Mus pahari (shrew mouse): 110331566
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Entry
110331566 CDS
T05929
Symbol
Helz
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110331566 (Helz)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
110331566 (Helz)
3'-5' decay
Other 3'-5' decay factors
110331566 (Helz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
AAA_19
AAA_30
UvrD-helicase
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
zf-CCCH_4
AAA_22
AAA_16
Bac_DnaA
AAA_7
AAA_5
SRP54
Motif
Other DBs
NCBI-GeneID:
110331566
NCBI-ProteinID:
XP_021067943
Ensembl:
MGP_PahariEiJ_G0018467
LinkDB
All DBs
Position
14:74874799..75020734
Genome browser
AA seq
1956 aa
AA seq
DB search
MEDRRAERSCEQACASLQRQDYDMALQHCTDALLSLGQYSMAEFTGPCPVEIERIKIESL
LYRIASFLQLKNYGQADEDCRHVLGEGMAKGERAFRAVLCCMQLKGKLQLVSSILAKSLS
GESLNGMVTKDLTRLKTLLTETETATSNVLSGCHVEDLDEGSCNGWHFRPPPRGVTSSEE
YTLCKRFLEQGICRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQSENKQLSGSYMETLI
EKWMSSLSPEKVLSECIEGVQVEHSPDLSVTVNTKKSHQTWTFALTCKPARMLYRVALLY
DAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKMAQNGLDHYVYKVGIAFNTEIFGT
FRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKRQLVTTAKRWDSSSKTIVDFEPNE
TTDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSRFNL
KVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTRVNAVYLLPVP
KEKLVQSQGTKEKVYEATIEEKTKDYVFLRISRECCEELSLRPDCDIQVELQFQLNRLPL
CEMHYALDRIKDNAVLFPDISMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQ
LPPVLIIGPYGTGKTFTLAQAAKHILQQQETSRILICTHSNSAADLYIKDYLHPYVEAGN
PQARPLRVYFRNRWVKTVHPVVHQYCLISSTHSTFQMPQKEDILKHRVVVVTLNTSQYLC
QLDLEPGFFTHVLLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFVYSEFARERN
LHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYP
LTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQ
VFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDS
SEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPVALCSIGRCRKFWERFIALCHENHSLHG
ITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRLQHSGNSSRQQHSPPKVKSLHHPQSD
HFQNDGIVQPNPSVLIGNPIRAYTPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVY
GGNVVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLHTHGRGSPIPYGLGHHPPV
SLGQPQNQHTEKDQQEQNRNGKTDTNNPGPEINKIRTPEKKPTEPKQVDLESNPQNRSPE
SRPGIYSNTKFPRKDNLNPRHINLPLPAPHAQYAIPSRHFHPLPQPPRPPFPISQPHTLL
NQQQNNLPEQPNQMVPQPNQVAPQPNQVAPQPNQVVPQQSQAPPQAPQPAPQLSPAFQAG
PTNAFFNNAVAHRPQSPAAEAVGPEQQPPPGLPDGHSPLRAITQPGPILASPLNNFVDES
SPGLPIEEALDRVHGSVALETLRQQQARLQQWSEHHAYLSQGGIPYSHHHHPHLPHLPQT
PIGLHQPPVRAEWKVAGRVDDETETTFSRFQDLLRELSHRDQGDTGELAEMPPPQSRLLQ
YRQVQPRSPPAVPTPPSSTDHSSHFANFNDSSRDIEVANSPAFPQRLPPQLFGSPFSLPS
EHLAPPPLKYLAPEGAWNFANLQQNHLIGPGFPYGLPPLPPRPPQNPFIRIQNHQHAVGQ
EPFHPLSSRTVSASSLPSLEEYEPRGPGRPLYQRRISSSSAQPCVEEASTPQDSLVQGKE
SQGHSNPPAFSFPAPESWANTTSSAPYQNIPCNGSSRASQPRELIAPPKTVKPPDDQLKP
ESGEVSSSFNYSMLQHLGQFPPLMPNKQIAESANSSSQQSPAGSKPAMSYASALRAPPKP
RPPPEQAKKGSDPLSLFQELSLGSSPGSNGFYSYFK
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagaagagctgaaaggtcatgtgaacaagcgtgcgcgtcattgcagaggcag
