Mus pahari (shrew mouse): 110330433
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Entry
110330433 CDS
T05929
Symbol
Limch1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mpah04990
]
110330433 (Limch1)
Domain-containing proteins not elsewhere classified [BR:
mpah04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
110330433 (Limch1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Clathrin_lg_ch
Motif
Other DBs
NCBI-GeneID:
110330433
NCBI-ProteinID:
XP_021066170
Ensembl:
MGP_PahariEiJ_G0017044
LinkDB
All DBs
Position
13:57743782..58059615
Genome browser
AA seq
1087 aa
AA seq
DB search
MACPALGLEVLQPLQPEPPPEPAFAEAQKWIEQVTGRSFGDKDFRTGLENGILLCELLNA
IKPGLVKKINRLPTPIAGLDNTILFLRGCKELGLKESQLFDPSDLQDTSNRVTVKNLDYS
RKLKNVLVTIYWLGKAANSCTSYGGTTLNLKEFEGLLAQMRKETDDIESPKRSIRDSGYI
DCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSRQTPSPDVVLRGSSDGRGSDSESDLPHR
KLPDVKKDDMSARRTSHGEPKSAVPFNQYLPNKSNQTAYVPAPLRKKKAEREEFRKSWST
ATSPLGGDRPFRYGPRTPVSDDAESTSMFDMRCEEEAAVLPHSRARQEQLQLINNQLREE
DDKWQDDLARWKSRRRSASQDLIKKEEERKKMEKLMSGEDGTSERRKSIKTYREIVQEKE
RRERELHEAYKNARSQEEAEGILQQYIERFTISEAVLERLEMPKILERSHSTEPNVSSFP
NDPSPMKYLRQQSLPPPKFTATVETTIAHTSVPESIAAAGTGSPSKTITPNTVPMLTPRP
YSQPKNSQEVLKTFKVDGKVSMNGEMAPGDEEGKEKEGPAAAAPGPSLTKSQMFEGVATV
HGSPVQVKRGSNSIEINIKKPNSTPQEPTAASEGTESNGQEDEDGEEGPGPGDLEPDSAE
PQHFTTTVTRCSPTVALVEFSSNPQPKNEVPEQDQKKPENEMSGKVELVLSQKVAKPKSP
EPEATLTFPFLDQMPETNQLHLPNPSSQADSPSSEKSPGSTPFKFWAWDPEEERRRQEKW
QQEQERMLQERYQKEQDKLKEEWEKAQKEVEEEERRYYEEERKIIEDTVVPFTISSSSAD
QLSTSLSITEGSGTRNKMDLENCQDKENERRPKMPFQENDSDSLLKAREGGPPEEESSLT
PSPSANPENSVSKRIHQDPQLEAEAGASHCGTNPQPAQDPPWNQQIPNPPTSTSEDVKPK
TLALEKTVNHQMESPGERRKKNPRENFRAGPLSPCPPTPPGQSPNRYTRSISGKKLCSSC
GLVLGKGAAMIIETLNLYFHIQCFRCGICKGQLGDAVSGTDVRIRNGLLNCTDCYMRSRS
AGQPTTL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggcttgccccgctctcggtctggaagtccttcaacccctgcagcccgaaccacctccg
gagcctgccttcgccgaggcacagaagtggatcgagcaagtcactggtcgaagttttggt
gacaaagacttccggacaggactagaaaatggaattcttctttgcgagttgctgaatgct
ataaagccaggacttgttaaaaagatcaatagattgcctacccccattgcaggattggac
aataccatcttattcttgagaggctgtaaggagcttggccttaaagaatctcaactcttt
gacccgagtgaccttcaggatacctccaacagggtcactgtcaagaacctcgattatagc
aggaaactgaaaaacgtgttagtgaccatttactggctggggaaagctgcaaacagctgc
acatcctacggtggaaccacactgaacctgaaggagtttgaagggctgttggctcagatg
cgaaaggagactgacgacatcgagagcccgaagcgcagcatccgagacagtggctacatc
gactgctgggactctgaacgcagcgactccctctctcctcctcgccacggacgggatgac
tcctttgacagtctggactcttttggctcccgctccaggcagacaccttcaccggatgta
gttctcaggggaagcagtgatggaagaggaagcgattctgaatcagacttgccgcaccgg
aagttgccagatgtgaagaaagatgatatgtccgcacgaaggacttctcatggtgagccg
