Mus pahari (shrew mouse): 110331047
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Entry
110331047 CDS
T05929
Symbol
Sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04517
IgSF CAM signaling
mpah04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110331047 (Sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110331047 (Sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mpah04812
]
110331047 (Sptbn1)
Cytoskeleton proteins [BR:
mpah04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
110331047 (Sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
110331047 (Sptbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
PH_11
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
110331047
NCBI-ProteinID:
XP_021067033
Ensembl:
MGP_PahariEiJ_G0016727
LinkDB
All DBs
Position
13:710189..879463
Genome browser
AA seq
2363 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERII
YIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEITNYRPTIDTLHEQASALPQAHAESPDVKGRLAGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIRAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQSLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKISAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKHNLLASKEIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITDSSSLNA
EAIRQRLADLKQLWGLLIEETEKRHRRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEK
AKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLY
AGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERF
REFARDTGNIGQERVDTVNNMADDLINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQI
LAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQV
RQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACEGRRVRLVDTGDKFRFFSMV
RDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLAR
KHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYL
SSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEEKKRRP
PSPDPNTKVSEEAESQQWDASKGGQVSQNGLPAEQGSPRMAGTMETSEMVNGAAEQRTSS
KESSPVPSPTSDRKAKSALPAQSAATLPARTLETPAAQMEGFLNRKHEWEAHNKKASSRS
WHNVYCVINNQEMGFYKDAKGAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLSD
GNEYLFQAKDDEEMNTWIQAISSAISSDKHDTSASTQSTPASSRAQTLPTSVVTITSESS
PGKREKDKEKDKEKRFSLFGKKK
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacggtagccacagactatgacaacattgagatccagcagcagtacagtgat
gtgaacaaccgctgggatgtggatgactgggacaatgagaacagctctgcacggctcttt
gagcgctcccgcatcaaggccctggcagatgagcgtgaagccgtacagaagaagaccttc
accaagtgggtcaattcccaccttgcgagagtgtcctgccgaatcacagacctgtacacc
gaccttcgagatggacggatgctcatcaagctactggaggtcctctctggagagaggctg
cctaaacccactaagggacggatgcggatccactgtttggagaatgtcgacaaggctctt
caattcctgaaagagcagagagtccatcttgagaacatgggctcccatgacattgtggat
ggaaaccaccggctgacccttggcctcatctggactattattctgcgcttccagatccag
gatatcagtgtggagactgaagataacaaagagaaaaagtctgctaaggatgcactgctg
ctctggtgccagatgaagacagctgggtaccccaatgtcaacattcacaatttcaccact
agctggagggatggcatggccttcaatgcactgatacataaacaccggcctgacctgata
gattttgataaactgaagaaatctaatgcacactacaatctgcagaatgcatttaacctg
gcagagcagcaccttggcctcaccaaactgttagaccctgaagatatcagtgtggaccac
cctgatgagaagtctatcatcacatacgtggtgacttactaccactacttctccaagatg
aaggccttggctgtcgaaggaaagcgcattggaaaggtgcttgataatgctatagaaaca
