Mus pahari (shrew mouse): 110330792
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Entry
110330792 CDS
T05929
Symbol
Hfm1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpah03036
]
110330792 (Hfm1)
Enzymes [BR:
mpah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110330792 (Hfm1)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Meiosis-specific proteins
Others
110330792 (Hfm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
Helicase_C
ResIII
DEXQc_Suv3
AAA_22
Motif
Other DBs
NCBI-GeneID:
110330792
NCBI-ProteinID:
XP_021066772
Ensembl:
MGP_PahariEiJ_G0017268
LinkDB
All DBs
Position
13:complement(94716121..94795688)
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AA seq
1434 aa
AA seq
DB search
MPKSDDCFFSMDNLFFSSPDETENFPVKEKSPDWFLPPAPLISEIPDIQELEEEIESYKL
LGKGKMPRMLTSNLKIINEDTNCISPTQKFHFPCNVHEQDYLNLGGSNNNEMSHIAGKLI
YGSSQKYKNHMGSKSPSAKSSPGDTKLNNATEDREGTSAFKNRLSRTCDNVHDYDYADGS
LTLSSHISSVKLTQTKISKENAWTCSNSKQKRQYSTNKFKANDAFSASGIGKDIVKAPSF
SAASQPRDIQGIIPNGLGSLKAVTEIPAKFRSIFKEFPYFNYIQSKAFDDLLYTDRNFVI
CAPTGSGKTVVFELAITRLLMEVPLPWLNMKIVYMAPIKALCSQRFDDWKEKFGPIGLNC
KELTGDTVMDDLFEIQHASIIITTPEKWDSVTRKWRDNSFIQLVRLFLIDEVHVIKDENR
GPTLEVVVSRMKTVQSLCRALESASPVPVRFVAVSATIPNAEDIAEWLSDGERPAVCLKM
DESHRPVKLQKVVLGFPCSSSQTEFKFDLALNYKVYSVIRTYSDQKPTLVFCSTRKGVQQ
AASVLVKDAKFIISVEQKLRLQKSAYSIRDSKLKDALVYGVGYHHAGMELSDRKLVEGLF
TSGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHYSGGVFEEYSETDILQMIGRAGRPQFDT
TATAVIMTRLSTREKYIRMLACNDAVESSLHRHLIEHLNAEIVLHTITDVNIALDWIRST
MLYIRALKNPSHYGFSSGLNKDGIEAKLQELCLKNLKDLSSLDLIKMDEDVNFKPTEAGR
LMAWYYITFETVKKFCAISGKETLSDLISMISSCNEFLDVQLRISEKKILNTLNKDPNRI
TIRFPMAERIKTREMKVNCLIQAQLGCIPIQDFALTQDTVKIFRNGSRIARWLSDFVAAQ
EKKFAVLLNSVILTKCFKCKLWENSKHVSKQLDKIGISLSNTMVNAGLTSFKKIEEANAR
ELELILNRHPPFGTQIKEAVTYLPKYELEVEQIARYSDTKAEILVTILLRNFEQLQTKRT
APDFHYATLIIGDADNQVVFKHKIMDSVLLKSGNWVKKVDVKRALISEDLSINLISSDYV
GLDIHQKFTVFYFGPRKFVNETVMERSSETDISHSQYSGRATAAGSSTGMATCKRTGNRE
CHHHCKNKHACGHDCCKIGVAQKPEVKESTVSSYLSDLKSRDAVSSLSLAKRLKIQMKKS
QNVDLKKFGFTPRPSLSSISRSEYLNTPELSILEQRNQHETYGKVQQGPSEYRDKEVPGV
NLELGNEVWDDFDDESLIEVMSLSADAEKVAASGFGDTRDSSLGGNKLPFQKSSSRFQRD
NSNSFASSPEKPDASLPDCPRANFGPYSVAEFPQQAGNASLVNLQERRPLTLSPVIKRMC
FTDSKKTSQSPNFKEVDIFIGNSDSKKEIDLSKYYPDDAAEEMKALLGIFNGIF
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagtcagatgattgcttcttttccatggataatttgtttttcagtagcccagat
gagactgaaaactttccagttaaggaaaaatcaccagattggtttctccctccagctcca
ctgatttcagaaattccagatattcaagagttagaggaagaaattgaaagttataagcta
ttaggaaaaggaaagatgccaagaatgttaacatcaaacttgaagatcattaatgaagac
acaaattgtatttcaccaacacaaaaattccattttccgtgtaatgtacatgaacaggat
tacctaaatttaggaggatcaaataacaatgaaatgtcacatatagctgggaagctgata
tatggttcttctcagaagtataaaaatcacatgggcagtaagagtccatctgcaaagagt
agtcctggtgatacaaaattaaataatgctacagaagacagagagggtacatcagcattc
aaaaacagactttctagaacatgtgacaatgtacatgactatgactatgctgatggaagt
ttaaccttgagttctcatatcagctcagtgaaacttacccaaacgaaaataagcaaagag
aatgcatggacctgtagcaatagtaagcagaaacgtcaatattctacaaacaaattcaaa
gcaaatgatgctttttctgcttctggaattggaaaagacatagtcaaagcaccatcattt
tctgctgcatctcagcctcgtgatattcaaggcataattccaaatggcttaggttccttg
aaagctgtcacagaaatcccggcaaaatttagaagtatattcaaagaattcccttacttc
aactatatacaatccaaagcctttgatgatcttctttacacagataggaattttgtgatt
tgtgcccccactggttctgggaaaactgtagtatttgagttagcgataacaagattgtta
atggaagtaccattgccatggctaaacatgaaaattgtttacatggcaccaataaaagcc
ctttgtagtcagcggtttgatgactggaaagaaaagtttggaccaataggcttgaattgt
