Mus pahari (shrew mouse): 110331355
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Entry
110331355 CDS
T05929
Symbol
Smg8
Name
(RefSeq) protein SMG8
KO
K18734
protein SMG8
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110331355 (Smg8)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
110331355 (Smg8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
110331355
NCBI-ProteinID:
XP_021067513
Ensembl:
MGP_PahariEiJ_G0018053
LinkDB
All DBs
Position
14:complement(54721212..54729818)
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AA seq
991 aa
AA seq
DB search
MAGPVSLRELLMGASAWLGSESPGGPSAEGAGNAAGTPEPPWREDEICVVGIFGKTALRL
NSEKFSLVNTVCDRQVFPLFHHQDPGDPGPGIKTKVVSVGEAGGAGDPGAAAGDSLRGGL
ATAEGNRAEPDPQDFSLLQAYYNQESKVLYLILTSICDNSQLLRACRALQSGEAGGGLSL
PHAETHEFWKHQEKLQCLSLLYLFSVCHILLLVHPTCSFDITYDRVFRALDGLRQKVLPL
LKTAIKDCPVGKDWKLNCRPCPPRLLFLFQLNGALKVEPPRSQDAAHPDKPKKHSPKRRL
QHALEDQIYRIFRKSRVLTNQSVNCLFTVPANQAFVYIVPGSQEEDPIGMLLDQLRSHCT
VKDPESLLVPAPLSGPRRYQAMRQHSRQQLSFHIDSSTTSSSGQLVDFTLREFLWQHVEL
VLSKKGFDDSVGRNPQPSHFELPTYQKWISAAAKLYEVAIDGKEEDLGSPTGELTSKILS
SIKVLEGFLDIDTKFSENRCQKALPMAHSAYQSNLPHNYTMTVHKNQLAQALRVYSQHAR
GPAFHKYAMQLHEDCYKFWSNGHQLCEERSLTDQHCVHKFHSLPKSGEKPEADRNPPVLY
HNSRARSTGACNCGRKQAPRDDPFDIKAANYDFYQLLEEKCCGKLDHINFPVFEPSTPDP
APAKNEPSPAPPDSDAEKLKEKEPQTQGESTSLSLALSLGQSTGSLGTYPADPQAGGDNP
EVHGQGDGKSEKRPNLVDRQASTVEYLPGMLHSNCPKGLLPKFSSWSLVKLGPAKSYNFH
TGLDQQGFVPGTNYLMPWDIVIRTRAEDEGDLDTNSWPAPNKAIPGKRSAVVMGRGRRRD
DIARAFVGFEYEDSRGRRFMCSGPDKVMKVMGSGPKESALKALNSDMPLYILSSSQGRGL
KPHYAQLMRLFVVVPDAPLQIILMPQVQPGPPPCPVFYPEKQEITLPPDGLWVLRFPYAY
VTERGPCFPPKENVQLMSYKVLRGVLRAATQ
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggcggggccggtcagcttgcgcgagctgctcatgggggcgtcggcctggctgggctct
gagagtcccggaggcccctccgctgaaggcgcggggaacgcggctggcacgcccgagccc
ccgtggagggaggatgagatctgcgtggtgggaatcttcggcaagacggctctgcgcctc
aactccgagaagttctctctggtgaacactgtgtgcgatcgacaggttttcccactcttt
caccatcaggatcctggagatccagggcctggaatcaagaccaaagttgtctctgtcgga
gaggcaggaggagccggggacccgggggctgctgctggggattcacttcgcggaggtctg
gctacagcggaaggtaaccgagctgagccagatccccaggactttagtcttttgcaggcc
tattacaatcaggaaagcaaagttctgtatcttattctcacttccatctgtgacaactca
cagctcctgcgtgcttgtcgggccctccagagcggtgaagctggagggggcctctcttta
ccgcatgcagaaacacacgagttctggaagcatcaggagaagttacagtgtctcagcctc
ctttacctcttctctgtctgtcatatcttgctcctggtccatccaacgtgttcctttgac
atcacttatgatcgtgtattcagagccctggatggactgagacagaaagtactacccctc