gagaaaatgattgagaagtatgagtcacttgcttctgaccttctggagtggattgaacaa
accatcatcatcctaaacaaccgcaaatttgctaattcactggttggggtccaacagcag
cttcaggcattcaacacgtaccgcacagtggagaaaccacctaagtttaccgagaagggg
aatttggaggtgctgcttttcacaattcagagcaagatgagagctaataatcagaaggtc
tacatgccccgagaagggaagctcatctctgatatcaacaaggcctgggaaagactggaa
aaagcagaacatgagagagaactggctctgcggaatgagctcatacggcaggaaaaactg
gaacaactcgcccgcagatttgatcgcaaggcagctatgagggagacatggctgagcgaa
aaccaacgtcttgtgtctcaggacaactttggatttgaccttcccgcagttgaggctgcc
accaaaaaacatgaggccattgagacagacatcgctgcatatgaagaacgagttcaggcc
gtggtggccgtggccagggagcttgaagcagagaactaccatgacatcaagcgtatcaca
gcgaggaaggacaatgtcatccggctctgggaatacttgctggaactgctcagggccagg
aggcagcgtcttgagatgaacctgggattgcaaaagatatttcaggaaatgctttatatt
atggactggatggatgaaatgaaggtgctattgctgtctcaagactatggcaaacactta
cttggtgttgaagacttattacagaagcatgcgctggttgaagcagacattgcaatccaa
gcagagcgtgtaagaggtgtgaatgcctctgcccagaagtttgcaacagatggggaaggc
tacaagccatgtgacccccaggtaattcgagaccgtgttgcccacatggagttctgctat
caagagctttgtcagctggcagctgagcgtagggctcgcctggaagagtcccgtcgcctc
tggaagttcttctgggagatggcagaagaggaaggctggatacgagagaaggagaagatc
ctgtcctctgatgattacgggaaagacttgaccagtgtcatgcgcctactgagcaagcac
cgggcatttgaggatgaaatgagtggccgtagtggccattttgagcaggccattaaagaa
ggtgaagacatgattgcggaggaacactttggatcagaaaagatccgtgagagaatcatt
tatatccgggagcagtgggccaacctggaacagctctcagccattaggaagaagcgccta
gaggaggcctcattactgcaccagttccaggctgatgctgatgatattgatgcttggatg
ttagatatactcaagattgtctcgagcaatgatgtgggccatgatgagtactccacacag
tctctggtcaagaagcataaagatgtagcagaagagatcaccaactacaggcccactatt
gacacactgcatgagcaagccagtgcccttccacaagcacatgcagagtctccagatgtg
aagggccggctggcaggaattgaggagcgctacaaggaagtggcagagttaacacggcta
aggaagcaggctctgcaagacaccttggccctgtacaagatgttcagtgaggctgatgcc
tgtgagctctggattgacgagaaggagcagtggctcaacaacatgcagatcccagagaag
ctggaggacctggaagtcatccagcacagatttgaaagcctagaaccagaaatgaacaac
caggcttcccgggttgctgtggtgaaccagattgcacggcagctgatgcacagtggccac
cccagtgaaaaggaaatcagagctcagcaagacaaactcaacacgaggtggagtcagttc
agagaactggtagacaggaaaaaggatgctcttctgtctgccctgagcatccagaactac
cacctcgagtgcaatgaaaccaaatcctggatccgggagaagaccaaggtcatcgagtct
acccaagaccttggcaatgacctggcaggtgtcatggccctgcagcgcaagctgactggc
atggaacgggacttggtagccattgaggcaaagctgagtgacctgcagaaagaagctgag
aagctggagtccgagcaccctgaccaggctcaagctatcctgtctcggctggccgagatc
agtgatgtgtgggaggaaatgaagacaaccctgaagaaccgagaggcctcactgggagag
gccagcaagctgcagcagtttctgcgggacttggatgacttccagtcttggctctccagg
acccagactgcgatcgcctcagaggacatgcccaacaccctgactgaggctgagaagctt
ctcacacagcacgagaatataaaaaatgagatcgacaattatgaggaagactaccagaag
atgcgggacatgggtgagatggtcacgcaggggcagaccgatgctcagtacatgtttctg
cggcagcggctgcaggccttggacactggctggaatgagctccacaaaatgtgggagaac
aggcaaagcctcctctcccagtcccatgcctaccagcagttccttagggacacgaaacaa
gctgaagcttttcttaataaccaggagtatgttttggctcatactgaaatgcccaccacc
ctggaaggagctgaagcagccattaaaaagcaggaggacttcatgaccaccatggatgcc
aacgaggaaaagatcagtgctgttgtggagactggccgaagactggtgagcgatgggaac
atcaactcggaccgcatccaggagaaggtggattctattgatgacagacacaggaagaat
cgagaagcagccagtgaacttttgatgaggttaaaggacaaccgtgatctacagaaattc
ctgcaagattgtcaagagctgtcgctctggatcaatgaaaagatgcttacagctcaagac
atgtcatatgatgaagccagaaatctgcacagtaaatggttaaagcatcaagcatttatg
gcggaacttgcatccaacaaagaatggcttgacaaaattgagaaggaaggaatgcagctt
