Mus pahari (shrew mouse): 110331425
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Entry
110331425 CDS
T05929
Symbol
Ebf1
Name
(RefSeq) transcription factor COE1 isoform X1
KO
K09103
early B-cell factor
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110331425 (Ebf1)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
110331425 (Ebf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
110331425
NCBI-ProteinID:
XP_021067655
Ensembl:
MGP_PahariEiJ_G0017369
LinkDB
All DBs
Position
14:13141368..13529086
Genome browser
AA seq
592 aa
AA seq
DB search
MFGIQESIQRSGSSMKEEPLGSGMNAVRTWMQGAGVLDANTAAQSGVGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTAFVGFVEKEKEANSEKTNNGIHYRLQLLYSNGI
RTEQDFYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKH
GRRARRLDPSEGTPSYLEHAATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTML
VWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRL
QKVIPRHPGDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHN
QLPALANTSVHAGMMGVNSFSGQLAVNVSEASQATNQGFTRNSSSVSPHGYVPSTTPQQT
NYNSVTTSMNGYGSAAMSNLGGSPTFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSSG
IFSFSPANMVSAVKQKSAFAPVVRPQTSPPPTCTSTNGNSLQAISGMIVPPM
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggatccaggaaagcatccaacggagtggaagcagtatgaaggaagagccgctg
ggcagcggcatgaacgcggtgcggacgtggatgcagggcgccggggtgctggacgccaac
acagcggcgcagagcggggtgggtctggcccgggctcactttgagaagcagccgccttct
aacctgcggaaatccaacttcttccacttcgtcctggccctctacgacagacagggccag
cccgtggagattgagaggacggcctttgtggggttcgtggagaaggaaaaagaagccaac
agcgaaaagaccaataatgggatccactaccggctccagctcctctacagcaatgggata
aggactgaacaggatttctacgtgcgcctcatcgactccatgacaaaacaagccatagtg
tatgaaggccaagacaagaaccctgaaatgtgccgagtattgctcacacatgagatcatg
tgcagccgctgttgtgacaagaaaagctgtggcaaccgaaatgagactccctcagatcca
gtgataattgacagattcttcctgaagtttttccttaaatgcaaccaaaattgcctaaag
aatgcaggaaacccacgtgatatgcggagattccaggtcgtggtgtctaccacagtcaac
gtggatggccatgtcctggcagtctccgataacatgtttgtccacaataactccaagcat
gggcggagggctcggaggcttgacccctcggaaggtacgccttcttatctggaacatgca
gctactccctgtatcaaagccatcagcccgagtgaaggatggacgacgggaggcgcgact
gtgatcatcataggggacaatttctttgatgggttacaggtcatattcggtaccatgctg
gtctggagtgagttgataactcctcacgccatccgtgttcagacacctcctcggcacatc
cctggtgtggtggaagtcacactgtcgtacaagtccaagcagttctgcaaagggacacca
ggaagattcatctacacagcactcaatgaacccaccatcgactacggtttccagaggtta
cagaaggtcattccccggcatcctggtgacccagagcgcttgccgaaggaagtgatcctt
aaaagggctgcagatctggtcgaagccctgtatgggatgccccacaacaaccaggagatt
atcctgaagagagctgccgacattgcagaggctctgtacagtgtccctcgaaaccacaac
cagctcccagcccttgctaacacttcggtccatgcagggatgatgggtgtgaactccttc
agtggacaactggctgtgaatgtctccgaggcatcacaagccaccaatcaaggtttcacc
cgcaactcaagcagcgtgtcaccacatggctatgtgccgagcaccaccccacagcagacc
aactataactcagtcaccacaagcatgaacggctacggctctgccgccatgtccaatttg
ggtggctccccaaccttcctcaatggctcagctgccaactcaccctatgccattgtgcca
tccagccccaccatggcctcatctacgagcctcccctccaactgcagcagctcctccggc
atcttctccttctcaccagccaacatggtctccgcagtgaaacagaagagtgctttcgca
ccggttgtcagaccccagacttcccctcctcccacctgcaccagcaccaacgggaacagc
ctgcaagcgatatctggcatgattgtccctcccatgtga
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