Mus pahari (shrew mouse): 110332270
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Entry
110332270 CDS
T05929
Symbol
Hdac5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04371
Apelin signaling pathway
mpah04613
Neutrophil extracellular trap formation
mpah05034
Alcoholism
mpah05203
Viral carcinogenesis
mpah05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
110332270 (Hdac5)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
110332270 (Hdac5)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
110332270 (Hdac5)
05203 Viral carcinogenesis
110332270 (Hdac5)
09165 Substance dependence
05034 Alcoholism
110332270 (Hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpah03036
]
110332270 (Hdac5)
Enzymes [BR:
mpah01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
110332270 (Hdac5)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
110332270 (Hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
TFIIA
Motif
Other DBs
NCBI-GeneID:
110332270
NCBI-ProteinID:
XP_021069048
Ensembl:
MGP_PahariEiJ_G0018373
LinkDB
All DBs
Position
14:complement(69643770..69678551)
Genome browser
AA seq
1122 aa
AA seq
DB search
MLLVPKAQGLVEMLQTIYETESCFSADGMSGREPSLEILPRTPLHSIPVAVEVKPVLPGA
MPSSMGGGGGGSPSPVELRGALAGPMDPALREQQLQQELLVLKQQQQLQKQLLFAEFQKQ
HDHLTRQHEVQLQKHLKQQQEMLAAKRQQELEQQRQREQQRQEELEKQRLEQQLLILRNK
EKSKESAIASTEVKLRLQEFLLSKSKEPTPGGLNHSLPQHPKCWGAHHASLDQSSPPQSG
PPGTPPSYKLPLLGPYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVI
STFKKRAVEITGTGPGVSSVCNSAPGSGPSSPNSSHSTIAENGFTGSVPNIPTEMIPQHR
ALPLDSSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAERQALQSLRQG
STLTGKFMSTSSIPGCLLGVALEGDTSPHGHASLLQHVLLLEQARQQSTLIAVPLHGQSP
LVTGERVATSMRTVGKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQKQQQMQ
LGKILTKTGELSRQPTTHPEETEEELTEQQEALLGEGALTMPREGSTESESTQEDLEEEE
EEEEEEEEEDCIQVKDEDGESGPDEGPDLEESSAGYKKLFADAQQLQPLQVYQAPLSLAT
VPHQALGRTQSSPAAPGSMKSPTDQPTVVKHLFTTGVVYDTFMLKHQCMCGNTHVHPEHA
GRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLL
GPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIR
PPGHHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYNDPSVL
YISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPI
AQEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDL
TAICDASEACVSALLSVELQPLDEAVLQQKPSVNAVATLERVIEIQSKHWSCVQRFAAGL
GCSLREAQTGEKEEAETVSAMALLSVGAEQAQAVATQEHSPR
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggtgcccaaggcacaggggcttgtggagatgctgcagaccatctatgagacg
gagtcctgtttctcagcagatggcatgtcaggccgggaaccatccttggaaatcctgcca
cggacccctctgcacagcatccctgtggcagtggaggtgaagcctgtgctgccaggagcc
atgcctagttccatgggaggtggaggcggaggtagccccagccccgtggagcttcggggg
gctctggcgggtcccatggaccctgcgctccgggagcagcagctgcagcaagagctcctg
gtcctcaagcagcagcagcagctccagaagcagctcctgtttgccgagttccagaagcag
catgaccacctgacgcggcagcacgaggtccagctgcagaagcacctcaagcagcagcag
gagatgctggcggctaagaggcagcaggagctggagcagcagcggcagcgggagcagcag
cggcaggaggagctggagaaacagcggctggagcagcagctgctcatcctgcgcaacaag
