Mus pahari (shrew mouse): 110331953
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Entry
110331953 CDS
T05929
Symbol
Trpv1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1 isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04080
Neuroactive ligand-receptor interaction
mpah04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110331953 (Trpv1)
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
110331953 (Trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mpah04040
]
110331953 (Trpv1)
Ion channels [BR:
mpah04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
110331953 (Trpv1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
110331953
NCBI-ProteinID:
XP_021068496
Ensembl:
MGP_PahariEiJ_G0017825
LinkDB
All DBs
Position
14:41017874..41045134
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AA seq
839 aa
AA seq
DB search
MEKRASLDSDEPEPLPQENSCPDPPDRDPNSKPPPAKPHIFATRSRTRLFGKGDSEEASP
MDCPYEEGGLASCPIITVSSVVTLQRPMDGPTCLRQASQDSVSTGAETSPRLYDRRSIFD
AVAQSNCQELESLLSFLQKSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDI
ARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMALVTLLVENGADVQAAANGDFFKKT
KGRPGFYFGELPLSLAACTNQLTIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTA
DNTKFVTNMYNEILILGAKLHPTLKLEELTNKKGLTPLALAASSGKIGVLAYILQREIHE
PECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEVIAYSSSETPNRHDMLLVEPLN
RLLQDKWDRFVKRIFYFNFFVYCLYMIIFTTAAYYRPVEGLPPYKLNNTVGDYFRVTGEI
LSVLGGVYFFFRGIQYFLQRRPSLKSLFVDSYSEILFFVQSLFMLVSVVLYFSQCKEYVA
SMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYLVFLFGFSTAVVTLI
EDGKNNSLPVESPPHKCRGSACRTDNSYNSLYSTCLELFKFTIGMGDLEFTENYDFKAVF
IILLLAYVILTYILLLNMLIALMGETVNKIAQESKNIWKLQRAITILDTEKSFLKCMRKA
FRSGKLLQVGFTPDGKDDFRWCFRVDEVNWTTWNTNVGIINEDPGNCEGVKRTLSFSLRS
GRVSGRNWKNFALVPLLRDASTRDRHSTQPEEVQLKHYTGSLKPEDAEVFKDSMAPGEK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacgggctagcttagactcggatgaacctgagcccctaccccaagagaactcc
tgcccggaccctcctgacagagaccccaactccaagccgcctccagccaagccccacatc
tttgctaccaggagtcgaacccggctttttgggaagggtgactcagaggaggcctctccc
atggactgcccttatgaggaaggcgggctggcctcctgccctatcatcactgtcagctct
gttgtcactctccagaggcctatggatggacctacctgtctcaggcaggcatcccaggac
tccgtctccactggtgctgagacgtccccaaggctctatgatcgcaggagcatcttcgac
gctgtggctcagagtaactgccaggagctggagagcctgctgtccttcctgcagaagagc
aagaagcgcctgactgatagcgagttcaaagacccagagacgggaaagacctgtctgctc
aaagccatgctcaatctgcacaatgggcagaatgacaccatcgctctgctcctggacatt
gcccggaagacagacagcctgaagcagtttgtaaatgccagctacacagacagctactac
aagggccagacagcactgcacattgccattgaaaggcggaacatggcactggtgaccctc
ttggtggagaatggagcagatgtccaggctgctgctaatggggacttcttcaagaaaacc
aaagggaggcctggcttctactttggtgagctgcccctgtccctggccgcgtgtaccaac
cagctgaccattgtgaagttcctgctacagaactcctggcagccagcggacatcagtgcg
cgggattcggtgggcaacacggtgctgcacgccctggtggaggtggcagataacacagcc
gacaacaccaagttcgtgacaaacatgtacaacgagatcctgatcctgggggccaaactc
caccccacgctgaagctagaagaactcaccaacaagaaggggctcacgccgctggctctg
gctgctagcagtgggaagatcggggtcttggcctacattctccagagggagatccatgaa
ccggagtgccggcacctgtccaggaagttcactgaatgggcctatgggcccgtgcactcc
tccctttatgacctgtcctgcattgacacctgtgagaagaactcagtgttggaggtgatc
gcctacagcagcagtgagacccctaaccgccacgacatgcttctcgtggagcccttgaac
cgactcctacaggacaagtgggacagatttgtcaagcgcatcttctacttcaacttcttc
gtctactgcttgtatatgatcatcttcaccacggctgcttactatcggcccgtggaaggc
ttgcccccctataagctgaataacaccgttggggactatttccgtgtcactggagagatc
ctgtctgtgttaggaggagtctacttcttcttccgagggatacagtatttcctgcagagg
cgaccatccctcaagagtttgtttgtggacagctacagtgagatactcttctttgtacag
tcgctcttcatgctggtgtctgtggtactgtacttcagccaatgcaaggagtatgtggct
tccatggtgttttccctggccatgggctggaccaacatgctctactacacccgaggattc
cagcagatgggcatctatgctgtcatgattgagaagatgatcctcagagacctgtgtcgg
tttatgttcgtctacctcgtgttcttgtttggattttccacagccgtagtgacactgatt
gaggatgggaagaataactcactgcctgtggagtccccaccacacaagtgtcggggatct
gcctgcaggacagataactcttacaacagtctgtattccacatgtctggagctgttcaag
ttcaccattggcatgggcgacctggagttcaccgagaactatgacttcaaggctgtcttc
atcatcctgttactggcctatgtgattctcacctacatcctcctgctcaacatgctcatt
gctctcatgggtgagactgtcaacaagattgcacaagagagcaagaacatctggaagctg
cagcgagccatcaccatcctggatacagagaagagtttcctgaagtgcatgaggaaggcc
ttccgctccggcaagctgctgcaggtgggcttcacgccggacggcaaggatgacttccgg
tggtgcttcagggtggatgaggtgaactggactacctggaacaccaatgtgggcatcatc
aacgaggacccaggcaactgtgagggcgtcaagcgcaccctgagcttctccctgcggtca
ggccgagtttcagggagaaactggaagaactttgccctggttccccttctgagggatgca
agcactcgagatagacacagcacccagccggaagaagttcaactgaagcactatacggga
tcccttaagccagaggatgctgaggtcttcaaggattccatggccccaggggagaaatga
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