KEGG   Mus pahari (shrew mouse): 110331650
Entry
110331650         CDS       T05929                                 
Symbol
Per1
Name
(RefSeq) period circadian protein homolog 1 isoform X1
  KO
K21944  period circadian protein 1
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04710  Circadian rhythm
mpah04713  Circadian entrainment
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    110331650 (Per1)
   04713 Circadian entrainment
    110331650 (Per1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mpah03400]
    110331650 (Per1)
DNA repair and recombination proteins [BR:mpah03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    110331650 (Per1)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 110331650
NCBI-ProteinID: XP_021068088
Ensembl: MGP_PahariEiJ_G0017685
LinkDB
Position
14:36943546..36958361
AA seq 1292 aa
MSGPLEGADGGGDPRPGEPFCPGGVPSPGAPQHRPCPGPSLADDTDANSNGSSGNESNGH
ESRGASQRSSHSSSSGNGKDSALLETTESSKSTNSQSPSPPSSSIAYSLLSASSEQDNPS
TSGCSSEQSARARTQKELMTALRELKLRLPPERRGKGRSGTLATLQYALACVKQVQANQE
YYQQWSLEEGEPCAMDMSTYTLEELEHITSEYTLRNQDTFSVAVSFLTGRIVYISEQAGV
LLRCKRDVFRGARFSELLAPQDVGVFYGSTTPSRLPTWGTGTSAGSGLQDFTQEKSVFCR
IRGGPDRDPGPRYQPFRLTPYVTKIRVSDGAPAQPCCLLIAERIHSGYEAPRIPPDKRIF
TTRHTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPF
DHSPIRFCARNGEYVTMDTSWAGFVHPWSRKVAFVLGRHKVRTAPLNEDVFTPPAPSPAP
SLDSDIQELSEQIHRLLLQPVHSSSPTGLCGVGPLMSPGPLHSPGSSSDSNGGDAEGPGP
PAPVTFQQICKDVHLVKHQGQQLFIESRAKPPPRPRLLATGTFKAKVLPCQSPNPELEVA
PVPDQASLALAPEEPERKEASGCSYQQINCLDSILRYLESCNIPSTTKRKCASSSSYTAS
SASDDDKQRTGPVPVGAKKDPSSAVLSGEGATPRKEPVVGGTLSPLALANKAESVVSVTS
QCSFSSTIVHVGDKKPPESDIIMMEDLPGLAPGPAPSPAPSPTVAPDPTPDAYRPVGLTK
AVLSLHTQKEEQAFLNRFRDLGRLRGLDTSSVAPSAPGCHHGPIPPGRRHHCRSKAKRSR
HHQTPRPETPCYVSHPSPVPSSGPWPPPPATTPFPAVVQPYPLPVFSPRGGPQPLPPAPT
SVSPATFPSPLVTPMVALVLPNYLFPTPPSYPYGVSQAPVEGPPTPASHSPSPSLPPPPP
SPPHRPDSPLFNSRCSSPLQLNLLQLEEPPRTEGGAATGGPGSSAGPLPPSEETAEPEAR
LVEVTESSNQDALSGSSDLLELLLQEDSRSGTGSAASGSLGSGLGSGSGSGSHEGGSTSA
SITRSSQSSHTSKYFGSIDSSEAEAGAAQARAEPGDQVIKYVLQDPIWLLMANADQHVMM
TYQVPSRDAASVLKQDRERLRAMQKQQPRFSEDQRRELGAVHSWVRKGQLPRALDVTACV
DCGSSVQDPGHSDDPLFSELDGLGLEPMEEGGGEGGGGGGGSGGGGGRDGGEEAQTQVGA
KGSSSQDSAMEEEEQGGSSSSPALPAEENGAS
NT seq 3879 nt   +upstreamnt  +downstreamnt
atgagtggtcccctagaaggggccgatgggggaggagaccccaggcccggagaacctttt
tgtcctggaggagtcccatcccctggggccccgcagcaccggccttgcccaggccccagc
ctggctgatgacactgatgcaaacagcaatggctcaagtggcaatgaatccaatggacac
gagtccaggggtgcatctcagcggagttctcatagctcctcttctggcaatggcaaggac
tcagctctgctggagaccactgagagcagcaagagtacaaactcacagagcccatcccca
cccagcagctccattgcctacagcctcctgagtgcgagctcagagcaggacaacccatct
accagtggctgcagcagtgaacagtcagctcgagccaggacccagaaagaactcatgacc
gcacttcgggagctcaaacttcggctgccaccagagcgtcggggcaagggtcgctctggg
accctggccactctgcagtacgcgctggcctgtgtcaagcaggtgcaggctaaccaggaa
tattaccagcagtggagtctggaggagggtgagccttgtgccatggacatgtctacttac
accctggaggagttggagcatatcacatccgaatacacacttcgaaaccaggacaccttc
tctgtggctgtgtccttcctgacaggccggattgtgtatatttcggagcaggcaggtgtc
ctgttgcgctgcaaacgggatgtgtttcggggtgcccgcttctcagagctcctggctccc
caggatgtgggtgtcttctatggctctaccacaccatctcgactgcccacctggggcact
ggcacctctgcaggttcaggcctccaggacttcacccaagagaagtccgtcttctgccga
