Mus pahari (shrew mouse): 110330502
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Entry
110330502 CDS
T05929
Symbol
Otx1
Name
(RefSeq) homeobox protein OTX1 isoform X1
KO
K09326
homeobox protein OTX1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
110330502 (Otx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110330502 (Otx1)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
110330502 (Otx1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
110330502
NCBI-ProteinID:
XP_021066300
Ensembl:
MGP_PahariEiJ_G0016764
LinkDB
All DBs
Position
13:8651795..8656712
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AA seq
355 aa
AA seq
DB search
MMSYLKQPPYGMNGLGLAGPAMDLLHPSVGYPATPRKQRRERTTFTRSQLDVLEALFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSGNGTKSRPVKKKSSPVRESSG
SESSGQFTPPAVSSSASSSSSASSASANPGAAAAAGLGGNPVAAASSLSTPTASSIWSPA
SISPGSAPTSVSVPEPLAAPSNASCMQRSVAAGAATAAASYPMSYGQGGSYGQGYPAPSS
SYFGGVDCSSYLAPMHSHHHPHQLSPMAPSSMAGHHHHHPHAHHPLSQSSGHHHHHHHHH
HHQGYGGSGLAFNSADCLDYKEPAAAAASSAWKLNFNSPDCLDYKDQASWRFQVL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttacctcaaacaacccccatacggcatgaacgggctgggcctagctggccct
gccatggacctcctgcacccctccgtgggctaccctgccaccccgcggaagcagcgacgg
gagcgcaccaccttcacgcgctcacagctggacgtgctcgaggcgctgttcgcaaagact
cgctacccagacatcttcatgcgcgaggaggtggcgctcaagatcaacctgccagagtcc
agagtccaggtttggttcaagaaccgccgcgccaagtgccgccagcagcagcagagcggg
aatggaacgaaaagcaggcccgtcaaaaagaagtcgtctccagtgcgcgagagctcgggt
tcagagagcagcggccagttcacgccgcccgcggtatctagctctgcttcttcgtctagc
tcagcatccagtgcctccgccaaccccggggctgctgcggccgcgggcctgggtgggaac
ccggtggcagcagcgtcctctctgagcacgcctactgcttcgtccatctggagcccggcc
tccatctcgccgggctcagcgccgacatccgtatcggtgccagagccactggccgctccg
agcaacgcctcgtgcatgcagcgctcggtagccgcaggtgcggccactgccgcagcctcc
taccctatgtcctatggccagggcggaagctatggtcagggctaccccgcgccctcctct
tcttactttggtggtgtagactgcagctcctacctagcgcccatgcactctcatcaccac
ccgcaccagcttagccccatggcaccctcctccatggctggccatcaccaccaccacccg
cacgcgcaccacccactgagccaatcttcaggccaccaccaccaccatcaccaccaccac
caccaccaaggttatggaggctctgggcttgccttcaattctgccgattgcttggattac
aaggagcccgccgccgctgctgcttcctctgcctggaaactcaacttcaactctcccgac
tgtctggactataaggaccaagcctcgtggcggttccaggtcttgtga
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