gactatgacatggccctccagcactgcacagacgccctgctctctcttggccagtactcc
atggcagagttcacaggaccgtgcccagtggagattgagcgcatcaaaatcgagagtctt
ctttacagaattgcctcattcttgcaattgaaaaactacgggcaagctgatgaagattgt
aggcatgtgctgggggaaggaatggccaagggagagcgtgccttccgggcagtgctgtgc
tgcatgcagctgaaagggaagctccagcttgtgtcctccatccttgccaagtcactgtca
ggggagtctctgaatgggatggtaacgaaagatttgacaagactcaagacacttctcaca
gaaacagagacagcaacgagtaatgtcctgtctggatgtcacgtggaagacttagatgaa
gggtcttgtaatggttggcatttccgcccaccgcccaggggggtcaccagcagcgaggag
tacaccttgtgtaaaaggtttttagagcaagggatctgtaggtacggtgcccagtgtact
tcagcacattcccaggaagaactagcagaatggcagaaaagatacgcctcccgactgatc
aaactgaagcagcaaagtgagaataaacagctctcaggcagctacatggagaccttgata
gagaagtggatgagctcactgtctcctgagaaagtgcttagcgaatgcatagagggagtt
caagtggagcacagccctgacctgtcggtcaccgtcaacaccaaaaaatcccatcagacg
tggacctttgctctgacctgtaagcctgcaagaatgctgtatcgggtagccttgctttat
gacgctcatcgtcctcatttcagtatcattgccatatctgccggagatagtactacccag
gtatcacaagaagtccccgagaactgtcaagaatggataggaggaaagatggcccaaaat
ggattagatcattatgtgtataaagtcgggatagcatttaacacagaaatatttggaact
tttcgccaaaccatagttttcgactttggattggagccagtactcatgcaaagagtaatg
attgatgcagcttctacagaagatcttgaatacctgatgcatgcaaagcggcagctggta
accacagccaagcgctgggactcttcttctaagactattgtagattttgaacctaatgaa
actactgatttggagaagagccttttgatcagataccaaattcctctttccgctgaccag
ctgtttacacagtccgttttagacaaatcgttgaccaagactaactatcagtcacggctg
cacgacctgctttatattgaggagatagcccagtataaagaagtcagcaggttcaacctt
aaagtgcaattgcagattttagcaagcttcatgctcactggagtttctgggggtgcaaag
tatgctcagaatggacaactttttggtcgtttcaagcttactgaaaccctgtctgaagat
actttggctggacggctggtgatgaccagggtcaacgctgtttatttattaccagtccct
aaagagaagcttgtccagtcccagggaaccaaagagaaggtctatgaagctactattgaa
gaaaaaacaaaagactatgtatttttaaggatatccagggaatgctgtgaagagcttagt
ctgcggcctgactgtgacatccaggttgagcttcagtttcagttgaaccgattacccctc
tgtgaaatgcattatgcactagacaggattaaggacaatgctgttttgtttccagacatc
agtatgactcctaccataccttggagtcccaacagacagtgggacgagcagttggatcct
cgactaaatgcaaaacagaaagaagctgttctggccatcaccactccactctccatccag
ctgcctcctgtcctcatcatcggaccctacgggacaggcaagaccttcactctggctcag
gccgccaagcacatactgcagcagcaggagaccagcaggattctcatttgcacccattct
aatagtgctgctgacctctacataaaggattatttacatccatatgtagaagcaggcaat
ccccaggcaagacctctcagggtgtatttccggaatcgctgggtgaagactgtccaccca
gtcgtgcatcagtactgtttgatttcaagcacacactccacctttcagatgccccagaag
gaagatattcttaaacatcgagtggtggtggtcaccctgaacacttcccagtacctctgc
cagctggacctggaacctggcttcttcacgcacgttctgttagatgaagctgctcaggcc
atggagtgtgagaccattatgcctctagccttagctactaagaacacacggattgttttg
gctggtgatcacatgcagctcagtccttttgtttacagtgagtttgccagggagagaaac
cttcatgtttcgttacttgaccgactctacgagcattaccctgccgagtttccatgcagg
atcctcctctgtgagaactatcgttcccatgaagctatcatcaactacacctctgagctt
ttctatgaggggaagctgatggccagtgggaagcagccagcgcacaaggacttctatcca
ctcacgttctttacggcgcggggggaggacgtccaagagaagaacagcacggcattctac
aacaatgcagaggtatttgaagtggtggagcgtgtagaagagctaagacggaagtggcca
gtggcatggggaaagttagatgacggcagcatcggtgtggtgacgccatacgctgaccag
gtgtttagaatacgagctgagcttcggaagaagaggctctcggatgtgaacgtggaaagg
gtgctcaatgttcaaggaaagcagttcagagttctgtttcttagcacagtgcgtacacgc
