Mus pahari (shrew mouse): 110331712
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Entry
110331712 CDS
T05929
Symbol
Slc6a4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04082
Neuroactive ligand signaling
mpah04721
Synaptic vesicle cycle
mpah04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
110331712 (Slc6a4)
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
110331712 (Slc6a4)
04721 Synaptic vesicle cycle
110331712 (Slc6a4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mpah02000
]
110331712 (Slc6a4)
Transporters [BR:
mpah02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
110331712 (Slc6a4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
110331712
NCBI-ProteinID:
XP_021068195
Ensembl:
MGP_PahariEiJ_G0017905
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All DBs
Position
14:44723250..44757118
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AA seq
630 aa
AA seq
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METTPLNSQKVLSECKDKEDCQENGVLQKGVPTPADRAEPGQISNGYSAVPSTSAGDEVP
HSVPAATTTLVAEIHQVERETWGKKMDFLLSVIGYAVDLGNIWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTII
AWALYYLISSFTDQLPWTSCKNSWNTGNCTNYFAQDNITWTHHSTSPAEEFYLRHVLQIH
QSKGLQDLGTVSWQLALCIMLIFTIIYFSIWKGVKTSGKVVWVTATFPYIVLSVLLVRGA
TLPGAWRGVVFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKRREWFVLIVVITCILGSLLT
LTSGGAYVVTLLEEYATGPAVLTVALIEVVVVSWFYGIAQFCSDVKEMLGFSPGWFWRIC
WVAISPLFLLFIICSFLMSPPQLRLFQYNYPHWSIILGYCIGTSSVICIPIYIIYRLIST
PGTLKERIIKSITPETPTEIPCGDIRMNAV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacacccttgaattctcagaaagtgctgtcagagtgtaaggacaaagaggac
tgccaagaaaatggtgttctgcagaagggtgtccccacgccagcggacagggcagagcct
ggccaaatatccaacgggtactctgcagttcccagcacaagcgctggggatgaagtgcca
cactctgtgccagctgccaccaccaccctggtagctgagattcaccaagtggaacgggag
acctggggcaagaagatggatttcctcctgtctgtcattggctatgctgtggacctgggc
aacatctggcgttttccctacatctgctaccagaatggcggaggggccttcctcctccca
tataccatcatggccatcttcggggggatccccctcttttacatggagctcgcactgggc
cagtaccaccgaaatgggtgcatttctatatggaggaagatctgcccgattttcaaaggc
attggctatgccatctgcatcattgccttttatatcgcctcctactataacaccatcata
gcctgggcactctactacctcatctcctccttcacggaccagctgccctggaccagttgc
aagaactcttggaacactggcaactgcaccaactacttcgcccaggacaacatcacgtgg
acacaccattccacgtcacctgctgaggagttttacttgcgccatgtcctgcagatccac
cagtctaagggactccaggacctggggaccgtcagctggcagttggctctctgcatcatg
ctcatcttcaccattatctacttcagcatctggaaaggagtcaaaacatctggcaaggtg
gtgtgggtgacagccaccttcccttacattgtcctttctgtcctgctggtgaggggagcc
acccttcctggagcctggagaggggttgtcttctacttgaaacccaactggcagaaactc
ttggagacaggggtgtgggtagatgctgcagctcagatcttcttctctcttggtccgggg
tttggggttctcctggcttttgctagctacaacaagttcaacaacaactgttaccaagac
gccctggtgaccagtgtggtgaactgcatgacgagcttcgtctctggctttgtcatcttc
acggtgcttggctacatggctgagatgaggaacgaagatgtgtccgaggtggccaaagac
gcgggccccagcctccttttcatcacatatgcagaggcaatagctaacatgccagcatcc
acattctttgccatcatcttcttcctcatgttaatcacgctgggtttggatagcacgttc
gcaggcctggaaggtgtgatcacagctgtgctggatgagtttccccacatctgggccaag
cgcagggagtggtttgtgctcatcgtggtcatcacttgcatcttgggatccctgctcaca
ctgacatcaggaggggcgtacgtggtgaccctgctggaggagtacgccacgggaccagca
gtgctcaccgtggctctcatcgaggttgtcgtcgtgtcttggttctatggaatcgctcag
ttctgcagcgacgtgaaggaaatgctgggcttcagcccgggatggttttggaggatctgc
tgggtggccatcagccctctgtttctcctgttcatcatttgcagttttttgatgagccca
ccccaactccggcttttccaatacaattatccccactggagtatcatcttgggctactgc
ataggaacatcgtctgtcatctgcatccctatatacatcatttatcggctgatcagcact
ccagggacacttaaggagcgcattattaaaagtatcactcctgaaacaccaacggaaatt
ccgtgtggggacatccgcatgaatgctgtgtaa
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