aaagaacttactggtgatacagtaatggatgacctgtttgagattcagcatgcaagtata
attataacaaccccagagaagtgggacagtgtgactaggaagtggagagacaactctttc
atccaactggttcgactgtttctcattgatgaggtgcatgttattaaagatgaaaatcgt
ggtccaactcttgaggttgtagttagcagaatgaaaactgtacagtctttatgtagggct
ttagaaagtgccagccctgttccagtgagatttgtagctgtctctgcaacaattcccaat
gctgaggatatcgcagaatggctttcagatggtgagagacctgctgtatgtctgaaaatg
gatgagagccatagacctgtgaaacttcagaaagtagtcctgggttttccctgcagtagt
agccaaactgaatttaagtttgatctggccctcaactataaagtgtacagtgttattaga
acatactccgatcagaagcccacacttgtgttttgttcaacaaggaaaggtgtgcagcag
gctgcttctgttcttgtgaaggatgctaagtttatcatctctgtggagcagaaactacgg
ttgcagaagtctgcatattctataagggattcaaagctgaaagatgccttggtctatggt
gttggttaccatcacgctggaatggagctgtcagacagaaagctggttgaagggttgttt
acctctggggatctacccgttcttttcactaccagtactctagctatgggcgtgaacttg
ccggctcacctggtcgttataaagtctaccatgcactacagtggaggtgtgtttgaagag
tacagcgagactgacatcctacagatgattgggagagctggcagaccccagtttgacacc
acagctacggcagttattatgactcgattaagtacaagagagaagtacattcggatgcta
gcttgtaacgacgctgtagagagcagtttgcacagacatcttattgaacatttaaatgca
gaaatagtgctgcacaccatcaccgacgtgaacattgctctggactggatccgatcaaca
atgctgtatatcagagctctgaaaaacccatctcactatggtttttcatctggattgaac
aaagatggaattgaagcaaaattacaagaattatgtttgaagaatctgaaagatttatca
tcactagacctgataaagatggatgaagatgttaatttcaaaccaacagaggcaggaaga
ctaatggcttggtattatattacatttgagacagtcaagaaattttgtgcaatcagtgga
aaagaaactttatcagatttaatttcaatgatatccagctgcaatgagtttctagatgtg
cagctgaggataagcgaaaagaaaatactgaataccttaaacaaagacccaaaccggata
actatcagatttccaatggcagaaagaattaaaacaagagaaatgaaagtaaactgtctt
attcaggctcagctaggatgcattcctatacaagattttgctttgacacaagatacagtg
aagattttcagaaatggctcacgaattgcaagatggttgtcagattttgtggctgctcag
gaaaagaagtttgctgtgcttttaaacagtgtgattttaactaaatgttttaagtgtaaa
ctctgggaaaactctaaacatgtatcaaaacagctggataaaattggcatatcattgtca
aataccatggtaaatgcaggcttaacttcttttaagaaaatagaagaagcaaatgcaaga
gaacttgaactgattttaaatagacacccaccatttgggacccagataaaagaagctgtg
acgtatctgccgaagtatgagcttgaggtggagcagattgcaagatacagtgataccaag
gcagaaatactggtgaccattttattaagaaactttgagcagctgcaaactaaaagaaca
gcaccagactttcactatgccaccttaatcataggtgatgcagataaccaagtcgttttt
aagcacaaaattatggattctgtcttgttaaaaagtggaaattgggttaaaaaagttgat
gtgaagagagctcttatatcagaagatctcagcataaatctaattagttctgattatgtt
ggtcttgatattcaccagaaatttacagtcttttattttggacccaggaagtttgtaaat
gaaacagttatggaaagaagctcagaaacagatatttctcattctcaatactcaggtaga
gctactgcagcaggatccagtacaggaatggctacctgcaaaagaactgggaaccgagaa
tgccatcatcattgtaaaaataaacatgcttgtggacatgactgctgtaaaattggagtt
gcacaaaagccagaagttaaagagtcaacagtgtcttcgtatctgtctgatttaaaaagc
agagatgctgtttcttctctttctctagccaagcgactcaagatacagatgaagaaatct
caaaatgtagaccttaaaaagtttggttttactccaaggccttccctttctagtatatca
aggtcagaatatttaaatacccctgaattgtcaatattagaacagaggaatcagcatgaa
acctatggaaaagttcaacagggaccttctgaatatcgtgacaaagaagttccgggtgtg
aacttagagctgggaaatgaagtctgggatgactttgatgatgagagcttaatagaagtt
atgagcctctcagccgatgctgagaaggtggctgcatcaggatttggagacactcgtgat
tcaagtctcggcggaaataagctacccttccaaaagtcaagcagcagattccaaagagac
aactcaaacagttttgcttcatcgcctgagaagccagatgcttctttaccagattgtccc
agggccaactttgggccatactctgtggcagagttccctcaacaagctggaaatgcaagt
cttgtcaatctacaagagagaagaccgctgactctctcaccagtgattaagaggatgtgc
tttaccgactctaagaaaacatcacagtctcccaattttaaggaagtggatatttttatt
ggaaacagtgactctaaaaaggaaattgatcttagtaagtattatcctgatgatgcagct
gaagaaatgaaggcccttctggggatatttaatggcattttctaa
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