Mus pahari (shrew mouse): 110330550
Help
Entry
110330550 CDS
T05929
Symbol
Msx1
Name
(RefSeq) homeobox protein MSX-1 isoform X1
KO
K09341
homeobox protein MSX
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah05166
Human T-cell leukemia virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
110330550 (Msx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110330550 (Msx1)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
110330550 (Msx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
110330550
NCBI-ProteinID:
XP_021066396
Ensembl:
MGP_PahariEiJ_G0016957
LinkDB
All DBs
Position
13:complement(31153603..31157545)
Genome browser
AA seq
306 aa
AA seq
DB search
MAPAAAMTSLPLGVKVEDSAFAKPAGGGAGQAPGAAAATATAMGTDEEGAKPKVPASLLP
FSVEALMADHRKPGAKESVLVASEGAQAAGGSVQHLGTRPGSLGAPDAPSSPRPLGHFSV
GGLLKLPEDALVKAESPEKLDRTPWMQSPRFSPPPASPLGRLSPPACTLRKHKTNRKPRT
PFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEAELEK
LKMAAKPMLPPAAFGLSFPLGGPAAVAAAAGASLYSASGPFQRAALPVAPVGLYTAHVGY
SMYHLT
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggccccggctgctgctatgacttctttgccactcggtgtcaaagtggaggactccgcc
ttcgccaagcctgctgggggaggcgctggccaggcccccggggctgctgcggccaccgca
accgccatgggcacagatgaggagggggctaagcccaaagtgcccgcttcactcctaccc
ttcagcgtggaggccctcatggccgatcacaggaaacccggggccaaggagagcgtcctt
gtggcctccgaaggggctcaggcagcgggtggctcggtgcagcacttgggcacccggccc
gggtctctgggcgccccggatgcgccctcctcgccgcggcctctcggccatttctcagtc
ggaggactcctcaagctgccagaagatgctctggtgaaggccgaaagccccgagaagctg
gatcggaccccgtggatgcagagtccccgcttctccccgcccccagccagccccctagga
cggctgagtcccccggcctgcaccctacgcaagcacaagactaaccgcaagcccaggacg
cctttcaccacggctcagctgctggctctggagcgcaagttccgccagaagcagtacctg
tctattgccgagcgcgccgagttctccagctcgctcagcctcaccgagacccaggtgaag
atctggttccagaaccgccgcgctaaagccaagagactgcaggaggcggagctggagaag
ctgaagatggccgctaagcccatgttgccgcctgctgccttcggcctctcctttcctctt
ggcggtcctgcagcggtggctgcagctgcgggcgcctcactctacagtgcctctggtcct
ttccagcgcgccgcgctgcctgtagcgccggtgggactctacaccgcccatgtagggtac
agcatgtaccacctgacttag
DBGET
integrated database retrieval system
