KEGG   Mus pahari (shrew mouse): 110330515
Entry
110330515         CDS       T05929                                 
Symbol
Sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110330515 (Sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mpah03041]
    110330515 (Sf3a1)
Spliceosome [BR:mpah03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    110330515 (Sf3a1)
 Complex B
    110330515 (Sf3a1)
 Complex C
   U2 SnRNP specific factors
    110330515 (Sf3a1)
SSDB
Motif
Pfam: Surp PRP21_like_P ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 110330515
NCBI-ProteinID: XP_021066318
Ensembl: MGP_PahariEiJ_G0016862
LinkDB
Position
13:complement(25121978..25142040)
AA seq 791 aa
MQAGPVQAVPPPPPVATESKQPIEEEASSKEDPTPSKPVVGIIYPPPEVRNIVDKTASFV
ARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQ
QQATQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQ
FLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLFAKLKKEAENPREVL
DQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTT
PEELGARILIQERYEKFGESEEVEMEVESDEEDQGKAEETPSQLDQDTQVQDMDEGSDDE
EEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKIPA
SKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVEET
AIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDTK
EKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPAMPPPVRTTVVSAVPVMPRPPM
ASVVRLPPGSVIAPMPPIIHAPRINVVPMPPAAPPIMAPRPPPMIVPTAFVPAPPVAPVP
APAPMPPVHPPPPMEDEPPSKKLKTEDSLMPEEEFLRRNKGPVSIKVQVPNMQDKTEWKL
NGQGLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMASGAVIH
LALKERGGRKK
NT seq 2376 nt   +upstreamnt  +downstreamnt
atgcaggccggacccgtgcaggcggtacccccgccgccgccagttgccactgagtccaaa
cagccaattgaagaagaagcatcatcgaaggaggatcccaccccttccaagccagtggtt
ggcattatttacccccctccggaggtcaggaacatcgtcgacaagactgccagttttgtg
gccagaaatgggcctgaatttgaagctaggattcgacagaatgagatcaacaaccccaag
ttcaatttcttaaatcccaatgatccttaccatgcctactaccgccacaaggtcagcgag
ttcaaggagggaaaggctcaggaaccctcagctgctattcccaaggttatgcagcagcag
cagcaagccacacagcagcagctgccccagaaggtccaggcccaggtgatccaagagacc
atagtaccgaaggagccccctcctgagtttgagttcatcgctgatcctccctccatctca
gccttcgacctggatgtggtgaagctgacagctcagtttgtggccaggaatgggcgtcag
tttctgacccagctgatgcagaaagagcagcgcaactaccagtttgatttcctccgaccc
cagcacagcctcttcaactacttcacaaagctggtggagcagtataccaagatcctgatt
ccacccaaaggcttatttgcaaagctcaagaaagaggctgaaaatccccgagaagttttg
gaccaggtttgttaccgagtagaatgggccaaatttcaggagcgtgaaaggaagaaagaa
gaagaagagaaagagaaggaacgcgtagcctatgctcagattgattggcatgactttgtg
gtggtggagacagtggattttcaacccaatgagcaaggaaactttccacccccaacaaca
ccagaggaactgggagctcggatcctcattcaggagcgctacgagaagttcggggagagt
gaggaagtggagatggaggttgagtcagatgaggaagatcaggggaaggctgaggagact
ccttcccagctggaccaggatactcaagtacaggacatggatgagggttcagacgatgaa
gaagaagggcagaaagtgcctccacccccagagacacccatgcctccacctctgccccca
acaccagaccaagtcattgtgcgaaaggactatgatcccaaagcttccaagccccttcct
ccagcccctgctcccgatgagtatcttgtatcccccatcactggggagaagattcctgcc
agcaaaatgcaagagcacatgcgcattgggcttcttgacccccgctggctggagcagcgg
gaccgctccatccgagagaagcagagtgatgatgaggtttatgcaccaggtctggatatt
gagagcagcttaaagcagttggctgagcgacgtactgacatctttggggtagaagagaca
gccattggtaagaagattggtgaagaggagatccagaagccagaggagaaggtgacttgg
gatggccattcaggcagcatggcccggacccagcaggctgcccaggccaacatcaccctc
caggagcagattgaggccatccataaagccaagggcctggtgccagaagatgacactaag
gagaagattggccctagcaagcccaatgaaatccctcagcagccaccacctccatcttca
gccaccaatatccccagctcagcaccccccattacatcagtgccccggccacctgcgatg
ccacctccagtccgtaccactgttgtatctgcagtacctgtcatgcctcgcccacccatg
gcatctgtggtcaggctgcccccaggctcagtaattgcccctatgccacctatcatccac
gcacccaggatcaacgtggtacctatgcctcctgcagcacctcccatcatggcgccccgc
ccacctcccatgattgtgccaacagccttcgtgcctgccccacctgtggctccagtccca
gccccagctccaatgcctcctgtacaccccccacctcctatggaggatgagccgccatcc
aagaaactaaagaccgaggacagtctcatgcctgaggaagagttcctgcgcaggaacaag
ggtccagtatccatcaaagtgcaggtacccaacatgcaggataagacggaatggaagctg
aatggtcaggggctggtcttcactctcccactcacagaccaggtctctgtcatcaaagtg
aagattcatgaagccacgggcatgcctgcggggaaacagaaactacagtatgaaggcatc
ttcatcaaggattccaactccctggcttactacaacatggccagtggtgctgtcatccac
ttggccctcaaggagagaggcggcagaaagaagtag

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