KEGG   Mus pahari (shrew mouse): 110330502
Entry
110330502         CDS       T05929                                 
Symbol
Otx1
Name
(RefSeq) homeobox protein OTX1 isoform X1
  KO
K09326  homeobox protein OTX1
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    110330502 (Otx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mpah03000]
    110330502 (Otx1)
Transcription factors [BR:mpah03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain Paired-related
    110330502 (Otx1)
SSDB
Motif
Pfam: TF_Otx Homeodomain Homeobox_KN SatD
Other DBs
NCBI-GeneID: 110330502
NCBI-ProteinID: XP_021066300
Ensembl: MGP_PahariEiJ_G0016764
LinkDB
Position
13:8651795..8656712
AA seq 355 aa
MMSYLKQPPYGMNGLGLAGPAMDLLHPSVGYPATPRKQRRERTTFTRSQLDVLEALFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSGNGTKSRPVKKKSSPVRESSG
SESSGQFTPPAVSSSASSSSSASSASANPGAAAAAGLGGNPVAAASSLSTPTASSIWSPA
SISPGSAPTSVSVPEPLAAPSNASCMQRSVAAGAATAAASYPMSYGQGGSYGQGYPAPSS
SYFGGVDCSSYLAPMHSHHHPHQLSPMAPSSMAGHHHHHPHAHHPLSQSSGHHHHHHHHH
HHQGYGGSGLAFNSADCLDYKEPAAAAASSAWKLNFNSPDCLDYKDQASWRFQVL
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgatgtcttacctcaaacaacccccatacggcatgaacgggctgggcctagctggccct
gccatggacctcctgcacccctccgtgggctaccctgccaccccgcggaagcagcgacgg
gagcgcaccaccttcacgcgctcacagctggacgtgctcgaggcgctgttcgcaaagact
cgctacccagacatcttcatgcgcgaggaggtggcgctcaagatcaacctgccagagtcc
agagtccaggtttggttcaagaaccgccgcgccaagtgccgccagcagcagcagagcggg
aatggaacgaaaagcaggcccgtcaaaaagaagtcgtctccagtgcgcgagagctcgggt
tcagagagcagcggccagttcacgccgcccgcggtatctagctctgcttcttcgtctagc
tcagcatccagtgcctccgccaaccccggggctgctgcggccgcgggcctgggtgggaac
ccggtggcagcagcgtcctctctgagcacgcctactgcttcgtccatctggagcccggcc
tccatctcgccgggctcagcgccgacatccgtatcggtgccagagccactggccgctccg
agcaacgcctcgtgcatgcagcgctcggtagccgcaggtgcggccactgccgcagcctcc
taccctatgtcctatggccagggcggaagctatggtcagggctaccccgcgccctcctct
tcttactttggtggtgtagactgcagctcctacctagcgcccatgcactctcatcaccac
ccgcaccagcttagccccatggcaccctcctccatggctggccatcaccaccaccacccg
cacgcgcaccacccactgagccaatcttcaggccaccaccaccaccatcaccaccaccac
caccaccaaggttatggaggctctgggcttgccttcaattctgccgattgcttggattac
aaggagcccgccgccgctgctgcttcctctgcctggaaactcaacttcaactctcccgac
tgtctggactataaggaccaagcctcgtggcggttccaggtcttgtga

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