Mus pahari (shrew mouse): 110331725
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Entry
110331725 CDS
T05929
Symbol
Rai1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110331725 (Rai1)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
110331725 (Rai1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
110331725
NCBI-ProteinID:
XP_021068218
Ensembl:
MGP_PahariEiJ_G0017580
LinkDB
All DBs
Position
14:28149972..28246448
Genome browser
AA seq
1888 aa
AA seq
DB search
MQSFRERCGFHGKQQNYPQTSQETSRLENYRQPGQAGLSCDRQRLLTKDYYSPQPYTGYE
GGTGTPSSTVATAAADKYRGSKPLQGRPAFPSYVQDSSPYPGRYSGEEGLQTWGGPQPPP
PQPQPLPGAVNKYEENLMKKTVVPPNRQYPEQGPQLPFRTHGLHVPPPQPQQPLAYPKLQ
RQKPQNDLASPLPFPQGSHFPQHSQSFPTSSTYAPTVQGGGQGAHSYKSCTAPSAQPHDR
PMSANASLAPGQRVQNLHAYQPGRLGYEQQQQALQGRHHTQETLHYQNLAKYQQYGQQGQ
GYCPPDTAVRAPEQYYQTFSPSSSHSPARSVGRSPSYSSTPSPLMPNLENFPYSQQPLST
GAFPTGITDHSHFMPLLNPSPTDAASSVDPQVSNCKPLQKEKLPDNLLSDLSLQSLTALT
SQVENISNTVQQLLLSKATMPQKKGVKNLVSRTPEQHRSQHCSPEGSGYSAEPAGTPLSE
PPSSTPQSTHAEPQDTDYLSGSEDPLERSFLYCSQARGSPARVNSNSKAKPESVSTCSVT
SPDDMSTKSDDSFQSLHSTLPLDSFSKFVAGERDCPRLLLSALAQEDLASEILGLQEAIV
EKADKAWAEAPSLPKDNGKPPFSLENHGSCLDTVAKTSWSQPGEPETLPESLQLDKGGST
KDFSPGLFEDPSVAFATADPKKTSSPLSFGTKPLLGTATPDPTTAAFDCFPDTPTASSVD
GANPFAWPEENLGDACPRWGLHPGELTKGLEQGAKASDSVGKADAHEPSACMGFQEDHAI
GKPAAALSGDFKQQEAEGVKEEVGGLLQCPEVGKADQWLEESRHCCSSTDFGDLPLLPPP
GRKEDLEAEEEYSSLCELLGSPEQRPSLQDPLSPKAPLMCTKEEAEEALDTKAGWVSPCH
LSGEPAVLLGPSVGAQSKVQSWFESSLSHMKPGEEGREMERAPGSSGTSQGSLAPKPNKP
AVPEGPIAKKEPVPRGKSLRSRRVHRGLPEAEDSPCRVPALPKDLLLPESCTGPPQGQAE
GAGAPGRGLSEGLPRMCTRSLTALSEPQTPGPPGLTTTPTPPDKLGGKQRAAFKSGKRVG
KPSPKAASSPSNPAALPVASDSSPMGSKTKEPDSPGMPGKDQRSMVLRSRTKPQQVFHAK
RRRPSESRIPDCRATKKLPANNHLPTAFKVASGPQKEGRMSQRVKVPKPGTGSKLSDRPL
HTLKRKSAFMAPVPAKKRSLILRSNNGSGGDGREERAESSPGLLRRMASPQRSRPRGSGE
PPPPPPLEPPAACVGLATQSSLPSAVRTKVLPPRKGRGLKLEAIVQKITSPGLKKLACRV
AGAPPGTPRSPALPERRSGGSPAGAEEGLGGMGQMLPAASGADPLCRNPASRSLKGKLLN
SKKLSSAADCPKAEAFVSPETLPSLGTARAPKKRSRKGRTGALGPSKGPLEKRPCPGQPL
LLAPHDRASSTQGGGEDNSSGGGKKPKTEELGPASQPPEGRPCQPQTRAQKQPGQASYSS
YSKRKRLSRGRGKTAHASPCKGRATRRRQQQVLPLDPAEPEIRLKYISSCKRLRADSRTP
AFSPFVRVEKRDAYTTICTVVNSPGDEPKPHWKPSSSAAASSSTSSSSLEPAGASLTTFP
GGSVLQQRPSLPLSSTMHLGPVVSKALSTSCLVCCLCQNPANFKDLGDLCGPYYPEHCLP
KKKPKLKEKARLESTLEEASLPLERTLKGLECSASTTAAAPTTTTITTPTTLGRLSRPDG
PADPAKQGSLRTSARGLSRRLQSCYCCDGQGDGGEEVAPADKSRKHECSKEAPTEPGGDT
QEHWVHEACAVWTSGVYLVAGKLFGLQEAMKVAVDMPCTSCHEPGATISCSYKGCIHTYH
YPCANDTGCTFIEENFTLKCPKHKRLPL
NT seq
5667 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttttcgagaaaggtgtggtttccatggcaaacagcaaaactacccacagacc
tcccaggagacatcgcgcctggagaactacaggcagccaggtcaggctggactgagctgt
gatcgtcagcggctgctgaccaaggactactacagccctcagccctatacaggctatgag
ggtggcactggtacaccttccagcacggtggccacggcagcagcagacaagtaccgaggc
agcaaacccctgcaggggaggccggctttccccagctatgttcaagacagcagcccctac
