Mus pahari (shrew mouse): 110330543
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Entry
110330543 CDS
T05929
Symbol
Gabra4
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04080
Neuroactive ligand-receptor interaction
mpah04082
Neuroactive ligand signaling
mpah04723
Retrograde endocannabinoid signaling
mpah04727
GABAergic synapse
mpah04742
Taste transduction
mpah05032
Morphine addiction
mpah05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110330543 (Gabra4)
04082 Neuroactive ligand signaling
110330543 (Gabra4)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
110330543 (Gabra4)
04723 Retrograde endocannabinoid signaling
110330543 (Gabra4)
09157 Sensory system
04742 Taste transduction
110330543 (Gabra4)
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
110330543 (Gabra4)
05033 Nicotine addiction
110330543 (Gabra4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mpah04040
]
110330543 (Gabra4)
Ion channels [BR:
mpah04040
]
Ligand-gated channels
GABA-A
110330543 (Gabra4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
OAD_gamma
Motif
Other DBs
NCBI-GeneID:
110330543
NCBI-ProteinID:
XP_021066380
Ensembl:
MGP_PahariEiJ_G0017060
LinkDB
All DBs
Position
13:complement(62021242..62101369)
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AA seq
552 aa
AA seq
DB search
MVSVQKVPAIALCSGVSLALLHFLCLAACLNESPGQNSKDEKLCPENFTRILDSLLDGYD
NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEILRLN
NMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFP
MDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSIT
GEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNVQMQKAKKKTSKPPP
EVPAAPVLREKHTETSLQNTHANLNMRKRTNALVHSESDVNSRTEVGNHSSKTSAVQESS
EAISKAQLASSPNPFSRANAAETMSAAARGLSSATSPSPHGTLRPASLGSTSTRPAFGSR
LGRIKTTVNTTGVAGNVSATPPPPAPPPSGSGTSKIDKYARILFPVTFGAFNMVYWVVYL
SKDTMEKSESLM
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgtccagaaggtacccgcgatcgcgctgtgctccggggtcagcctcgccctc
ctgcacttcctgtgcctggcggcttgtttaaacgaatccccaggacagaactcaaaggac
gagaaattgtgcccggaaaattttacccgtatcctggacagtttgctggatggttatgac
aacaggctgcgtcctggatttgggggtcctgttacagaagtgaaaactgatatatatgtc
accagctttggacccgtttctgacgttgaaatggaatacactatggatgtgttcttcaga
cagacatggattgacaaaagactaaaatacgacggccccattgaaatcttgaggctgaac
aatatgatggtcaccaaagtttggacccctgacactttcttcaggaatggaaagaaatct
gtctcacataacatgacagccccaaataagctttttagaatcatgagaaatggcactatt
ttatacacaatgagactcaccataagtgcagagtgtcccatgagactggtggattttcct
atggatggtcatgcctgccctttgaaatttgggagttatgcatatcccaaaagtgagatg
atctatacctggaccaaaggccctgagaagtcagtggaggtgccaaaggagtcatctagc
ttagttcaatatgacctcattgggcagactgtatcaagcgagactatcaaatctattaca
ggtgaatacattgttatgacagtttacttccacctcagacggaagatgggctattttatg
attcagacatacatcccatgcatcatgacagtgattctttctcaagtttccttctggata
aacaaggagtctgttccagctagaactgtgtttggtataaccacagtcctcacaatgacc
acgctaagcatcagtgctcgccattctttgcccaaagtgtcctatgcgactgccatggat
tggttcatagctgtctgttttgcttttgtattttcggctcttattgagtttgctgctgtc
aactatttcaccaacgttcaaatgcaaaaagccaaaaagaagacatcaaagcctcctcca
gaagttccagccgctccagtgctgagggaaaaacacacagaaacatccctccagaataca
catgccaatttgaacatgaggaaaagaacaaatgccttggtccattcagaatcggatgtc
aacagcagaactgaggtgggaaatcactccagcaagaccagcgctgtccaggagtcttct
gaagccatttccaaggctcagttagcttccagtccaaatccattcagcagggcaaatgca
gctgagactatgtctgcagcagccagaggtctttcatctgcaacatccccctctcctcac
ggcacactgcggccagcttctttggggtcaacttctactcgccctgcatttggatctaga
ctcgggcgtattaagacaacagttaatacaacaggggtggctgggaatgtgtcagccaca
cctcctccccctgctccaccgccttctggatctggcacaagtaaaattgacaaatatgct
cgtattctctttccagtcacatttggggcatttaatatggtctactgggttgtttattta
tctaaggacaccatggagaaatcagaaagtctaatgtaa
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