aaatcagcagtgccttttaaccagtacctcccgaacaaaagcaaccagacggcctatgtc
ccggcacctctgagaaagaagaaggcagagcgggaggaattcaggaagagctggagcacc
gccacctcgcccctgggaggggacaggcccttcagatacggccccagaactcctgtgtca
gatgacgcagagagcacgagtatgtttgacatgcggtgtgaggaggaggcagcggtgctg
ccgcacagcagggcccgccaggagcagctgcagctgataaataaccagctgagggaagag
gacgacaaatggcaagatgacctggctcgctggaagagccggagaagaagtgcttcacag
gacttgatcaagaaagaggaagaaaggaaaaaaatggagaagttgatgtctggagaagat
gggacaagtgaacggaggaaaagcatcaaaacttacagagaaatcgtccaagaaaaagag
cggagagagagggagcttcacgaggcatacaagaacgcaaggtcgcaggaggaggccgag
gggatcctccagcagtacatcgagagattcaccatcagtgaggctgtcctcgaacgctta
gagatgccaaaaatcctggaaagaagccattcaacagagccaaacgtgtcctccttcccg
aacgaccccagccccatgaagtacctgcggcagcagtcactgcccccgcccaagttcact
gccacggttgagaccaccatcgctcacaccagtgtcccagagagcattgcagcagcaggc
accgggtctccaagcaagaccatcactccaaacacagtgcctatgttgacacccaggcct
tactcacagcccaaaaactcgcaagaggttctgaagacttttaaggtagatgggaaggtc
agcatgaatggggaaatggcccctggagatgaggaaggaaaggaaaaagaaggccccgca
gcggcggcccctggcccttccttaaccaagtcccagatgtttgaaggtgtggccacggtg
cacggctctcctgtgcaggtgaaacgaggcagcaacagcatcgagatcaacatcaagaag
ccaaactccactccccaggaaccaacagcagcctctgagggaactgaatcgaacggccaa
gaagatgaagacggtgaagaggggccagggccaggggatttggagcctgactccgcagag
ccccagcacttcacgaccaccgtgactcggtgcagcccaacggtggccttggtggagttt
tcgtccaacccgcagccgaagaatgaggtgccagaacaagaccagaagaagccagaaaac
gagatgagtgggaaggtggagttagtgttgtcacagaaggtggcaaagccaaaatcccca
gagccagaagcaaccctgacgtttccatttctcgaccaaatgcctgaaaccaaccaacta
catttgccaaatcccagttctcaagcggattctccaagcagcgaaaagtcccctgggagc
acaccttttaagttctgggcatgggacccagaagaggagcgccggcgacaggagaaatgg
cagcaggagcaggaacgaatgctgcaggagaggtatcagaaggagcaagacaagctgaag
gaggagtgggaaaaggcccagaaggaggttgaagaagaagaacgcagatactacgaggag
gagcgtaagataattgaagacaccgtggttcccttcactatttcctcaagctctgcagac
caactgtctacatccttgtctataactgaaggcagcgggacaaggaataagatggacttg
gaaaactgccaagacaaagaaaacgagagaagaccgaagatgcctttccaggagaatgac
agcgactcattgctcaaagctagagaaggtggtccgccagaggaggagagcagcctaact
ccaagtccctccgctaaccctgaaaactccgtgtcaaaaagaatccatcaggacccgcag
ctggaggcagaggctggggcctcacactgtggtacaaacccacagccagctcaggatcca
ccttggaatcaacagataccaaacccaccaacatccacgtcggaagatgtgaagcccaaa
actctggccctggagaaaactgtcaatcatcagatggagtctccgggggaaaggcggaag
aaaaaccctcgagagaacttccgggctgggcccctgtccccgtgccctcccacccctccc
ggacagtctccaaacaggtacacgaggtctataagcgggaagaagctgtgctcctcctgt
gggctcgttttgggtaaaggcgccgcgatgatcatcgagaccctgaatctctactttcac
attcagtgtttcaggtgcggcatctgtaaaggacagcttggagacgcagtgagcgggaca
gacgtcaggattcgcaatggtctcctaaactgtaccgactgctacatgcgatccagaagt
gccggccagcctacaacactgtga
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