ccagggcgctactctggcgaggaaggtcttcagacctgggggggcccacagccaccaccc
cctcagccacagcctctgccaggggcagtgaacaaatacgaggagaacctgatgaagaag
acggtagtgcctccaaacaggcagtaccctgagcagggcccccaacttcccttccggact
cacggcctgcatgtgccaccaccgcagcctcagcagcccctggcttaccccaaactccaa
aggcagaaaccacagaatgatcttgcctcccctctgcccttcccccagggcagccacttt
ccccagcattcccagtccttccctacctcctccacttatgccccaacagtgcagggtggt
gggcagggggcccactcctacaagagctgcacagcaccatctgcccagcctcatgacagg
ccgatgagtgccaatgcgagcctggctccagggcaacgggtccagaatcttcacgcttac
cagccgggccgccttggctatgagcagcagcagcaagcacttcaaggccggcaccacacc
caggaaacactccactaccagaacctcgccaagtaccaacagtacggacagcagggccag
ggctactgtccgccggacacagctgtcagggctccagaacagtattaccagactttcagc
ccgagctccagccactcccctgcacggtctgtgggtcgctccccttcctatagctccacc
ccatcaccactgatgcccaatctggagaacttcccctatagccagcagccacttagtact
ggggccttccccacaggcatcacagaccacagccactttatgcctctgcttaacccatcc
ccaacagatgctgccagttctgtggacccccaggtcagcaactgcaagcccctgcaaaag
gagaagctccccgacaacttgctttcagatctcagcctgcagagcctcacagcgctcacc
tcacaggtggaaaacatctccaacactgtgcagcagctcttgctgtccaaagctacaatg
ccacagaagaaaggggtcaagaaccttgtgtctaggactccagagcagcacagaagccag
cactgtagccccgagggcagtggctactcagcggagccagcgggcacaccactgtctgag
ccgccgagcagcacgccacagtccacccatgctgagccccaggacaccgactacctgagt
ggctctgaggacccgctagagcgcagcttcctctactgcagccaggcccggggcagcccc
gccagggtcaacagcaactccaaggctaagcctgagtctgtgtccacctgttctgtgacc
tcacccgatgacatgtccaccaagtccgacgactctttccagagcctgcacagtactctg
ccactggacagcttctccaaatttgtggcaggtgagcgggactgcccgcggctgctgctc
agtgccctggcacaggaagacctggcctccgagatcctgggactgcaggaagccattgtt
gagaaggctgacaaggcctgggccgaggctcccagcctgcccaaggacaatggcaagcca
cccttctcactggagaaccatggctcctgcctggacactgtggccaagacttcgtggtca
cagccaggggagccggagaccctccctgagtccttgcagctggacaagggtggcagcacc
aaggacttcagcccagggctgtttgaagacccatctgtggcctttgccaccgccgacccg
aagaaaacaagcagccccctgtccttcggcaccaagcctttgcttgggactgccactcct
gaccccaccacagcagcgtttgactgctttccagatacacccactgccagctcggtggat
ggtgccaacccctttgcctggccagaggagaacctgggcgatgcttgtcctcgttggggc
ctccaccctggtgagcttaccaagggcttggaacagggtgcaaaagcctcggacagcgtg
ggcaaggcggatgcacacgagccctctgcctgcatgggcttccaggaggatcatgccatc
gggaagcctgcagccgcactgtctggggacttcaaacagcaggaggcagagggggtgaaa
gaggaagtgggcgggttgctgcagtgccccgaggtgggcaaggcggaccagtggctagag
gagagccgccattgctgttcctccactgacttcggggacctgccactgttgccgccccct
ggcaggaaggaggacctggaagctgaagaggagtactcttccctgtgtgaactgctgggg
agccctgagcagaggcccagcctgcaggacccgttgtccccaaaggccccactcatgtgc
accaaggaggaggcggaggaggcactggacaccaaggctggctgggtctctccatgtcac
ctctctggggagcctgctgtcctactgggcccctctgtgggtgcccaatcaaaggttcag
agctggtttgaatcttctctgtcacacatgaaaccgggagaagaagggcgggagatggag
agggctccaggtagttctggcacttcgcaaggctccttggccccgaagcctaacaagcct
gcggtacctgaggggcccattgctaagaaagagcctgtgccacggggtaagagcttacgg
agccggcgagtacaccgggggctgcccgaggctgaagactctccgtgcagggtgccggcg
