Mus pahari (shrew mouse): 110331394
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Entry
110331394 CDS
T05929
Symbol
Ubtf
Name
(RefSeq) nucleolar transcription factor 1 isoform X1
KO
K09273
upstream-binding transcription factor
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110331394 (Ubtf)
03021 Transcription machinery [BR:
mpah03021
]
110331394 (Ubtf)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
110331394 (Ubtf)
Transcription machinery [BR:
mpah03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
110331394 (Ubtf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
HMG_WDHD1
DUF4473
NDUF_C2
Motif
Other DBs
NCBI-GeneID:
110331394
NCBI-ProteinID:
XP_021067586
Ensembl:
MGP_PahariEiJ_G0018378
LinkDB
All DBs
Position
14:complement(69756398..69769587)
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AA seq
881 aa
AA seq
DB search
MNGEADCPTDLEMAAPKGQDRWSQEDMLTLLECMKNNLPSNDSSKFKTTESHMDWEKVAF
KDFSGDMCKLKWVEISNEVRKFRTLTELILDAQEHVKNPYKGKKLKKHPDFPKKPLTPYF
RFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFR
EDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVRPDEIMRDYIQKHPELNISEEGI
TKSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQ
KEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQTTSPASKKPSQ
EGGKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK
AREAALKAQTERKPGGEREDRGKLPESPKRAEEIWQQSVIGDYLARFKNDRVKALKAMEM
TWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQK
FSQELLSNGELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVKSL
SPQDRAAYKEYISNKRKNMTKLRGPNPKSSRTTLQSKSPRRRRRRKRRMTMRRRKRKTMR
TVTLLRTAGTLLSRAAKMKARTGMRMMMMMTMKMMKMTMMRMKTTSLRAVAPALHLQGTP
RILTPTEAQPLHPRQAARQPRRAAAELISPTDNLCLSLCSVPYPPDSPTFFLSFFFFFFF
FFISVGGRRLQESRLGLCSLGASAPGFSRDSNNWTEPALDRPTPPLFCICSSGMDNGLGS
LGVGASPKEFGEALHTCSLQRGGCSGGLSFPDGLATWIPPH
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgaacggagaagcggactgtcccacagacctggaaatggccgcccccaaaggccaagac
cgctggtcccaggaagatatgctgactctgctggaatgcatgaagaacaaccttccatct
aacgacagctccaagttcaagaccacagagtcgcatatggactgggaaaaagtcgcattt
aaggatttttcaggagatatgtgcaagctcaaatgggtggagatttccaacgaggtaagg
aagttccgtacattgacagaattgatccttgatgctcaggaacatgttaaaaacccttac
aaaggcaaaaagctcaagaaacacccggattttccaaagaagcctctcaccccttacttc
cgcttcttcatggagaagcgggccaagtacgcgaagctccacccggagatgagcaacctg
gacctgactaagatcctgtctaagaaatacaaggaacttccagagaagaagaagatgaaa
tatattcaggacttccagagggagaaacaggagttcgagcgaaacctggcccgattcagg
gaggatcaccctgaccttatccagaatgccaagaagtcggacatccccgagaagcccaaa
actccccagcaactgtggtacacccatgagaagaaggtgtatctcaaagtgcggccggat
gagatcatgcgggactatatccagaagcaccctgagctgaacatcagtgaggaaggtatc
accaagtccaccctcaccaaggccgagcgtcagctcaaggacaagttcgatgggcgaccc
accaagccgcctccgaacagctactccctgtactgtgccgagctcatggccaacatgaag
gatgtgcccagcacagagcgcatggtgctatgcagccagcaatggaagctgctctcgcag
aaggagaaggatgcgtatcacaagaaatgtgaccagaaaaagaaagattatgaggtggag
ctgctgcggttccttgagagcttgcccgaggaagagcagcagcgggtgctgggggaggag
aagatgctgaacatcaataagaagcagaccaccagtcccgcctccaagaagccttcccag
gaaggtggcaagggtggctccgagaagcccaagcggcctgtgtctgccatgttcatcttc
tcggaggagaagcgaaggcagctacaggaggagcgacctgagctctccgagagcgagctg
acccgcctgctggcccgcatgtggaacgacttgtccgagaagaagaaggctaaatacaag
gcccgggaagctgcgctgaaggcgcagactgagagaaagccgggcggggagcgtgaagat
aggggcaagctgcccgagtcgcccaagagagctgaggaaatctggcagcagagtgtcatt
ggagactatctagcccgcttcaagaatgaccgggtgaaagccttgaaagccatggagatg
acttggaacaacatggagaagaaggagaagctgatgtggattaagaaggcagcagaagac
caaaaacgatatgagagagagttaagtgagatgcgggcccctccagctgctacaaactct
tccaagaagatgaagttccagggggagcccaagaaacctcctatgaacggttaccagaag
ttctcccaggagctgctgtcaaatggggagctaaaccacctgccgctgaaggagcgcatg
gtggagatcggcagccgctggcagcgcatctcccagagccagaaggagcactataagaag
ctggcggaggaacagcagaggcagtacaaggtgcacttggacctctgggtcaagagcctg
tctccccaggaccgcgcagcatacaaagaatacatctccaataaacgtaagaacatgacc
aagctccgaggcccaaaccccaagtctagccggaccaccctgcagtccaagagtccgagg
aggaggaggaggaggaagaggaggatgacgatgaggaggaggaagaggaagacgatgaga
acggtgactcttctgaggacggcggggactcttctgagtcgagcagcgaagatgaaagcg
aggacggggatgagaatgatgatgatgatgacgatgaagatgatgaagatgacgatgatg
aggatgaagacaacgagtctgagggcagtagctccagctcttcatcttcaggggactcct
cggattctgactccaactgaggctcagcctctccaccccaggcaggcagccaggcagcca
aggagagccgctgcagagctcatctccccaactgacaacctttgtctctccctatgttct
gtcccatatcctccagactctcccactttctttctttcctttttcttttttttttttttt
ttttttatatcagtggggggtaggaggctgcaagagtccaggctaggactctgcagcctt
ggagcctcagctccagggttctccagggacagcaacaattggactgagccagcgctggac
cggcccacccctcccctcttctgcatttgcagttccggcatggacaatggactggggagt
ttgggggtgggagcgagtcctaaagagtttggtgaggccctccacacctgcagcctgcag
cgaggtggatgttccgggggcctttccttcccagatgggcttgctacctggatcccccca
cattga
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