atcagaggaggtcctgaccgggatccagggccccggtaccagccattccgcctaacccca
tatgtgaccaagattcgggtctcagatggggcccctgcacagccgtgctgcctactcatt
gcagagcgcatccactctggttatgaagctccccggatccctcctgacaagaggatcttc
accacacgacacacaccaagctgcctcttccaggatgtagatgaaagggctgccccactg
ctgggttaccttccccaggatctcctgggggctccggtacttctctttctacatcctgag
gaccgacccctcatgctggccattcataagaagatactgcagctggcaggccagcccttt
gaccattcccctattcgcttctgtgctcggaacggggaatatgtcaccatggacaccagc
tgggccggctttgtgcacccctggagccgcaaggtggctttcgtgttgggccgccataaa
gtgcgcacggcacccctgaatgaggacgtgttcactcccccagcccccagcccggctccg
tccctggactctgatatccaggagctctcagagcagatccatcgattgctgctgcagcct
gtgcacagctccagccccacagggctctgtggagttggccctctgatgtcccctggtcct
ctacacagccctggctcctccagtgatagcaatggcggtgacgctgaggggcccgggcct
cctgctccagtgactttccagcagatctgtaaggacgtgcacctggtaaagcaccaggga
caacagctcttcattgagtctcgggccaagcctccaccccggccccgcctccttgctaca
ggtacattcaaagccaaagtcctcccctgccagtccccaaaccccgaactggaggtggcc
cctgttcctgaccaagcctcattagcattggcccctgaggagccagagaggaaggaagcc
tctggctgttcctaccagcagatcaactgcctggacagcatcctcaggtatttggagagc
tgcaacatccccagtacaaccaagcgtaaatgtgcctcctcctcctcctacactgcctct
tcggcctctgacgacgacaagcagaggacgggtccagttcctgtgggggccaagaaagat
ccgtcgtcagcagtgctgtctggggagggggcaactcctcggaaggagccagtggtggga
ggcaccctgagcccgctcgccctggccaataaggcagagagcgtggtgtccgtcaccagt
cagtgtagcttcagctctaccatcgtccatgtgggagacaagaagcccccggagtcggac
atcatcatgatggaagacctgcctggcctggcccctggcccagcccccagtccggccccc
agccccacagtagcccctgacccaaccccagatgcttatcgcccagtgggtctgaccaag
gccgtgctgtccctgcacacacagaaggaagagcaagccttcctcaaccgcttcagagat
cttggcaggcttcgtggacttgacacctcttctgtggccccctcagcccctggctgccac
catggccccattccccctggtcgccgacaccactgccgatctaaagcaaagcgttcccgc
caccaccagaccccccggcctgaaactccctgctatgtctcccatccttcacctgtgccc
tcttctggaccctggccacccccaccagccactacccccttcccagcagtggtccagccc
tacccactcccagtattctcccctcgaggaggaccccagccgcttccccctgcccctaca
tctgtgtcccctgctaccttcccttctcctttagtgaccccaatggtggccttggtgctc
cctaactatctattccctaccccacctagttatccatatggggtgtcccaggcccctgtt
gagggaccacccacgcctgcttcccactcgccctctccatcactgcccccaccacctccc
agccccccccaccgcccagactccccactgttcaactcaagatgcagctccccactccag
cttaatctgctgcagcttgaggagcccccccgcacggaggggggtgctgccacaggaggc
cccggaagcagtgccgggcccctgcctcccagtgaggagactgctgagccagaggccaga
ttggtggaggttaccgagtcgtccaatcaggatgcactttcaggctccagcgacctgctg
gagctactgctacaagaagactctcgctcgggcacaggctccgcagcctcaggctccctg
ggctctggcctgggctctgggtctggttcgggatcccacgaagggggaagcacctcagcc
agcatcacccgcagcagtcagagcagccatacaagcaaatacttcggcagcatcgactct
tcggaggctgaagctggggctgctcaggccagggctgagcctggggaccaggtgattaag
tatgtgctccaggaccccatctggctgctcatggccaacgctgaccagcacgtcatgatg
acataccaggtgccgtccagggatgcagcctctgtgctgaagcaagaccgggagaggctc
cgggccatgcagaaacagcagccacggttctcagaggaccagaggcgggaactgggtgct
gtgcactcctgggtccggaaaggccagctgcctcgggcccttgatgtgacggcttgtgtg
gactgcggtagcagcgttcaagatcctggccactctgatgacccactcttctctgaactg
gatggattagggctggagcccatggaagagggtggaggcgagggtggagggggtggtggt
ggcagcggtgggggtggtgggcgtgatggtggtgaggaggcccagacccaggttggggct
aagggttcaagctctcaggactctgccatggaggaagaagagcaaggtgggagctcatcc
agtccagctttacctgcagaagaaaatggcgccagctag

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