Mus pahari (shrew mouse): 110330659
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Entry
110330659 CDS
T05929
Symbol
Samd4b
Name
(RefSeq) protein Smaug homolog 2
KO
K27396
protein Smaug
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110330659 (Samd4b)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
110330659 (Samd4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
VBS
Motif
Other DBs
NCBI-GeneID:
110330659
NCBI-ProteinID:
XP_021066583
Ensembl:
MGP_PahariEiJ_G0012683
LinkDB
All DBs
Position
1:complement(1391789..1428712)
Genome browser
AA seq
687 aa
AA seq
DB search
MMFRDQVGILASWFKGWNECEQTVALLSLLKRVTRTQARFLQLCLEHSLADCNDIHLLES
EANSAAIVSQWQQESKEKVVSLLLSHLPLLQPGNTEAKSEYMRLLQKVLAYSIESNAFIE
ESRQLLSYALIHPATTLEDRNALALWLSHLEERLASGFRTRPEPSYHSRQGSDEWGGPAE
LAPGEAGPGWQDKPPRENGHVPFHPSSSVPPAINSIGSNANTGLPCQIHPSPLKRSMSLI
PTSPQAPGEWPSPEELGARAAFTTPDHAPLSPQSSVASSGSEQTEEQGSSRNTFQEDGSG
MKDVPSWLKSLRLHKYAALFSQMSYEEMMTLTEQHLESQNVTKGARHKIALSIQKLRERQ
SVLKSLEKDVLEGGNLRNALQELQQIIITPIKAYSVLQATPTAKDGGRGEPLLPGAEPPL
THPGSDKGTEAKDPPAAENYPPPPAPAPSDSSEPAPAPVADGDIPSQFTRVMGKVCTQLL
VSRPDEENITSYLQLIEKCLTHEAFTETQKKRLLSWKQQVLKLLRTFPRKAALDMQSYRQ
QKGWAFGSNSLPIAGSVGMGVARRTQRQFPMPPRALPPGRMGLLSPSGIGGVSPRHALTS
PSLGGQGRQNLWFANPGGSNSMPSQSRSSVQRTHSLPVHSSPQAILMFPPDCPVPGPDLE
INPTLESLCLSMTEHALGDGTDKTSTI
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgagaccaagtgggcatcctcgctagctggttcaagggctggaatgagtgt
gagcagacagtggccctactgtcacttctgaagcgggtcacccgtacccaagcccgcttt
ctgcagctctgcttggagcactcgctggcagactgcaatgatatccacctgctggaatca
gaggccaacagtgctgccatcgtcagccagtggcaacaggagtccaaagagaaggtggtg
tccctcctgctgtcccatctgcccctgctccagccaggcaacacagaggccaagtccgag
tacatgagactgctgcagaaagtgctggcctattccatcgagagcaatgccttcattgag
gagagccgccagctcctctcctatgccctcatccacccagccaccacgctggaggaccgc
aatgcgctagccctctggctgagccacctggaagagcggctagctagtggtttccgcacc
cggccagagccctcctaccattcacgccagggctcagatgaatggggcggacctgcagag
ctggcccctggagaggcagggccaggctggcaggacaagccaccccgggaaaacggacac
gtacccttccacccatccagctctgtgccgccggccatcaacagtattgggagcaatgca
aacacaggtctcccctgccaaatccaccctagcccactgaagcgctccatgtcactcatc
cctacgagcccgcaggcccctggtgagtggccgagtccagaggagcttggggcccgggct
gctttcaccacgcccgaccacgcacccctctcgccacagagcagtgtggcctcctctggc
agtgagcagacggaggagcagggctccagccggaacactttccaggaggatggcagcggg
atgaaagatgtgccctcatggctcaagagcctccgcttgcacaagtatgctgctctgttc
tcacagatgagctacgaggagatgatgaccctcactgagcagcacctagagtcgcagaat
gtcaccaaaggtgcccggcacaagatagccctgagcatccaaaagctgcgtgagagacag
agcgtcctcaagtccctagagaaggatgtgctggaaggtggcaacctgcggaatgctctg
caggaactgcagcagatcatcatcactcctatcaaggcctacagtgtccttcaggccacc
cctactgccaaggatgggggtcggggggagccgctgctgccaggtgctgagcctcccctc
acccaccctggatcagacaagggcactgaggccaaggaccctccagccgcagagaactat
cctcctccaccagctccagccccctctgatagcagtgagccagccccagctcccgtcgcc
gacggagacatacccagccagtttacacgggtgatgggcaaagtatgcacccagctgctg
gtgtcccgaccagacgaggagaacatcaccagttacctccagctcatcgaaaagtgcctg
actcatgaggctttcacagagacacagaagaagcggctgctgtcctggaagcagcaagtg
ctgaaactcctccggacattccctcgaaaagctgcactggacatgcagagctaccggcag
cagaagggctgggcatttggctccaactcgctccccatagctggctctgtggggatgggt
gtggcccggcggacccagcggcagttcccaatgcctcctcgggcattaccacctggcagg
atgggcctcctgagcccttcaggcattgggggtgtctctcctcgacatgcccttaccagc
cccagtcttgggggtcagggccgacagaacctgtggtttgccaatcctggaggcagcaac
agcatgcccagccagagccgcagctctgtgcagcgcactcactcgctcccagttcactcg
tcaccccaggctattctcatgttccctccagactgcccggtacctgggcctgacctggag
atcaatcccaccctggagtctctgtgtctgagcatgacagaacacgccttgggtgatggg
acagacaaaacctccaccatctga
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