cacacttgcaagcacaagcagacaccaattaaaaagaaagagcagcttctggaagactcc
tccgaggacttagactatggctttctgtccaactacaaacttctcaatacggccatcacc
agagcacagtccttggttgctgtggtgggcgacccagttgctctgtgctctattggaagg
tgcagaaagttttgggagcggtttattgccctgtgtcatgaaaaccacagcttgcacggg
atcacgttcgaacagatcaaggcacagttagaggctttagaactcaagaagacttacgtg
ttgaatccgctggctcctgagttcatcccccgggctttacgactgcagcattcaggaaac
agtagccgacagcagcactcaccacccaaggtgaaaagcctccatcatccccagagtgat
catttccagaatgatggaattgttcagcccaatccttccgtccttattggcaatcctatt
agagcatatactcctccgccccctcttggaccacacccaaacttggggaaatctccaagc
cccgttcaaagaatagatcctcacactgggacaagtattctttacgtacctgctgtctac
ggagggaatgtagttatgtcggtgcctttacctgtgccatggacagggtaccagggtagg
tttgcagttgaccctcgtattattacacaccaggcagcaatggcctacaatatgaaccta
ttacacacacatggacgtgggtcgccgatcccttatggtcttggacatcacccacctgtc
agcctaggccagccacagaatcagcacacagagaaggatcagcaggagcaaaaccgaaat
ggtaaaactgatacaaataaccctggacctgaaattaataagatccgaacaccagagaag
aaacctacagagcccaaacaggttgatttggaatcaaatccacagaacagaagtcctgaa
tcccgtcctgggatttattccaacactaaatttcctcgaaaagataatctcaacccaaga
catataaaccttcctcttcctgcgccacacgcccagtatgcaatccctagccgccatttc
cacccgctgcctcagccgcccaggccgccttttcccatttcccagccgcacaccttgtta
aatcagcaacagaataatttgcctgaacaaccaaatcagatggtacctcagccaaatcag
gtggcaccccagccaaatcaggtggcaccccagccaaatcaggtggtcccgcagcagagc
caggcacctccacaggccccacagccagcacctcagctctctcctgcatttcaggcgggg
cccaccaatgcatttttcaataatgcagttgctcaccgaccacagtctcctgctgcagag
gctgtgggtcctgagcagcagccgcctcctgggctgcccgacggccacagtccactgaga
gccatcacacagcctggccccatcctggcatcacctttgaacaactttgttgatgagagc
tctccaggattgcctatagaggaagctttggatcgagtgcatggaagtgtagctctggag
acgctgaggcagcagcaggcgcgactgcagcagtggagtgagcaccacgcctacctgagc
cagggcggtatcccgtattcacaccatcaccaccctcacctcccgcatcttccccagaca
cccattggcctccaccagccaccagtgagggcagagtggaaagtcgccggcagggttgac
gatgaaacagagacaacattctcaaggtttcaagacttactcagagagctgtcccatcgg
gatcaaggtgacactggagaactagctgaaatgccaccacctcagtcaagactcctacag
tacagacaagttcagcctagaagcccaccagcggtcccgactcccccttcctccacagac
cacagtagccactttgctaactttaatgacagcagcagagacatcgaagtagccaacagc
ccagcattcccgcagcgcctcccacctcagctattcggttcccctttctcgttgccatct
gaacaccttgcccctcctcctctgaaatacctggctccggaaggagcatggaattttgct
aacttgcagcagaatcacttaatagggccgggctttccctatggcctacctccattgccc
cccaggccaccgcagaacccttttatacgcatccagaaccatcaacatgctgttggtcaa
gagccatttcacccactgtcatctcgcacagtgtctgcttcttcgctccccagcctagaa
gagtatgagcctagaggacctggtcggcccttgtaccaaagaagaatctcatctagctca
gcccagccttgtgtagaagaggcaagcactccccaagacagcctggttcagggcaaagag
tcgcagggccacagcaacccacctgccttcagcttcccggcccccgagtcctgggccaac
accacctcatctgccccctaccagaacattccgtgcaatggatccagcagggcgagtcag
cccagagagttgatagctccccccaagactgtcaaaccccctgacgatcagctgaagccc
gagagcggggaggtgtccagttccttcaactactcgatgctgcagcacctcggccagttc
ccacccctcatgcccaacaagcagatcgctgagtccgccaacagcagcagccagcagagc
ccggcagggagcaagcccgccatgtcctacgccagtgcgctgcgggccccgcccaagccc
aggccgccgcccgagcaggccaagaagggcagcgacccgctgtccctgttccaggagctc
agtctgggcagcagcccgggcagcaatggcttctactcctacttcaagtga
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integrated database retrieval system
