Mus pahari (shrew mouse): 110330750
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Entry
110330750 CDS
T05929
Symbol
Cnga1
Name
(RefSeq) cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04022
cGMP-PKG signaling pathway
mpah04024
cAMP signaling pathway
mpah04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
110330750 (Cnga1)
04022 cGMP-PKG signaling pathway
110330750 (Cnga1)
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
110330750 (Cnga1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mpah04040
]
110330750 (Cnga1)
Ion channels [BR:
mpah04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
110330750 (Cnga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
CDC45
Ion_trans_2
Tim54
NPR3
Ndc1_Nup
Sec62
RNA_pol_Rpc4
SLC52_ribofla_tr
Peptidase_U57
CLN3
DUF2828
ADI
Zip
DDHD
RR_TM4-6
Motif
Other DBs
NCBI-GeneID:
110330750
NCBI-ProteinID:
XP_021066703
Ensembl:
MGP_PahariEiJ_G0017065
LinkDB
All DBs
Position
13:complement(62941178..62978595)
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AA seq
684 aa
AA seq
DB search
MKTNIINTWHSFINIPNVIVPAIEKEIRWMENGACSSFSDDNNGSLSEESENEDSLFRSN
SYKRRGPSQREQHLPGTMALFNVNNSSNKDQEPKEKKKKKKKEKSKADDKNENKKDPEKK
KKKEKEKEKKKKEEKTKDKKEEEKKEVVVIDPSGNTYYNWLFCITLPVMYNWTMIIARAC
FDELQSDYKEYWLIFDYVSDVVYLADMFVRTRTGYLEQGLLVKDKMKLIQRYKANLQFKL
DFLSVIPTDLLYLKFGWNYPEIRLNRLLRISRMFEFFQRTETRTNYPNIFRISNLVMYIV
IIIHWNACVYYSISKAIGFGNDTWVYPDVNDPEFGRLARKYVYSLYWSTLTLTTIGETPP
PVLDSEYIFVVVDFLIGVLIFATIVGNIGSMISNMNAARAEFQSRVDAIKQYMNFRNVSK
DMEKRVIKWFDYLWTNKKTVDEREVLRYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLL
VELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEIS
ILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKTMLEEKGRQILMKDGL
LDINIANMGSDPKDLEEKVTRMEGSVDLLQTRFARILAEYESMQQKLKQRLTKVEKFLKP
LIETEFSALEEPRGESEPTESLQD
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaaatattatcaatacgtggcattccttcataaatattcccaatgtgatcgta
ccagctattgagaaggaaatccggtggatggaaaatggagcatgcagctccttttctgat
gacaacaatggctctctgtctgaagaatcagagaatgaggactctctctttaggagcaac
tcatacaaaaggcgaggaccatcccagagggagcagcacttgccaggcactatggctctt
ttcaatgtcaacaacagcagcaacaaagaccaagagccaaaggagaaaaagaaaaagaag
aagaaagagaagagcaaggccgatgataaaaatgaaaataaaaaggacccagagaagaaa
aagaagaaggaaaaggaaaaagagaagaaaaagaaggaggagaaaaccaaagataagaaa
gaagaggagaagaaagaagtcgttgttattgatccttcaggaaacacgtactacaactgg
ctgttttgtatcactttacctgtgatgtacaactggacgatgattattgcaagagcatgt
tttgatgaactccagtctgattacaaagaatactggctcatttttgattatgtatcagat
gtcgtctatcttgccgatatgtttgtacgaacaaggacaggttacctggaacaagggctg
ctagtgaaagacaaaatgaaactcatccagagatacaaagcaaacctgcagtttaaactt
gactttctgtcagtgataccaactgatctgctgtacttaaagtttgggtggaactatcca
gaaatcaggctaaaccggctgttaaggatctctcgaatgtttgagttcttccagaggacg
gaaacaaggaccaactacccgaacatctttaggatttctaaccttgtgatgtacatcgtc
atcatcattcactggaatgcttgtgtgtattattctatctcaaaagctattggatttggg
aatgacacatgggtctaccctgatgttaatgatcctgaatttggccgtttggctagaaaa
tacgtctacagtctttattggtctaccttgactttgacaaccatcggtgaaactccacct
cccgtgctggattctgagtacatctttgtggtggttgacttcttaattggagttttaatt
tttgccaccattgtcggtaacataggttccatgatttccaatatgaatgcggcccgggca
gaatttcaatcaagagttgacgctatcaaacagtacatgaattttcgaaacgtaagcaaa
gatatggaaaaaagggttattaaatggtttgactacctgtggaccaacaaaaaaacagtt
gatgagagagaagtcctgagatacctccctgacaaactaagggcagaaattgccatcaac
gttcatctggacacgttaaaaaaggttcgcatctttgctgactgtgaagctggtctgttg
gtggagttggtgttgaaactacaaccccaggtatatagtcccggagattacatatgcaag
aaaggggacattgggcgggagatgtacatcatcaaggaaggcaaacttgctgtggtggca
gatgatggaattacacagtttgtggtgttgagcgacggcagttacttcggtgagatcagc
attcttaatatcaaaggcagcaaggctggcaaccgaagaacagccaacatcaagagcatt
ggctactcggacctgttctgcctctccaaagatgacctcatggaagctcttacagagtac
ccagacgccaaaactatgctggaggagaaagggaggcagatcttaatgaaagatggtctg
ctggatataaacattgccaatatgggcagtgaccctaaagacctggaagagaaggtcact
cgaatggaggggtcagtggacctcctgcaaacgcgatttgcccgtatcttggctgaatat
gagtcgatgcagcagaaactcaagcaaagattaaccaaggtcgagaaatttctgaaaccg
cttattgaaacagaattttcagctctggaggaacccaggggggaaagtgagcccacagag
tctctacaggactga
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