cttcccaaagacctcttgctcccagagtcttgcacggggcccccacagggacaggcagag
ggggctggagccccaggccgggggctgtcagaagggctccccagaatgtgtacccgctcg
cttacagctctgagtgaaccccaaactcctgggcctccgggcctgaccaccacccccacg
cctcctgacaaactgggaggtaagcagcgagctgccttcaagtctggcaagcgggttggg
aaaccgtcacccaaggctgcgtccagccccagcaaccctgctgccctgcctgttgcctca
gacagcagccccatgggctccaaaaccaaggagccagactctcccggcatgcctggcaag
gaccagcggtccatggtcctccggtctcgcaccaaaccccagcaggtcttccatgccaaa
cggcggcggccctcggagagccgaatcccagactgtcgcgccaccaagaagctccctgct
aacaaccatttacccactgcattcaaggtcgccagtggaccccagaaggaaggtcggatg
agccagcgggtcaaagtacccaaacccggtacaggaagcaagctttcagatcggcctctt
cacacactcaagaggaagtcggctttcatggcacctgtccccgccaaaaagcggagcctc
atcctgagaagcaacaatggcagtgggggagatgggagggaggagagggccgagagttcc
cctggcctcttacggaggatggcctcaccccagaggtccagacccaggggcagtggggag
ccacccccacccccacccttggagccacctgctgcatgcgtggggttggctacacaatca
tccttgcccagtgctgtgaggaccaaggtgctgccgccccgcaagggccgcggcctcaag
ctggaggccatagtacagaagatcacctcacctggtctcaagaaacttgcatgcagagtg
gcaggggcccctcctgggacaccccggagcccagccctacctgagagacgttcagggggc
agtccagctggggcggaagagggtttaggaggaatggggcaaatgctaccagcagcttcc
ggagctgacccattgtgcagaaacccagccagcaggtccctaaaaggtaaactcttgaac
agtaagaagctgtcctctgctgctgactgccccaaagctgaggccttcgtgtccccggag
accctgccatcactagggactgctcgggcaccgaagaaaaggagccggaaaggcaggact
ggggccttgggaccctccaaaggtccgttggagaagcggccctgtccgggccagcctctg
ctcctcgctccccacgacagggccagcagcactcagggcggaggtgaggacaactccagt
ggaggaggcaagaagccaaagacagaggagctgggaccggcctcccagccccctgaaggc
cggccctgccagccccagacgagggcgcagaagcagcctggccaagccagctacagcagc
tattccaagcggaagcgcctcagccgtggccgggggaagaccgcccacgcttcaccctgt
aagggacgtgccactcggagaaggcagcagcaggtactgcccctggatcctgcagagcct
gaaatccgactcaaatacatttcctcttgcaagaggctgcgggcagacagccgcacccca
gccttctcgccctttgtgagggtggagaagcgagatgcgtacaccaccatatgcactgtt
gtcaactctccgggggatgagccgaagcctcactggaagccatcctcctctgctgctgcc
tcctcctccacctcctcctcctccttagaaccagctggggcttctctgaccacattccct
ggaggctctgtgctgcagcagaggccctccctgcccctctcctccaccatgcatctgggg
cctgtggtgtccaaggccctaagtacctcttgccttgtctgctgcctctgccaaaacccg
gccaatttcaaggaccttggggacctctgtggcccctactaccctgaacactgcctccca
aaaaagaagccaaaactcaaggagaaggcgcggctggagagcaccttggaggaggcctct
ctgcctcttgagagaacactcaaaggcctggaatgttcagccagcaccacggctgccgcc
cctaccacaaccaccatcactacccccacgaccctggggagactgtcgaggcctgacggc
ccagctgaccctgccaagcagggctccctgcgcaccagtgcccggggcctgtcacggcgg
ctgcagagttgttattgctgtgacggtcagggggatgggggtgaggaggtggccccagct
gacaagagccgcaaacatgaatgcagcaaagaggcccctacagaacctggtggggacacc
caggaacactgggtgcatgaggcctgtgctgtgtggaccagcggggtgtacctggtggcc
gggaagctctttgggctgcaggaggccatgaaggtagctgtggacatgccgtgtaccagc
tgtcacgagcccggggcgaccatctcgtgctcctataaaggatgtatccacacctaccac
tacccatgtgccaatgacacaggttgcacgttcattgaggagaattttactttgaagtgc
cccaaacataagaggctgccgttgtaa
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