Mus pahari (shrew mouse): 110331541
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Entry
110331541 CDS
T05929
Symbol
Ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mpah03009
]
110331541 (Ddx52)
Enzymes [BR:
mpah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110331541 (Ddx52)
Ribosome biogenesis [BR:
mpah03009
]
Eukaryotic type
90S particles
Helicases
110331541 (Ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110331541
NCBI-ProteinID:
XP_021067897
Ensembl:
MGP_PahariEiJ_G0018018
LinkDB
All DBs
Position
14:51593953..51617558
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AA seq
598 aa
AA seq
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MDSYDLFRRLGAGAKFDVKRFSADATRFQVGKRKFDSDSSEVLKGLDFFGNKKSVSDECA
ALQIHQEPRNEEKTEGGRLGRSKEPKKKKRKKMASEVPAQEDFDGTIQWTSSVEAKLEGE
KVSGEKKLTSGKLEHLRKEKVNFFRNKHKIHVQGTDLPDPIATFQQLDQEYKISPRLLQN
ILDAGFQVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALV
ISPTRELASQIHRELIKISEGTGFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYL
LKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSPKVRRAMFSATFAYD
VEQWCKLNLDNVVSVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFV
QSIERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFK
GVNLVINYDFPTSSVEYIHRIGRTGRAGNRGKAVTFFTEDDKPLLRSVANVIQQAGCPVP
EYIKGFQKLLSKQKKKMIKKPLERESISTTPKYFLEQAKQKKVADQNSKKKETLKEKS
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggattcctacgacctgtttcgccggcttggagccggcgccaagttcgacgtgaagcgg
ttctcagcagacgctactcgattccaggtaggaaaaagaaaattcgattctgactcttcg
gaggtcctgaagggactagacttcttcggaaacaagaagtccgtctcagatgaatgtgca
gcgttacagatacaccaggagccccgaaatgaggagaaaacggaagggggccggttggga
aggagtaaggagcccaagaagaaaaagagaaagaagatggcttcagaagttcctgctcaa
gaagactttgacggtactatccagtggacatcctctgtagaagcaaagcttgaaggtgaa
aaagtcagtggagagaagaagttaacttcaggaaagttggaacatctcagaaaggaaaag
gttaacttctttcggaacaaacacaagatacatgtccaaggaactgatcttcctgaccca
attgccacgtttcagcaacttgaccaagaatataaaatcagtcctagattgctccagaat
attctagacgcaggcttccaagtgcccacaccaattcagatgcaagccattccagttatg
ctgcatggtcgggaacttctggcttctgctccaactggatctgggaagacattggcattt
agcatccccattttaatgcagctgaaacaacccacaaataaaggctttagagccctggtt
atatccccaacccgagaacttgcaagccagattcacagagaattaattaaaatatctgag
ggtacaggattcaggatacatatgatccacaaagctgcaatagcagctaagaaatttgga
cctaaatcatctaagaagtttgatattcttgtgactactccaaatcgactgatctacttg
ttgaagcaggatccaccagggattgacctaacaagtgtcgagtggttggtagtagatgaa
tcagacaaactgtttgaagatggcaaaactgggtttagagaccagctggcttccattttc
ctggcctgcacatcgcccaaggtcagaagagcgatgttcagtgcaacttttgcatatgac
gttgagcagtggtgcaagctcaacctggacaacgtcgtttccgtgtccattggagcaagg
aattctgcagtcgaaactgttgaacaagagcttctctttgttggatctgagactgggaaa
cttctggccatgagagaacttgttaaaaagggtttcaatccacctgttcttgtttttgtt
cagtccattgaaagagctaaagaacttttccatgagctcatatatgaaggtattaatgtg
gacgtcattcatgcagaaagaacacagcagcagcgagataacacagtccacagcttcaga
gcaggaaaaatctgggttctcatttgtacagccttacttgcaagagggattgactttaaa
ggtgtaaacctggtcatcaattatgatttccccaccagctcagtggaatacatccatcgg
ataggtcgaactggaagagcagggaataggggaaaggccgttacatttttcactgaagat
gataaaccattactaagaagtgttgccaatgttatccagcaggctggttgtcctgtgccc
gaatacataaaaggtttccagaaactactaagcaaacaaaagaaaaaaatgattaagaag
ccactggaaagggagagcattagtacaactccaaagtacttcttagagcaagctaaacag
aagaaggttgctgaccaaaacagcaagaagaaagaaactctcaaagagaaaagttaa
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