atttcagaaaagccagaaacagaagctgtggtaaaggaaaaactcactggtttacataaa
atgtgggaagtccttgaatccacaacccagaccaaggcccagcggctctttgatgcaaat
aaggctgagcttttcacacaaagctgtgcagatcttgacaaatggctacatggcctggag
agccagattcaatctgacgactatggcaaagaccttaccagcgtcaatattctgctgaaa
aagcaacagatgctggagaatcagatggaagttcggaagaaggagattgaggaactgcaa
agccaagcccaggcactgagtcaggaggggaagagcacagatgaagtggacagcaaacgc
ctcactgtgcagaccaagttcatggagcttctggagcccttgaatgagaggaagcataat
ctgttagcttccaaggagatccaccagttcaacagggatgtggaggacgaaattctgtgg
gttggtgagagaatgcctttggcaacttccacagatcatggccataaccttcaaactgtg
cagctgttaataaagaaaaaccagaccctccagaaagaaatccagggacaccagcctcgt
attgatgacatctttgagaggagtcaaaacatcatcacagatagcagcagcctcaatgct
gaggctatcaggcagaggcttgctgacctgaagcagctgtggggacttctcattgaggaa
actgagaaacgccatagacggctcgaggaggcacacaaggcccagcagtactactttgat
gcagctgaagcagaggcatggatgagtgaacaggaactgtacatgatgtctgaggaaaag
gccaaggatgagcagagtgctgtctccatgttgaaaaagcaccagattttagaacaagct
gttgaggactatgcagagacagtacaccagctctccaagactagccgggcgctggtggct
gacagccatcccgaaagtgagcgtattagcatgcggcagtcaaaggtcgacaagctgtat
gctggcctgaaggaccttgctgaggagaggagaggaaaacttgatgagaggcacaggctg
ttccagctcaacagagaggtagatgacctggaacagtggatcgctgagagggaagtggtc
gcaggctcccatgagttgggacaggactatgagcatgtcacgatgttacaagaacggttc
cgagaatttgctcgagacacaggaaacattgggcaggagcgtgtggatactgttaataac
atggcagatgacctcatcaactctggacattcagatgctgccaccattgctgagtggaaa
gatggtctcaatgaagcctgggctgacctcctggagctcattgacacaagaacacagatt
cttgctgcctcgtatgaacttcataagttttaccatgatgccaaggagatctttggccga
atccaggacaaacacaagaaactccctgaggagcttggaagagatcagaacactgtggaa
actttacagagaatgcacaccacctttgagcatgacatccaagctctgggcactcaggtg
aggcagctgcaggaagatgcagcccgcctccaggcagcctatgcaggggacaaggctgat
gacatccagaagcgtgagaatgaggtcctggaagcctggaagtccctgctggatgcttgt
gagggtcgcagggtgcggctggtagacacaggagacaagttccgcttcttcagcatggtg
cgtgacctcatgctctggatggaagatgtcatccggcagatcgaggcccaggagaaacca
cgggatgtgtcatctgttgaactgttaatgaataatcatcaaggtatcaaagctgaaatt
gatgctcgtaatgacagctttacagcctgcattgaacttgggaaatccctgctggcacgg
aaacactatgcttctgaggagatcaaggaaaagttactgcagttgactgagaaaagaaaa
gaaatgattgacaagtgggaagaccggtgggagtggttaagactgattttggaggtccat
cagttctcaagggatgccagtgtggcagaggcttggctgctcggacaggaaccataccta
tccagccgtgaaattggccagagtgtagacgaagtggagaagcttattaagcgccatgag
gcgtttgaaaagtctgcagcgacctgggatgagagattctctgctctggaaaggctgaca
acattggagctactggaagtgcgaagacagcaagaggaagaagaaaaaaagaggcggcca
ccttctccggacccaaacacgaaggtttcagaggaggctgagtcccagcaatgggatgct
tcaaaaggaggccaagtttcccagaatggtttgccggctgagcagggatctccacggatg
gcaggaaccatggaaacaagtgaaatggtcaatggtgctgctgagcagaggacaagctcc
aaagagtccagtcctgttccctctcccacctcggaccgaaaggccaaatctgcacttccg
gcccagagtgctgccaccctgccagccaggaccctggagacgcccgctgcccagatggaa
ggcttcctcaatcggaagcatgagtgggaggcccataataagaaagcctcgagcaggtcc
tggcacaatgtatattgtgtcataaataaccaagaaatgggcttctataaagatgccaag
ggtgctgcttctggcatcccctaccacagcgaggtccctgtgagtttgaaagaggccatc
tgcgaagtggcccttgattacaagaagaagaagcacgtgttcaagctaagactaagtgat
ggaaacgagtacctcttccaagccaaagatgatgaggaaatgaacacatggatccaggct
atctcctctgccatctcctctgacaaacacgacacatctgccagcacccagagtacgcca
gcatccagtcgggcgcagaccttacccaccagcgttgtcaccatcaccagcgagtccagt
cctggaaagagggagaaggataaagagaaagacaaagagaagaggttcagccttttcggc
aagaagaagtga
DBGET
integrated database retrieval system
