Mus pahari (shrew mouse): 110330526
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Entry
110330526 CDS
T05929
Symbol
Slit2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04360
Axon guidance
mpah04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110330526 (Slit2)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
110330526 (Slit2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mpah00536
]
110330526 (Slit2)
Glycosaminoglycan binding proteins [BR:
mpah00536
]
Heparan sulfate / Heparin
Axon guidance molecules
110330526 (Slit2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRRCT
LRR_9
LRR_1
hEGF
LRR_14
EGF_TEN
EGF_DL_JAG
JAG1-like_EGF2
EGF_TGFA-like
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
110330526
NCBI-ProteinID:
XP_021066338
Ensembl:
MGP_PahariEiJ_G0016990
LinkDB
All DBs
Position
13:40336171..40674403
Genome browser
AA seq
1542 aa
AA seq
DB search
MSGIGWQTLSLSLGLVLSILNKVAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERL
DLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLFPE
LLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVL
TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS
HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPT
NLPETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLY
GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTF
SALRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF
RCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQRLNKIPDHIPQYTA
ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLEN
VQHKMFKGLESLKTLMLRSNRINCVGNDSFIGLGSVRLLSLYDNQITTVAPGAFDTLHSL
STLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGN
DDNSCSPLSRCPSECTCLDSVVRCSNKGLKVLPKGIPKDVTELYLDGNQFTLVPKELSNY
KHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGND
ISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKL
LLTTPSKKFTCQGSVDITIQAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDV
PIHACISNPCKHGGTCHLKEGENDGFWCICADGFEGENCEVNIDDCEDNDCENNSTCVDG
INNYTCLCPPEYTAANLNEVEKGELCEEKLDFCAQDLNPCQHDSKCILTPKGFKCDCTPG
YIGEHCDIDFDDCQDNKCKNGAHCTDAVNGYTCVCPEGYSGLFCEFSPPMVLPRTSPCDN
FDCQNGAQCIIRINEPICQCLPGYLGEKCEKLVSVNFVNKESYLQIPSAKVRPQTNITLQ
IATDEDSGILLYKGDKDHIAVELYRGRVRASYDTGSHPASAIYSVETINDGHFHIVELLT
LDSSLSLSVDGGSPKVITNLSKQSTLNFDSPLYVGGMPGKNNVASLRQAPGQNGTSFHGC
IRNLYINSELQDFRKVPMQTGILPGCEPCHKKVCAHGTCQPSSQSGFTCECEEGWMGPLC
DQRTNDPCLGNKCVHGTCLPINAFSYSCKCLEGHGGVLCDEEEDLFNPCQMIKCKHGKCR
LSGVSQPYCECNSGFTGDSCDREISCRGERIRDYYQKQQGYAACQTTKKVSRLECRGGCA
GGQCCGPLRSKRRKYSFECTDGSSFVDEVEKVVKCGCARCTS
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcattggctggcagacactgtccctatcgctggggttagtgttgtcgatctta
aacaaggtggcgccgcaggcgtgcccggcccagtgctcctgttcaggcagcacagtggac
tgtcatgggctggcactgcgcagtgtgcccaggaatatcccccgcaacaccgagagactg
gatttgaatggaaataacatcacgaggatcacgaagacagattttgctggtctcaggcac
ctcagagttcttcagctcatggaaaacaagatcagcaccatcgagaggggagcattccag
gatcttaaggagctggaaagactgcgcttaaacagaaataaccttcagttgtttcctgag
ctgctgtttctcgggactgcgaagctctaccggcttgatctcagtgaaaatcaaattcaa
gcaattccaaggaaggctttccgtggggcagttgacattaaaaatctgcaactggattac
aaccagatcagctgcattgaagatggggcgttcagagctctacgagatctggaagtgctc
actctgaacaataacaatattactagactttcagtggcaagtttcaaccatatgcctaaa
cttaggacatttcgactccactcgaacaacctgtactgcgactgtcacctagcctggctc
tcggactggcttcgccaaaggccacgggtgggcttgtacactcagtgtatgggcccatcc
cacctgaggggccacaatgtagcagaggttcaaaaacgagagtttgtctgcagtgatgag
gaagaaggtcaccagtcattcatggctccctcctgtagtgtgctgcactgccccgctgct
tgtacctgtagcaacaacattgttgactgccgagggaaaggcctcactgagatccccaca
aatctgccagagaccatcacagaaatacgtctggaacagaactccatcagggtcatccct
ccaggagccttctcaccatacaaaaagcttagacgactagacctgagcaataaccagatc
tctgaacttgcgccagatgccttccaaggactgcgatctctgaattcacttgtcctgtat
