Mus pahari (shrew mouse): 110330940
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Entry
110330940 CDS
T05929
Symbol
Prom1
Name
(RefSeq) prominin-1 isoform X1
KO
K06532
prominin 1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
110330940 (Prom1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mpah04147
]
110330940 (Prom1)
04090 CD molecules [BR:
mpah04090
]
110330940 (Prom1)
Exosome [BR:
mpah04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
110330940 (Prom1)
CD molecules [BR:
mpah04090
]
Proteins
110330940 (Prom1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
TMP_3
DUF1664
Baculo_PEP_C
WLS-like_TM
RasGAP_C
FliD_N
SUR7
Collagen_mid
PUMA_CC
NBAS_11th
Laminin_II
DUF3573
DUF2207_C
Spectrin_Anc-1
Motif
Other DBs
NCBI-GeneID:
110330940
NCBI-ProteinID:
XP_021066908
Ensembl:
MGP_PahariEiJ_G0016980
LinkDB
All DBs
Position
13:complement(36696589..36800555)
Genome browser
AA seq
873 aa
AA seq
DB search
MALVFSALLLLGLCGKITSEGQPAFDNTPGALNYELPTTKYETQDTFNAGIVGPLYKMVH
IFLNVVQPNDFPLDLIKKLIQNKKFDISVDSKEPEIIVLALKVAFYEIGVLICAILGLLF
IILMPLVGCFFCMCRCCNKCGGEMHQRQKQNASCRRKFLGLSLLVICLLMSLGIIFGFVA
NQQTRTRIKGTQKLAESNFRDFQTLLTETPKQIDYIWEQYTNTKNKAFSDLDGIDSVLGG
RIKDQLKPKVTPVLEEIKAMATAIKQTKDALQNMSSSLKSLQDATTQLSTNLTSVRNSIE
TSLNSSDCATDPASKICDSIRPSLNSLGSNIDSSQLPSVDRELNTVTDVDKTDLESLVKR
GYMTIDEIPNTIQNQTVDVIKDVKKTLDSVSSNVKNISQSIPIEDVLFQVAHYLNDSNRY
LNQELPKLEEYDSYWWLGGLIVCFLLTLIVTFFFLGLLCGVFGYDKHATPTRRGCVSNTG
GIFLMAGVGFSFLFCWILMILVVLTFVVGANVEKLLCEPYENKKLLQVLDTPYLLKEQWQ
FYLSGMLFNNPDINMTFEQVYRDCKRGRGAYAAFQLENVFNISKNLNIEQLSENITKELE
KLKVNIDSIELLDNTGRKSLENFAHSGVDTIDYSTYLKETEKSPTEVNLLTFASTLEAKA
NQLPEGQLKQAFLLDAQNIRAIHQQQVPPVQQSLKFVRVRNTLRQSVWTLQQTSNKLPDK
VKKILASLDSVQDFLTNNVSLIVIGETKKFGKTILGYFEHYLHWVLYAITEKMASCKPMT
TVMDSAINGILCGYVADPLNLFWFGIGKATMLLLPAVIIAIKLAKYYRRMDSEDVYDDVE
TVPMKNLENGSNGYHKDHLYGVHNPVMTSPSRY
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggctcttgtcttcagtgccctgctgttactggggctgtgtggaaagatcacttcagaa
ggtcagcctgcattcgataacactcctggggctttgaattatgaattgcctaccaccaaa
tatgagacccaagacaccttcaatgccgggattgttggccctctctacaaaatggtgcac
atcttcctcaacgtggtccagccgaatgacttccctctcgatttgatcaaaaaactcata
cagaacaagaagtttgacatctcagttgattccaaggagccagaaatcatagtcttggct
ctgaaggttgccttctatgagatcggagttcttatctgcgccatcctgggactgctgttc
attatcctcatgcctctggtgggctgcttcttttgtatgtgccgttgctgcaacaaatgc
ggcggagagatgcaccagcggcagaagcagaatgcgtcttgccggaggaagttcttgggc
ctctccctcctggtgatttgtctgctcatgagccttggcattatatttggctttgtggct
aaccagcagacgaggactcggatcaaagggacccagaaacttgcagagagcaatttcaga
gactttcaaacgctcctgactgaaaccccaaagcaaattgactatatatgggagcaatac
actaacaccaagaacaaggcgttctcagacctggatggcatcgattccgtgctgggaggc
agaataaaggaccaactaaaacccaaagtaactcctgttctcgaagaaattaaggccatg
gccacagccatcaaacagaccaaggatgccctgcagaacatgagcagcagcctgaaaagt
ctccaagatgcaaccacccagctcagcaccaacctgacctctgtgagaaacagcatagag
acttcactcaacagcagcgactgtgctacagacccagccagcaagatctgcgacagcatc
agaccaagcctaaacagtctggggagcaacatcgattcaagtcagctcccatcagtggat
agagaactcaacaccgttactgatgtcgacaaaactgatctggagagcctcgtcaaaagg
gggtatatgacgattgatgaaatacccaatacaatacaaaaccaaactgtggatgtcatc
aaagatgtcaagaagaccttggattccgtcagctccaacgttaagaacatcagccaaagt
attcctattgaggacgtgctgtttcaggttgcccattaccttaatgacagcaacagatac
ttaaaccaggagctgcccaagcttgaagaatacgactcgtactggtggctgggtggctta
attgtctgcttcctgctgaccctcattgtgactttctttttcctgggcttgttgtgtggt
gtgtttggctatgacaagcatgccaccccaaccagaagaggctgcgtgtccaacactgga
ggcatcttcctcatggctggggttggattcagcttccttttttgctggatattgatgatc
cttgtggttcttacttttgttgttggtgcaaatgtggaaaagttgctctgtgaaccttat
gaaaacaagaaattattacaggttttggacactccctatctgctcaaggaacaatggcaa
ttttatctctctggcatgctattcaataacccagacattaacatgacctttgagcaagtc
tacagggattgcaaaagaggtcggggcgcatatgctgcttttcagcttgagaatgtcttc
aacatcagtaagaatttgaacattgagcagctttctgagaacataactaaggagttggaa
aaactgaaggtgaacattgatagcatcgaactgttggataacacaggaaggaagagcctc
gagaactttgcacactctggggtagacacaatcgattactccacgtacttgaaggagact
gagaaatcccctaccgaagtgaatctgctgacatttgcctctactctagaagcaaaagca
aaccagttgcctgaaggacagttgaagcaggccttcttactggatgcacagaatataaga
gcgatccaccagcagcaagtccctcctgtgcagcaatcactgaaatttgtgagggtgagg
aatacattaagacaaagtgtctggactctccagcaaacaagcaacaagttgccggataaa
gtgaagaagatccttgcctctttggattctgttcaggatttcctcaccaataacgtttcc
ctcatcgttattggagaaacaaagaagtttgggaaaacaatactaggctactttgaacat
tatctgcactgggtcttgtatgctatcacagagaagatggcatcctgcaaacccatgact
accgtgatggactctgctattaatggcattctgtgtggttatgttgctgaccctctgaat
ttgttctggttcggcatagggaaagccacgatgctcttacttccggctgtaatcattgct
atcaagctggccaagtactatcgcaggatggattcagaggatgtatacgacgatgttgag
actgtgcccatgaaaaatttggaaaacggtagtaatggttatcataaagatcatttatat
ggtgttcacaatcctgttatgacaagcccgtctcgatactga
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