Mus pahari (shrew mouse): 110330492
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Entry
110330492 CDS
T05929
Symbol
Nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03013
Nucleocytoplasmic transport
mpah05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110330492 (Nup54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110330492 (Nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110330492 (Nup54)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110330492 (Nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
110330492
NCBI-ProteinID:
XP_021066281
Ensembl:
MGP_PahariEiJ_G0017195
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All DBs
Position
13:complement(81003796..81023059)
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AA seq
510 aa
AA seq
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MAFNFGAPSGTSGTSTATAAPAGGFGGFGTTTTTAGSAFSFSAPTNTGSTGLLGGTQNKG
FGFGTGFGTTTGTGTGLGTGLGTGLGFGGFNTQQQQQQQQTSLGGLFSQPTQAPAQSNQL
INTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVG
YSCMPNNKDEDGLVVLIFNKKETDIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQ
TEVVIYVVERSPNGTSRRVPATTLYAHFEQANIKTQLQQLGVTLSMTRTELSPAQIKQLL
QNPPAGVDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISED
ISELQKNQTTTMAKIAQYKRKLMELSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTI
QGELNAPTQFKGRLNELMSQIRMQNHFGAVKSEEKYYIDADLLREIKQHLKQQQEGLSHL
ISIIKDDLEDIKLVEHGLNETIHSRGGVFS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaattttggggctccttcgggcacttcgggcacctctacagccaccgcggca
ccggcgggtgggtttggaggatttggaacaacaactacaactgcaggctctgccttcagc
ttttcagccccgacaaacacaggcagtacaggccttctcggtggcactcagaacaaaggt
tttggctttggtactggttttggcacaacgacaggaactggcactggtttaggcactggt
ttgggaactggacttggattcggaggatttaatacccagcagcagcagcagcagcagcag
acttctttaggtggcctcttcagtcagcctacacaggctcctgcacagtccaaccagctc
atcaacactgccagcgcactttctgctccaacgctattgggggatgagagagacgccatc
ttggcaaagtggaaccagttgcaggccttctggggaacaggaaaaggatatttcaataat
aacattcctccagtggagtttacacaggaaaatcccttttgccgatttaaggctgtaggc
tatagttgtatgcccaataataaagatgaagatggactagtagttttaattttcaacaaa
aaagaaacagatattagaagccaacaacagcagttggtagaatcattgcataaagttttg
ggaggaaaccagacccttactgtcaatgtggagggcattaagactttgcccgatgatcag
acggaagttgtcatttatgttgttgagcgttctccaaatggcacctcaagaagagttcca
gcaacaacactttatgcccactttgagcaagccaacattaaaacccagctgcagcagctt
ggggtgaccctttctatgaccaggaccgagctgtcccccgctcagatcaagcaactccta
caaaaccctcctgcaggtgttgatcctattatttgggaacaggccaaggtggataaccca
gactctgaaaagttaattcctgtgccaatggtgggttttaaagaattgcttcgaagactg
aaggttcaagatcagatgactaagcagcatcagaccagactagatatcatatctgaagat
attagtgaactgcaaaagaatcaaactacaactatggccaaaatagcccaatacaagagg
aaactgatggagctctcccacaggaccttacaggtcctaatcaaacaggaaatccaaagg
aagagtggctatgcgatccaggctgatgaagaacagttgcgagttcagctggatactatt
caaggggaactgaatgcacccactcagttcaaaggtcggctgaatgaactgatgtcccag
atcaggatgcagaatcattttggagctgtgaaatctgaagaaaagtactacatagatgca
gacctgttacgagaaatcaagcagcatttgaagcaacaacaggaaggccttagccacttg
attagcatcataaaagatgacctagaagacataaaactggtagagcatggattgaatgag
accatccatagcagaggcggtgtctttagctga
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