ctcaaaacagccattaaggactgcccagttggcaaagactggaagttaaactgccgacct
tgcccacctagactcctcttcctctttcaactcaatggcgcccttaaggtggaaccgcct
cggagccaagacgcagctcatccagataaacccaagaagcactctcccaaaagaagactg
cagcacgccctggaggaccagatctatagaatctttcgcaagagtcgagtcttgactaat
cagagtgtcaactgtctcttcacggtacctgccaaccaagcttttgtgtacatagtccct
ggaagccaggaggaggacccaattggcatgttgctggaccaacttaggagccattgtact
gtgaaagacccagaatcgttgttggtgcccgcacccctttctggacctaggcggtaccaa
gcgatgagacagcacagccggcagcagctctccttccacattgatagcagcaccacgagt
tcttcaggccagctagtggatttcactcttcgagaattcctgtggcagcacgtggagctg
gtcctaagcaaaaaaggttttgatgacagtgtgggtaggaacccacagccttcccatttt
gaattgcccacttaccagaagtggatctccgcagctgcaaagctgtatgaagtggctatc
gatgggaaggaagaggacctgggctcccccactggggagctaacatctaagattttaagc
agtattaaagtcttagaagggtttttggatatagacacaaaattctcggaaaaccggtgc
caaaaagctttacccatggctcatagtgcctaccagtcaaacttgccacataattacacc
atgacagtccataagaatcagctcgctcaggctcttcgggtatacagtcagcacgctaga
ggtccagccttccacaaatatgccatgcagttacacgaggactgctacaaattttggagc
aatggccatcagctatgcgaagagaggagcttgactgaccaacactgtgtccacaaattt
cactccttacctaaatcaggagaaaagccagaggcagataggaaccctcccgtgctctac
cacaatagccgagcccgctccaccggagcctgcaactgcggaaggaagcaggcaccccga
gacgaccccttcgatatcaaggctgctaactatgacttttaccagcttctggaagaaaaa
tgttgtgggaaattggatcatatcaatttccctgtatttgagccaagtactccagatcct
gctcctgctaaaaatgaaccctctcctgccccgccagactcggacgccgagaaactgaaa
gagaaagaacctcaaacccaaggggagagcacaagcctcagcttagcgttgagcttgggc
cagtcaacaggtagcctcggcacctatcccgctgacccacaggccggaggggacaaccca
gaggtccacggacaaggagacgggaaatctgagaagagaccaaacttggttgaccgtcag
gcatccacagttgaatatctcccaggcatgctacattcaaattgccccaaaggtctctta
cccaaattctccagctggtctttggttaaactaggcccagccaagtcttacaactttcat
acaggcttggaccaacagggcttcgttccaggaacaaactatcttatgccttgggacatt
gtcatcaggactagagctgaagatgaaggagatttagacacgaactcctggcccgctcca
aataaagctattcctgggaaaagaagtgcagttgtgatgggcagaggacggcggagggac
gacatagcccgagcttttgttggctttgagtatgaagactctcgaggtcggaggttcatg
tgctcagggcctgacaaagtaatgaaagtgatgggaagtggacccaaggagtcagcttta
aaagccctcaacagtgacatgcccctgtacatcctgtcctcgtcgcagggcagagggctg
aagccacattatgctcaacttatgaggctttttgttgtggttcccgatgctcctttgcag
ataatactgatgcctcaggttcaaccaggcccaccaccatgtccagtattttacccagaa
aaacaagaaatcactctcccacctgatggcctttgggtcttgaggtttccttatgcctat
gtgactgagagagggccttgcttccctcctaaagagaatgtgcagctcatgagctacaag
gtgctccgaggagtcctcagagcagctacacaatga
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