ggaaataaaatcacagaactcccaaaaagtttattcgaaggactattttccttgcagcta
ctattattgaatgccaacaagataaactgccttcgggtagatgcttttcaggacctgcac
aacctgaacctcctctccttatacgacaataagcttcagacggttgccaagggcaccttc
tcggccctcagagccatccaaactatgcatttggcccagaatcctttcatttgcgactgc
catctcaagtggctagcggattatctccacaccaacccaattgagaccagcggtgcccgt
tgcaccagcccccgccgcctggcgaacaaaagaattggacagatcaaaagcaagaaattc
cgttgttcagctaaagaacagtatttcattccaggtacagaagattatcgatcaaaatta
agtggagactgctttgcagacttggcttgtcctgagaagtgtcgctgcgaagggaccaca
gtagactgctccaatcaaagactcaacaaaatcccagatcatattccccagtatacagca
gagctgcgtctcaataataatgaattcacagtgttagaggccacgggaatatttaagaaa
cttcctcagttacgtaaaatcaactttagcaacaataagatcactgatatcgaggagggt
gcatttgaaggcgcgtctggtgtgaatgaaattcttctcaccagtaaccgtttggaaaat
gttcagcataagatgttcaaaggattggagagcctcaaaacattgatgctgagaagtaat
cgaataaactgcgttgggaacgacagtttcataggactcggctctgtgcgtctgctctct
ttatatgacaatcaaattaccacagttgcaccaggagcatttgatactctccattcatta
tccactctaaacctcttggccaatcctttcaactgtaactgtcacctggcatggctggga
gaatggctcagaaggaaaagaattgtaacaggaaatcctcgatgccaaaaaccctacttc
ctgaaggaaattccaatccaggatgtagccattcaggacttcacctgtgatgatggaaat
gatgacaatagttgctctccactctcccgctgtccttctgaatgtacctgcttggattca
gtggtacgatgtagcaacaagggcttgaaggtcttgcctaaaggcattccaaaagatgtc
acagagctgtatctggatgggaaccagtttacactggtcccgaaggaactctctaactac
aaacatttaacacttatagacttaagtaacaaccgaataagcaccctttccaatcaaagc
ttcagcaacatgacccagcttctcaccttaatcctcagttacaaccgtctgagatgtatc
cctccacgaacctttgatggattgaagtctcttcggttactgtctctacatggaaatgac
atttctgtcgtgcctgaaggtgccttcaatgacttgtcagccttgtcacacttagcgatt
ggagccaaccctctttactgtgattgtaacatgcagtggttatccgactgggtgaagtcg
gaatataaagaacctggaattgcacgctgtgccggccctggagaaatggcagataaatta
ttactcacaactccctccaaaaaatttacatgtcaaggttccgtggatatcactattcaa
gccaagtgtaatccctgcttatcaaatccatgtaaaaatgatggcacctgtaacaatgac
ccagttgatttttatcgatgtacctgcccgtatggtttcaagggtcaggactgtgatgtc
cccattcatgcctgtatcagtaatccttgtaaacatggaggaacttgtcacttaaaggaa
ggagagaatgatggattctggtgcatttgtgctgatgggtttgaaggagaaaactgtgaa
gtcaatattgatgattgtgaagataatgattgtgaaaataattctacatgcgttgatgga
attaacaactacacatgtctttgtccaccagaatacacagctgctaatctgaatgaggtg
gaaaaaggtgaactgtgtgaggaaaagctggacttctgtgcacaagacctaaacccctgc
cagcacgactccaagtgcatcctgactccaaagggattcaagtgtgactgcactccggga
tacattggcgagcactgtgacattgactttgacgactgccaagataacaagtgtaaaaac
ggtgctcactgcacagacgcagtgaatggatacacgtgtgtctgtcctgaaggctacagt
ggcttgttctgtgagttttccccacctatggtccttccacgcaccagcccctgtgataat
tttgactgccagaatggagcccagtgtatcatcaggataaatgaaccaatatgtcagtgt
ttgcctggctacctgggagagaagtgtgagaagttggtcagtgtgaattttgtaaacaaa
gagtcctaccttcagattccttcagccaaggttcggcctcagacaaacatcacacttcag
attgccacagatgaagacagcggcatcctcttgtataaaggtgacaaagaccacattgct
gtggaactctatcgagggcgagttcgagccagctatgacaccggctctcatccggcttct
gccatttacagtgtggagacaatcaatgatggacacttccacattgtggagctactgacc
ctggattccagcctttccctctctgtggatggaggaagccctaaagtcatcaccaatttg
tcaaaacaatctactctgaatttcgactctccactttatgtaggaggcatgcctgggaaa
aataatgtggcatccctgcgccaggcccctgggcaaaatggcaccagcttccatggctgt
atccggaacctttacattaacagtgagctgcaggacttccggaaagtgcctatgcaaacc
ggaattctgcctggctgtgaaccctgccacaagaaagtatgtgcccatggcacgtgccag
cccagcagccaatcaggcttcacctgtgaatgtgaggaagggtggatggggcccctctgt
gatcagagaaccaatgatccctgccttggaaacaaatgtgtgcatgggacctgcctgccc
atcaatgccttctcctatagttgtaagtgcctggagggccatggtggtgtcctctgtgat
gaagaagaagatctctttaacccctgccagatgatcaagtgcaagcatgggaagtgcagg
ctctctggagtcagccagccctattgtgaatgcaacagtggatttaccggggacagctgt
gatagagaaatttcttgtcgaggggaacggataagggattattaccagaaacagcagggt
tacgctgcctgtcaaacaactaagaaagtatctcgcttggaatgcagaggcgggtgtgct
ggaggccagtgctgtggacctctgagaagcaagaggcggaaatactctttcgaatgcaca
gatggctcctcctttgtggacgaggttgagaaagtggtgaagtgcggctgcgcgagatgt
acctcctaa
DBGET
integrated database retrieval system
