Mus pahari (shrew mouse): 110330679
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Entry
110330679 CDS
T05929
Symbol
Vps54
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mpah01009
]
110330679 (Vps54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110330679 (Vps54)
Protein phosphatases and associated proteins [BR:
mpah01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110330679 (Vps54)
Membrane trafficking [BR:
mpah04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
110330679 (Vps54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
SBP_bac_6
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
110330679
NCBI-ProteinID:
XP_021066603
Ensembl:
MGP_PahariEiJ_G0016768
LinkDB
All DBs
Position
13:complement(9251171..9328803)
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AA seq
977 aa
AA seq
DB search
MASSHSSSPVPQGSSSDVFFKKEVDPTKRIRPVQSLPDVCPKEPTGDSHTLCVAPSLVTD
QHRWTVYHSKVNLPAALNDPTLAKRESDFFTKTWGLDFVDTEVIPSLYLPQISKEHFIAY
QQEISQREKIHERCKNICPPKDTFDRTLLHIHDKSRTDLEQVPKIFMKPDFALDDSLTFN
SVLPWSHFNTAGGKGSRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE
LQDYLKKTTQAVKMLRDKIAQIDKVMCEGSLQILRLALTRNNCVKVYNKLKLMATVHQTQ
PTVQVLLSTCEFVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFST
YSHSDLNRPLEGECQVLEEERLVSLVFGLLKQRKLNFLEIYGEEMIITAKNIIKERVINK
VSQIEEIDTDVVVKLADQMRMLNFPQWIDLLKDIFSKFTVFLQRVKATLNIIHSVVLSVL
DKNQRTRELEEISEQRSAGKDNSLDTEVAYLTHEGLFISDAFSEGEPASAAVDTTSQRNM
SPHSEPCSSDSVSEPECTTDSSSSKEQTPACAPPGGIEIIVSEDMRLTDLELGKLASNIQ
ELLCNASDVCHDRAVKFLMSRAKDGFLEKLNSTEFIALSRLMETFIVDTEQICGRKSTSL
LGALQSQANKFVNRFHEERRTKLSLLLDNERWKQADVPAEFQDLVDSIADGKIALPEKKP
AVTEERKPADVLIVEGHQYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLTDLLKYF
NSRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPVIRAHFEARLPPKQWSML
RHFDHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSPCFRNICKQMTKMHEA
IFDLLPEEQTQMLFLRINASYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQALK
GLKDLDLNMAEIWEQKR
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagccacagttcttctccagtgcctcaaggaagcagcagtgatgttttcttt
aaaaaagaggtagatccaacaaaacgcattcgacctgtgcagtcactgccagatgtgtgt
cccaaggaacccacaggtgattcacatactttatgtgttgccccatctctagttacagat
caacatagatggactgtgtatcattccaaagtaaatctcccagcagcattaaatgatcct
acactagcaaaaagagaatctgacttcttcacaaaaacttggggattggactttgtggac
accgaagtcataccttcactctacctcccacagatcagcaaggagcattttatagcatat
cagcaggaaatctctcagagagagaagattcatgagagatgcaagaatatttgtcctcct
aaagatacctttgacaggactcttttacatattcatgacaaatccaggacagatctggag
caagtacctaagatttttatgaaaccagattttgccttggatgattctttaacttttaat
tcagttttaccatggtctcattttaatactgctggtggaaaaggaagtcgtgatgcagct
tcttccaagttgcttcaagaaaagctgagccattatctggatattgtggaagtaaacatt
gctcaccagatctctctacgttcagaagcattttttcatgcaatgacctctcaacacgaa
ttgcaggactacctcaagaaaactacccaggctgtaaaaatgcttcgagataaaattgca
cagattgataaagttatgtgtgaaggatcactacagattttaagactggcacttaccaga
aataattgtgttaaagtatacaataaactgaagttaatggccactgtacaccaaactcag
cctacagtgcaggtgttgttgtctacttgtgaatttgtgggagcattggacttaatagca
acaactcaagaggttctgcagcaggagcttcagggcatccacagcttccggcatttggga
tcacagctttgtgaattagaaaagctgattgataaaatgatgattgcagaattttctact
tattctcatagtgacttaaatagaccactggaaggtgaatgtcaagttttagaagaggaa
agattagtatctcttgtatttgggcttttgaaacaaagaaaacttaattttttagaaatc
tatggtgaagaaatgattattacagcaaagaacatcattaaagagcgtgtgattaataaa
gtttcacaaatagaagaaatagacacagacgttgttgtaaagcttgcagatcaaatgaga
atgttgaattttccccaatggattgatctgttaaaggatattttctctaagtttacagtt
ttcctacagagagttaaggcaacattgaatattatccacagtgttgttctctcagttctt
gacaaaaaccaaaggactagagaattggaagagatctcagagcagaggagtgctgggaag
gacaactccttggacacggaggtggcttacctgacacacgagggcttgttcataagtgat
gctttcagtgagggtgagccagcatctgcggcggttgatactacctctcaaagaaacatg
tctccacatagtgagccctgcagcagtgattcggtatcagaaccagaatgtactactgat
tcttcatccagcaaggagcagacaccagcctgtgctcctccaggaggtatagagattata
gtcagtgaagacatgaggttaactgacttggagctaggaaaactagcaagtaacatccag
gagttattgtgtaatgcttcagatgtatgccacgatcgagctgtcaaatttctcatgtca
agagcaaaggatggttttcttgaaaaattgaattccacggaattcatagcactgtcgaga
ttaatggagacgttcatagtggacactgagcagatctgtgggaggaagagcacatcacta
cttggggcccttcagagccaagcaaataagtttgtgaacaggtttcatgaagagaggcgg
accaagctcagcctcctcttagacaatgagcgttggaagcaggctgatgttcccgcagaa
tttcaggatcttgttgattctatagcggatggaaagattgctttacctgaaaaaaagcca
gcggttacagaagaaaggaagccagctgatgttcttattgttgagggacaccagtatgca
gttgttggaactgttttgctgttaataagaatcattcttgaatattgccagtgtgtggat
aacatcccctccgtcactactgacatgctcactcgtctgacagatttgctgaagtacttc
aattcaagaagttgccagttagttcttggagctggtgctttgcaagttgttggactaaaa
acaattactacaaaaaacttggccctctcttcgcggtgtctgcagttgattgtgcactac
attcccgtgatccgggctcactttgaagcccgactgccccccaagcagtggagcatgctt
aggcattttgatcacatcaccaaggattaccatgaccatatagctgaaatatcagctaag
cttgtagcgataatggatagcctatttgataaactgttatcaaagtatgaggtgaaagct
cctgttccttccccgtgtttcaggaatatttgtaagcaaatgacaaaaatgcatgaagct
atatttgatcttcttcccgaagaacaaacacagatgttattcttaagaattaatgcaagt
tacaaactccacttgaaaaaacagttatcacacttaaatgtaataaatgatggaggacct
caaaatgggttggtcacagcagatgtagctttttacactggaaatcttcaagccttaaaa
ggccttaaagatctggatctaaatatggccgagatctgggaacagaagaggtga
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