcctaccacctacagctacagaacctgctctacgaagtgatgcacctg
cagaaggagatcaccaaatgtctggagttcaagtcaaagcatgaagaaatcgatctggtc
agcttagaggaattttattcagaggctccaccaagcatcagcaaggccgagatcaccatg
ggagaccctcaccaacaaacgttggcacgtttggactgggagctggagcagcggaaaagg
ctggcagagaagtaccgagaatgcctgtccaacaaggagaagattctgaaggagattgag
gtgaagaaggagtatctgagcagcctccagcctcgcctcaacagcatcatgcaggcctcc
ctgcccgtgcaagagtacctgttcctgccgttcgaccaggcacacaagcagtacgagact
gccaggcacctgccgcctcccctctacgtgctcttcgtgcaggccactgcatatgggcag
gcctgtgataagacattgtccgtggcaatcgaaggcagtgtggacgaagccaaagctctt
ttcaagccccctgaggactcccaagatgatgagagcgactcagacgctgaagaggagcag
accacgaagcggcgtcggcccactctcggggttcagttggatgacaagcgcaaggagatg
ctgaaaaggcacccactgtctgtcctgctggatctgaagtgtaaagacagcagtgtgctt
catctgactttcttctatctcatgaacctcaacatcatgacagtgaaagccaaagtgacg
accgccgtggagctgatcacccccatcagtgcaggagacttactgtcccctgactcggtc
ttgagctgcttgtatccgggagatcatggaaaaaaaactcccaacccagccaatcagtat
cagtttgataaagttggcatcctgactttgagagactatgtacttgagttaggtcacccc
tacttgtgggtacagaagctgggtggcctccacttccccaaagagcatccccagcaaaca
gtgatggctgaccactcacagagcgccagccacatggagactaccatgaaactgctgaag
accagggtacagtcccgcctggctctacacaaacagtttgcatctctggaacatggcatt
gtgccagtcaccagcgattgccaggacctcttccctgccaaggtggtttctcgcctggta
aagtgggtgataattgcccatgaagagtacatggagctgcacttcactaaggacatcgta
gaggcaggactggctggagacaccaacctctactacctggcgcttattgaaaggggaaca
gctaaacttcaggctgctgtggtactgaaccctggctactcctccatcccaccagttttc
cggctctgtctaaactggaaaggggaaaaaaccaacagcaacgatgacaatattcgggct
atggagagtgaagtcaacgtgtgctataaggagctgtgtggccctcggcccagtcaccag
ctcctgaccaaccagctgcagagactgtgtgtgctgctggacgtctacctggagaccgag
agccatgatgacagcttcgagggccccaaggagtttccccaggagaagatgtgcctgcgg
ctttctaggggtccgagtaggatgaagccgtttaaatataaccatcctcagggattcttc
agccaccgctga
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integrated database retrieval system