gaaaagagcaaagagagtgccatcgccagcaccgaggtaaagctgaggctccaggaattc
ctgttgtccaagtcaaaggagcccacgcccggcggcctcaaccattccctcccacagcat
cccaaatgctggggagcccaccacgcttctttggaccagagttcccctccccagagcggc
cctcctgggacgcctccctcctacaaattgcctttgcttgggccctatgacagccgtgat
gactttcccctccgtaaaacggcctcggaacccaacttaaaagtacgttcgaggctaaaa
cagaaggtagcggagaggagaagcagtcccctcctgcgtcggaaggacggcactgttatt
agtacttttaagaagagagcagttgagatcacaggcacggggcctggggtgtcgtccgtg
tgtaacagtgcgcccggctctggccccagctctcccaacagttcccacagcaccatcgct
gagaacggctttactggctcagtccccaacatccccactgagatgatccctcagcaccgg
gccctccctctggacagttccccaaaccagttcagcctctacacgtctccttctctaccc
aacatctccctagggctgcaggccactgtcactgtcaccaactcgcacctcaccgcctcc
ccgaagctgtcaacacagcaggaggctgagaggcaggcccttcagtccctgcggcagggc
agcacactgaccggcaagttcatgagcacatcctccatccctggctgcctgctgggagtg
gcactggagggcgacacaagcccccatgggcacgcttccctgctgcagcacgttttgctg
ctggagcaggcccggcaacagagcacgctcatagcagtgccactccatgggcagtcccca
ttggtgacgggtgaacgtgtggccaccagcatgaggacggtgggtaagctgccgaggcac
cgacctctgagccgcactcagtcctccccactgccgcagagtccccaggccctgcagcag
ctggtcatgcagcagcagcaccagcagttcctagagaagcagaagcagcagcagatgcag
ctgggcaagatccttaccaaaactggggagctgtcaaggcagcccaccactcaccctgag
gagacagaggaggagctgacagaacagcaggaggccttgctgggagagggggccctgacc
atgccccgggaaggctctacagaaagtgagagcacccaggaagacctagaagaggaggag
gaggaggaggaggaagaagaggaggaggactgcattcaggtcaaggatgaggatggcgag
agtggtcctgatgagggccctgacttagaagagtccagtgctggttacaaaaagttgttc
gcagatgcccagcagttacagcccctccaggtgtaccaggcacccctcagcctggccact
gtgcctcatcaggccttgggccgcacccagtcctcacctgctgctcctgggagcatgaag
agccccacagaccaacccactgtggtgaagcacctcttcaccacaggtgtggtctatgac
acgttcatgctgaagcatcaatgtatgtgcggaaacacacacgtgcacccagagcacgcc
ggccgcatccagagcatctggtcccggctgcaggaaactggcctgctcagcaagtgtgag
cggatccggggtcgtaaagccacactggatgaaatccagaccgtgcactctgagtaccac
accctgctctatgggaccagcccccttaaccggcagaagctggacagcaagaagctgctt
ggccccatcagccagaagatgtatgccatgctgccctgtgggggcatcggggtggacagt
gacacggtgtggaacgagatgcactcctctagtgccgttcgaatggcagtgggctgcctg
gtggagctggccttcaaggtggctgcaggagagctcaagaatggatttgctatcatccgg
cccccaggacaccatgctgaagagtccacagccatgggattctgcttcttcaactctgtc
gccatcacagcgaaactcctgcagcagaagctgagcgtgggcaaggtcctcatcgtggac
tgggacattcaccatggcaacggcacccagcaagcattctacaacgacccctccgtgctc
tacatctccctgcatcgctacgacaacgggaacttctttccaggctctggggctcctgaa
gaggttggtggagggccaggtgtggggtacaacgtaaatgtggcgtggacaggaggtgtg
gatccccccattggagatgtggaatacctgacagccttcaggacagtggtgatgcccatt
gcccaggagttctcacctgacgtcgtcctagtctccgctgggtttgatgctgttgaagga
catctgtctccactgggtggctattctgtcaccgccagatgttttgggcacttgaccagg
cagctcatgacactggcggggggccgggtggtgttggccctggagggaggccacgacttg
accgccatctgtgatgcctctgaggcctgtgtctcggctctgctcagcgtggagctgcag
cccttggatgaagcagtcttgcagcaaaagcccagcgtcaatgcggttgccacactagag
agagtcatcgagatccagagcaaacactggagctgcgtacagaggtttgccgctggtctg
ggctgctcgctgcgggaggctcagacaggtgagaaagaggaggccgagactgtgagcgcc
atggccctgctttccgtgggggctgagcaggcccaggctgttgccactcaagagcacagc
cccaggtaa
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