KEGG   Mus pahari (shrew mouse): 110330492
Entry
110330492         CDS       T05929                                 
Symbol
Nup54
Name
(RefSeq) nucleoporin p54 isoform X1
  KO
K14308  nuclear pore complex protein Nup54
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah03013  Nucleocytoplasmic transport
mpah05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110330492 (Nup54)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    110330492 (Nup54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpah03019]
    110330492 (Nup54)
Messenger RNA biogenesis [BR:mpah03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     110330492 (Nup54)
SSDB
Motif
Pfam: Nup54 Nup54_C XhlA
Other DBs
NCBI-GeneID: 110330492
NCBI-ProteinID: XP_021066281
Ensembl: MGP_PahariEiJ_G0017195
LinkDB
Position
13:complement(81003796..81023059)
AA seq 510 aa
MAFNFGAPSGTSGTSTATAAPAGGFGGFGTTTTTAGSAFSFSAPTNTGSTGLLGGTQNKG
FGFGTGFGTTTGTGTGLGTGLGTGLGFGGFNTQQQQQQQQTSLGGLFSQPTQAPAQSNQL
INTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVG
YSCMPNNKDEDGLVVLIFNKKETDIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQ
TEVVIYVVERSPNGTSRRVPATTLYAHFEQANIKTQLQQLGVTLSMTRTELSPAQIKQLL
QNPPAGVDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISED
ISELQKNQTTTMAKIAQYKRKLMELSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTI
QGELNAPTQFKGRLNELMSQIRMQNHFGAVKSEEKYYIDADLLREIKQHLKQQQEGLSHL
ISIIKDDLEDIKLVEHGLNETIHSRGGVFS
NT seq 1533 nt   +upstreamnt  +downstreamnt
atggctttcaattttggggctccttcgggcacttcgggcacctctacagccaccgcggca
ccggcgggtgggtttggaggatttggaacaacaactacaactgcaggctctgccttcagc
ttttcagccccgacaaacacaggcagtacaggccttctcggtggcactcagaacaaaggt
tttggctttggtactggttttggcacaacgacaggaactggcactggtttaggcactggt
ttgggaactggacttggattcggaggatttaatacccagcagcagcagcagcagcagcag
acttctttaggtggcctcttcagtcagcctacacaggctcctgcacagtccaaccagctc
atcaacactgccagcgcactttctgctccaacgctattgggggatgagagagacgccatc
ttggcaaagtggaaccagttgcaggccttctggggaacaggaaaaggatatttcaataat
aacattcctccagtggagtttacacaggaaaatcccttttgccgatttaaggctgtaggc
tatagttgtatgcccaataataaagatgaagatggactagtagttttaattttcaacaaa
aaagaaacagatattagaagccaacaacagcagttggtagaatcattgcataaagttttg
ggaggaaaccagacccttactgtcaatgtggagggcattaagactttgcccgatgatcag
acggaagttgtcatttatgttgttgagcgttctccaaatggcacctcaagaagagttcca
gcaacaacactttatgcccactttgagcaagccaacattaaaacccagctgcagcagctt
ggggtgaccctttctatgaccaggaccgagctgtcccccgctcagatcaagcaactccta
caaaaccctcctgcaggtgttgatcctattatttgggaacaggccaaggtggataaccca
gactctgaaaagttaattcctgtgccaatggtgggttttaaagaattgcttcgaagactg
aaggttcaagatcagatgactaagcagcatcagaccagactagatatcatatctgaagat
attagtgaactgcaaaagaatcaaactacaactatggccaaaatagcccaatacaagagg
aaactgatggagctctcccacaggaccttacaggtcctaatcaaacaggaaatccaaagg
aagagtggctatgcgatccaggctgatgaagaacagttgcgagttcagctggatactatt
caaggggaactgaatgcacccactcagttcaaaggtcggctgaatgaactgatgtcccag
atcaggatgcagaatcattttggagctgtgaaatctgaagaaaagtactacatagatgca
gacctgttacgagaaatcaagcagcatttgaagcaacaacaggaaggccttagccacttg
attagcatcataaaagatgacctagaagacataaaactggtagagcatggattgaatgag
accatccatagcagaggcggtgtctttagctga

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